RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 C11orf74Q86VG3 221 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 BPHLQ86WA6 291 aaPredicted RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 BMP2KQ9NSY1 1161 aaPredicted RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 CAMTA2O94983 1202 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 FAM13AO94988 1023 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 HOXB6P17509 224 aaKnown RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 TRPC1P48995 793 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 LAMC2Q13753 1193 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 CTC1Q2NKJ3 1217 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 AAGABQ6PD74 315 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 IZUMO2Q6UXV1 221 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 RBM44Q6ZP01 1051 aaKnown RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 LARGE2Q8N3Y3 721 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 EGLN2Q96KS0 407 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 LY9Q9HBG7 655 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 CABP5Q9NP86 173 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 ACEP12821 1306 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 TOM1O60784 492 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 DEXIO95424 95 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 PCYT1AP49585 367 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 PPATQ06203 517 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 GFPT1Q06210 699 aaPredicted RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 TMEM67Q5HYA8 995 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 PGM2L1Q6PCE3 622 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 DCLRE1AQ6PJP8 1040 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 EEF2KMTQ96G04 330 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 VMP1Q96GC9 406 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 ZNF594Q96JF6 807 aaPredicted RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 RUNDC3BQ96NL0 473 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 EIF2AQ9BY44 585 aaKnown RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 SYNDIG1Q9H7V2 258 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 NINJ2Q9NZG7 142 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 TMOD2Q9NZR1 351 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 H0YCG3 227 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 MATN2O00339 956 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 BRAFP15056 766 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 PDE6AP16499 860 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 DNAJA1P31689 397 aaKnown RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 PTGDRQ13258 359 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 TRIM50Q86XT4 487 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 PDSS2Q86YH6 399 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 TMIEQ8NEW7 156 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 TTLL13PA6NNM8 815 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 TTLL8A6PVC2 850 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 GIPC1O14908 333 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 MAPK13O15264 365 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 CSDE1O75534 798 aaKnown RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 BAIAP3O94812 1187 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 AMPD1P23109 780 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 PICALMQ13492 652 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 CTTNQ14247 550 aaKnown RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 COL19A1Q14993 1142 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 SLC9C1Q4G0N8 1177 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 MPRIPQ6WCQ1 1025 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 PRELID2Q8N945 189 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 TTLL11Q8NHH1 800 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 LNX1Q8TBB1 728 aaPredicted RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 NACC2Q96BF6 587 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 NMD3Q96D46 503 aaKnown RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 VPS50Q96JG6 964 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 SYT11Q9BT88 431 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 ADAM33Q9BZ11 813 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 BLOC1S4Q9NUP1 217 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 TAS2R1Q9NYW7 299 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 CLIC5Q9NZA1 410 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 COX16Q9P0S2 106 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 CEPT1Q9Y6K0 416 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 SPEF2Q9C093 1822 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 FUOMA2VDF0 154 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 RNMTO43148 476 aaKnown RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 RIPK2O43353 540 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 ZBED4O75132 1171 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 CBX6O95503 412 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 FDX1P10109 184 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 BCAP31P51572 246 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 PLTPP55058 493 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 LRRC14Q15048 493 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 TMTC3Q6ZXV5 915 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 IRF2BP2Q7Z5L9 587 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 NT5DC3Q86UY8 548 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 SLC22A15Q8IZD6 547 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 VGLL2Q8N8G2 317 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 ZNF557Q8N988 423 aaPredicted RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 TPCN2Q8NHX9 752 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 GIPC2Q8TF65 315 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 BCAP29Q9UHQ4 241 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 A0A1W2PQ72 361 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 GPR89AB7ZAQ6 455 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 hCG_1984214I3L0E3 225 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 PHF2O75151 1096 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 ZPR1O75312 459 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 GPR89BP0CG08 455 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 RARBP10826 455 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 CRABP2P29373 138 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 RPL21P46778 160 aaKnown RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 CEBPGP53567 150 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 YARSP54577 528 aaKnown RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 ACTR3P61158 418 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 CCDC142Q17RM4 750 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms