RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 BACE2Q9Y5Z0 518 aa22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 HCFC2Q9Y5Z7 792 aa22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 BICDL2A1A5D9 508 aa22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 CETN3O15182 167 aa22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 TBX10O75333 385 aa22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 POLR2BP30876 1174 aaKnown RBP22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 LTBRP36941 435 aa22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 MRPL58Q14197 206 aaKnown RBP22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 SV2CQ496J9 727 aa22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 LMBRD2Q68DH5 695 aaPredicted RBP22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 ANKRD40Q6AI12 368 aa22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 RBM43Q6ZSC3 357 aaKnown RBP22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 FAM186BQ8IYM0 893 aa22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 VN1R2Q8NFZ6 395 aa22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 PLEKHO2Q8TD55 490 aa22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 IKBKBO14920 756 aa22.72■■□□□ 1.23
SHCBP1-205ENST00000566016 SPTLC1O15269 473 aa22.72■■□□□ 1.23
SHCBP1-205ENST00000566016 SLC16A3O15427 465 aaKnown RBP22.72■■□□□ 1.23
SHCBP1-205ENST00000566016 LINC01565O15544 149 aa22.72■■□□□ 1.23
SHCBP1-205ENST00000566016 TYMPP19971 482 aa22.72■■□□□ 1.23
SHCBP1-205ENST00000566016 CLCN4P51793 760 aa22.72■■□□□ 1.23
SHCBP1-205ENST00000566016 RBP5P82980 135 aa22.72■■□□□ 1.23
SHCBP1-205ENST00000566016 AAK1Q2M2I8 961 aa22.72■■□□□ 1.23
SHCBP1-205ENST00000566016 VARS2Q5ST30 1063 aaKnown RBP22.72■■□□□ 1.23
SHCBP1-205ENST00000566016 TTI2Q6NXR4 508 aa22.72■■□□□ 1.23
SHCBP1-205ENST00000566016 PRSS55Q6UWB4 352 aaPredicted RBP22.72■■□□□ 1.23
SHCBP1-205ENST00000566016 CSGALNACT2Q8N6G5 542 aa22.72■■□□□ 1.23
SHCBP1-205ENST00000566016 SLC22A17Q8WUG5 538 aa22.72■■□□□ 1.23
SHCBP1-205ENST00000566016 ATXN2LQ8WWM7 1075 aaKnown RBP22.72■■□□□ 1.23
SHCBP1-205ENST00000566016 CASP10Q92851 521 aa22.72■■□□□ 1.23
SHCBP1-205ENST00000566016 PRDM6Q9NQX0 595 aa22.72■■□□□ 1.23
SHCBP1-205ENST00000566016 LRRIQ3A6PVS8 624 aaPredicted RBP22.71■■□□□ 1.23
SHCBP1-205ENST00000566016 CYP11A1P05108 521 aa22.71■■□□□ 1.23
SHCBP1-205ENST00000566016 ODC1P11926 461 aa22.71■■□□□ 1.23
SHCBP1-205ENST00000566016 KLRC2P26717 231 aa22.71■■□□□ 1.23
SHCBP1-205ENST00000566016 PAK1Q13153 545 aa22.71■■□□□ 1.23
SHCBP1-205ENST00000566016 TRAPPC11Q7Z392 1133 aa22.71■■□□□ 1.23
SHCBP1-205ENST00000566016 MLKLQ8NB16 471 aa22.71■■□□□ 1.23
SHCBP1-205ENST00000566016 NELFBQ8WX92 580 aa22.71■■□□□ 1.23
SHCBP1-205ENST00000566016 POP1Q99575 1024 aaKnown RBP22.71■■□□□ 1.23
SHCBP1-205ENST00000566016 CLSTN3Q9BQT9 956 aa22.71■■□□□ 1.23
SHCBP1-205ENST00000566016 OXCT2Q9BYC2 517 aaPredicted RBP22.71■■□□□ 1.23
SHCBP1-205ENST00000566016 AGAP1Q9UPQ3 857 aa22.71■■□□□ 1.23
SHCBP1-205ENST00000566016 TRIM49BA6NDI0 452 aa22.7■■□□□ 1.22
SHCBP1-205ENST00000566016 KPNA7A9QM74 516 aa22.7■■□□□ 1.22
SHCBP1-205ENST00000566016 H7C4K7 107 aa22.7■■□□□ 1.22
SHCBP1-205ENST00000566016 TBC1D4O60343 1298 aa22.7■■□□□ 1.22
SHCBP1-205ENST00000566016 OAZ2O95190 189 aa22.7■■□□□ 1.22
SHCBP1-205ENST00000566016 EPB41P11171 864 aaKnown RBP22.7■■□□□ 1.22
SHCBP1-205ENST00000566016 KCNA5P22460 613 aa22.7■■□□□ 1.22
SHCBP1-205ENST00000566016 VAMP7P51809 220 aa22.7■■□□□ 1.22
SHCBP1-205ENST00000566016 BFSP1Q12934 665 aa22.7■■□□□ 1.22
SHCBP1-205ENST00000566016 KLHL10Q6JEL2 608 aa22.7■■□□□ 1.22
SHCBP1-205ENST00000566016 DSTYKQ6XUX3 929 aa22.7■■□□□ 1.22
SHCBP1-205ENST00000566016 BORCS6Q96GS4 357 aa22.7■■□□□ 1.22
SHCBP1-205ENST00000566016 MSLNLQ96KJ4 702 aa22.7■■□□□ 1.22
SHCBP1-205ENST00000566016 FAM84AQ96KN4 292 aa22.7■■□□□ 1.22
SHCBP1-205ENST00000566016 SENP8Q96LD8 212 aa22.7■■□□□ 1.22
SHCBP1-205ENST00000566016 CEP63Q96MT8 703 aa22.7■■□□□ 1.22
SHCBP1-205ENST00000566016 DZANK1Q9NVP4 752 aa22.7■■□□□ 1.22
SHCBP1-205ENST00000566016 GDAP2Q9NXN4 497 aa22.7■■□□□ 1.22
SHCBP1-205ENST00000566016 CLEC1BQ9P126 229 aa22.7■■□□□ 1.22
SHCBP1-205ENST00000566016 DPP7Q9UHL4 492 aa22.7■■□□□ 1.22
SHCBP1-205ENST00000566016 DSEQ9UL01 958 aa22.7■■□□□ 1.22
SHCBP1-205ENST00000566016 R3HCC1Q9Y3T6 440 aaKnown RBP22.7■■□□□ 1.22
SHCBP1-205ENST00000566016 TULP1O00294 542 aaPredicted RBP22.69■■□□□ 1.22
SHCBP1-205ENST00000566016 GLUD1P00367 558 aa22.69■■□□□ 1.22
SHCBP1-205ENST00000566016 KRT13P13646 458 aa22.69■■□□□ 1.22
SHCBP1-205ENST00000566016 HOXB8P17481 243 aaPredicted RBP22.69■■□□□ 1.22
SHCBP1-205ENST00000566016 YWHAHQ04917 246 aaPredicted RBP22.69■■□□□ 1.22
SHCBP1-205ENST00000566016 DLX2Q07687 328 aaPredicted RBP22.69■■□□□ 1.22
SHCBP1-205ENST00000566016 MYO1EQ12965 1108 aa22.69■■□□□ 1.22
SHCBP1-205ENST00000566016 LEXMQ3ZCV2 418 aa22.69■■□□□ 1.22
SHCBP1-205ENST00000566016 SLC8B1Q6J4K2 584 aa22.69■■□□□ 1.22
SHCBP1-205ENST00000566016 ZNF280DQ6N043 979 aa22.69■■□□□ 1.22
SHCBP1-205ENST00000566016 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.69■■□□□ 1.22
SHCBP1-205ENST00000566016 ZNF516Q92618 1163 aa22.69■■□□□ 1.22
SHCBP1-205ENST00000566016 CTNND2Q9UQB3 1225 aa22.69■■□□□ 1.22
SHCBP1-205ENST00000566016 VCANP13611 3396 aa22.69■■□□□ 1.22
SHCBP1-205ENST00000566016 STAU1O95793 577 aaKnown RBP22.68■■□□□ 1.22
SHCBP1-205ENST00000566016 KRT19P08727 400 aa22.68■■□□□ 1.22
SHCBP1-205ENST00000566016 RBM10P98175 930 aaKnown RBP22.68■■□□□ 1.22
SHCBP1-205ENST00000566016 ELMSAN1Q6PJG2 1045 aa22.68■■□□□ 1.22
SHCBP1-205ENST00000566016 HDAC7Q8WUI4 952 aa22.68■■□□□ 1.22
SHCBP1-205ENST00000566016 BARX2Q9UMQ3 279 aaPredicted RBP22.68■■□□□ 1.22
SHCBP1-205ENST00000566016 C5orf42Q9H799 3197 aa22.68■■□□□ 1.22
SHCBP1-205ENST00000566016 TTC28Q96AY4 2481 aa22.68■■□□□ 1.22
SHCBP1-205ENST00000566016 RPL17P18621 184 aaKnown RBP22.67■■□□□ 1.22
SHCBP1-205ENST00000566016 DLG4P78352 724 aa22.67■■□□□ 1.22
SHCBP1-205ENST00000566016 MRPS5P82675 430 aaKnown RBP22.67■■□□□ 1.22
SHCBP1-205ENST00000566016 RAB33AQ14088 237 aa22.67■■□□□ 1.22
SHCBP1-205ENST00000566016 ZACNQ401N2 412 aa22.67■■□□□ 1.22
SHCBP1-205ENST00000566016 C1orf220Q5T0J3 134 aa22.67■■□□□ 1.22
SHCBP1-205ENST00000566016 TDRD10Q5VZ19 366 aaKnown RBP22.67■■□□□ 1.22
SHCBP1-205ENST00000566016 LILRA6Q6PI73 481 aa22.67■■□□□ 1.22
SHCBP1-205ENST00000566016 EP400NLQ6ZTU2 488 aa22.67■■□□□ 1.22
SHCBP1-205ENST00000566016 SMRP1Q8NCR6 262 aa22.67■■□□□ 1.22
SHCBP1-205ENST00000566016 SPATA18Q8TC71 538 aa22.67■■□□□ 1.22
SHCBP1-205ENST00000566016 EEF2KMTQ96G04 330 aa22.67■■□□□ 1.22
SHCBP1-205ENST00000566016 DUSP9Q99956 384 aaKnown RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms