RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 SYCP1Q15431 976 aa15.9■□□□□ 0.14
SPG7-213ENST00000566221 LRIT3Q3SXY7 679 aa15.9■□□□□ 0.14
SPG7-213ENST00000566221 TRIM65Q6PJ69 517 aa15.9■□□□□ 0.14
SPG7-213ENST00000566221 KCNT2Q6UVM3 1135 aa15.9■□□□□ 0.14
SPG7-213ENST00000566221 EHBP1Q8NDI1 1231 aa15.9■□□□□ 0.14
SPG7-213ENST00000566221 C3orf58Q8NDZ4 430 aa15.9■□□□□ 0.14
SPG7-213ENST00000566221 LMO3Q8TAP4 145 aa15.9■□□□□ 0.14
SPG7-213ENST00000566221 RABGGTAQ92696 567 aa15.9■□□□□ 0.14
SPG7-213ENST00000566221 NT5C1BQ96P26 610 aa15.9■□□□□ 0.14
SPG7-213ENST00000566221 PRDM6Q9NQX0 595 aa15.9■□□□□ 0.14
SPG7-213ENST00000566221 MSRAQ9UJ68 235 aa15.9■□□□□ 0.14
SPG7-213ENST00000566221 ADAM28Q9UKQ2 775 aa15.9■□□□□ 0.14
SPG7-213ENST00000566221 PCDHB12Q9Y5F1 795 aa15.9■□□□□ 0.14
SPG7-213ENST00000566221 LINC01553A4QN01 128 aa15.89■□□□□ 0.13
SPG7-213ENST00000566221 KPNA7A9QM74 516 aa15.89■□□□□ 0.13
SPG7-213ENST00000566221 AP5Z1O43299 807 aa15.89■□□□□ 0.13
SPG7-213ENST00000566221 CA3P07451 260 aa15.89■□□□□ 0.13
SPG7-213ENST00000566221 LINC00271P0C7V0 271 aa15.89■□□□□ 0.13
SPG7-213ENST00000566221 P4HA1P13674 534 aa15.89■□□□□ 0.13
SPG7-213ENST00000566221 PON1P27169 355 aa15.89■□□□□ 0.13
SPG7-213ENST00000566221 PBX3P40426 434 aa15.89■□□□□ 0.13
SPG7-213ENST00000566221 AARSP49588 968 aaKnown RBP eCLIP15.89■□□□□ 0.13
SPG7-213ENST00000566221 LILRA4P59901 499 aa15.89■□□□□ 0.13
SPG7-213ENST00000566221 ZNF667Q5HYK9 610 aa15.89■□□□□ 0.13
SPG7-213ENST00000566221 SCARA3Q6AZY7 606 aa15.89■□□□□ 0.13
SPG7-213ENST00000566221 HASPINQ8TF76 798 aa15.89■□□□□ 0.13
SPG7-213ENST00000566221 FAXDC2Q96IV6 333 aa15.89■□□□□ 0.13
SPG7-213ENST00000566221 SAMD11Q96NU1 681 aa15.89■□□□□ 0.13
SPG7-213ENST00000566221 PI4K2AQ9BTU6 479 aa15.89■□□□□ 0.13
SPG7-213ENST00000566221 PBX4Q9BYU1 374 aa15.89■□□□□ 0.13
SPG7-213ENST00000566221 NIF3L1Q9GZT8 377 aa15.89■□□□□ 0.13
SPG7-213ENST00000566221 MARCH5Q9NX47 278 aa15.89■□□□□ 0.13
SPG7-213ENST00000566221 SPG21Q9NZD8 308 aa15.89■□□□□ 0.13
SPG7-213ENST00000566221 SIK3Q9Y2K2 1263 aa15.89■□□□□ 0.13
SPG7-213ENST00000566221 ATG2AQ2TAZ0 1938 aa15.89■□□□□ 0.13
SPG7-213ENST00000566221 SF3B1O75533 1304 aaKnown RBP eCLIP15.89■□□□□ 0.132e-12■■■■■ 215.4
SPG7-213ENST00000566221 MYO9BQ13459 2157 aa15.89■□□□□ 0.13
SPG7-213ENST00000566221 CHD9Q3L8U1 2897 aa15.89■□□□□ 0.13
SPG7-213ENST00000566221 ARHGEF37A1IGU5 675 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 F8W810 466 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 SPTLC1O15269 473 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 TRAPPC3O43617 180 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 ITGB1P05556 798 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 MYOGP15173 224 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 SLC9A1P19634 815 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 RFX1P22670 979 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 CTNNB1P35222 781 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 PBX1P40424 430 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 ZNF75DP51815 510 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 TNNC1P63316 161 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 SMAD3P84022 425 aaKnown RBP15.88■□□□□ 0.13
SPG7-213ENST00000566221 KCNMA1Q12791 1236 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 ELAVL2Q12926 359 aaKnown RBP15.88■□□□□ 0.13
SPG7-213ENST00000566221 WDR72Q3MJ13 1102 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 SPOPLQ6IQ16 392 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 SLC39A11Q8N1S5 342 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 IGSF21Q96ID5 467 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 SUSD3Q96L08 255 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 FAM81BQ96LP2 452 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 PCMTD1Q96MG8 357 aaPredicted RBP15.88■□□□□ 0.13
SPG7-213ENST00000566221 LSM14BQ9BX40 385 aaKnown RBP15.88■□□□□ 0.13
SPG7-213ENST00000566221 PLCB1Q9NQ66 1216 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 GDAP2Q9NXN4 497 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 APEX2Q9UBZ4 518 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 YBX2Q9Y2T7 364 aaKnown RBP15.88■□□□□ 0.13
SPG7-213ENST00000566221 DAAM1Q9Y4D1 1078 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 UNC80Q8N2C7 3258 aa15.88■□□□□ 0.13
SPG7-213ENST00000566221 NT5C1B-RDH14C9J2C7 533 aa15.87■□□□□ 0.13
SPG7-213ENST00000566221 LRRN2O75325 713 aa15.87■□□□□ 0.13
SPG7-213ENST00000566221 TADA2AO75478 443 aa15.87■□□□□ 0.13
SPG7-213ENST00000566221 ODC1P11926 461 aa15.87■□□□□ 0.13
SPG7-213ENST00000566221 TBXAS1P24557 533 aaPredicted RBP15.87■□□□□ 0.13
SPG7-213ENST00000566221 PBX2P40425 430 aa15.87■□□□□ 0.13
SPG7-213ENST00000566221 LRMPQ12912 555 aa15.87■□□□□ 0.13
SPG7-213ENST00000566221 FUT10Q6P4F1 479 aa15.87■□□□□ 0.13
SPG7-213ENST00000566221 CD300LGQ6UXG3 332 aa15.87■□□□□ 0.13
SPG7-213ENST00000566221 DSTYKQ6XUX3 929 aa15.87■□□□□ 0.13
SPG7-213ENST00000566221 TMEM173Q86WV6 379 aaPredicted RBP15.87■□□□□ 0.13
SPG7-213ENST00000566221 NEK11Q8NG66 645 aa15.87■□□□□ 0.13
SPG7-213ENST00000566221 BCL7CQ8WUZ0 217 aaPredicted RBP15.87■□□□□ 0.13
SPG7-213ENST00000566221 TMEM169Q96HH4 297 aa15.87■□□□□ 0.13
SPG7-213ENST00000566221 MRFAP1L1Q96HT8 127 aa15.87■□□□□ 0.13
SPG7-213ENST00000566221 TGS1Q96RS0 853 aaKnown RBP15.87■□□□□ 0.13
SPG7-213ENST00000566221 PLVAPQ9BX97 442 aa15.87■□□□□ 0.13
SPG7-213ENST00000566221 APOBEC3GQ9HC16 384 aaKnown RBP15.87■□□□□ 0.13
SPG7-213ENST00000566221 SIX2Q9NPC8 291 aa15.87■□□□□ 0.13
SPG7-213ENST00000566221 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.87■□□□□ 0.13
SPG7-213ENST00000566221 FAM207AQ9NSI2 230 aaPredicted RBP15.87■□□□□ 0.13
SPG7-213ENST00000566221 NXF1Q9UBU9 619 aaKnown RBP15.87■□□□□ 0.13
SPG7-213ENST00000566221 STK39Q9UEW8 545 aa15.87■□□□□ 0.13
SPG7-213ENST00000566221 SNX9Q9Y5X1 595 aa15.87■□□□□ 0.13
SPG7-213ENST00000566221 ITIH6Q6UXX5 1313 aa15.87■□□□□ 0.13
SPG7-213ENST00000566221 MYH10P35580 1976 aa15.86■□□□□ 0.13
SPG7-213ENST00000566221 M0QZQ0 153 aa15.86■□□□□ 0.13
SPG7-213ENST00000566221 HUS1O60921 280 aa15.86■□□□□ 0.13
SPG7-213ENST00000566221 DNAJB2P25686 324 aa15.86■□□□□ 0.13
SPG7-213ENST00000566221 BMPR1AP36894 532 aa15.86■□□□□ 0.13
SPG7-213ENST00000566221 ASPAP45381 313 aa15.86■□□□□ 0.13
SPG7-213ENST00000566221 BRCC3P46736 316 aa15.86■□□□□ 0.13
SPG7-213ENST00000566221 KLK7P49862 253 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms