RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 INPP5FQ9Y2H2 1132 aa20.1■□□□□ 0.81
COMMD4-213ENST00000565834 TRIM43BA6NCK2 446 aa20.09■□□□□ 0.81
COMMD4-213ENST00000565834 PIRO00625 290 aa20.09■□□□□ 0.81
COMMD4-213ENST00000565834 PPEF2O14830 753 aa20.09■□□□□ 0.81
COMMD4-213ENST00000565834 AKR1B10O60218 316 aa20.09■□□□□ 0.81
COMMD4-213ENST00000565834 ACO1P21399 889 aaKnown RBP20.09■□□□□ 0.81
COMMD4-213ENST00000565834 LRPAP1P30533 357 aa20.09■□□□□ 0.81
COMMD4-213ENST00000565834 PNPLA4P41247 253 aa20.09■□□□□ 0.81
COMMD4-213ENST00000565834 KIF11P52732 1056 aa20.09■□□□□ 0.81
COMMD4-213ENST00000565834 YWHAEP62258 255 aaKnown RBP20.09■□□□□ 0.81
COMMD4-213ENST00000565834 TNNC1P63316 161 aa20.09■□□□□ 0.81
COMMD4-213ENST00000565834 PTK2Q05397 1052 aa20.09■□□□□ 0.81
COMMD4-213ENST00000565834 TRIM43Q96BQ3 446 aaPredicted RBP20.09■□□□□ 0.81
COMMD4-213ENST00000565834 DESI2Q9BSY9 194 aa20.09■□□□□ 0.81
COMMD4-213ENST00000565834 BCO2Q9BYV7 579 aa20.09■□□□□ 0.81
COMMD4-213ENST00000565834 ELAC1Q9H777 363 aaKnown RBP20.09■□□□□ 0.81
COMMD4-213ENST00000565834 PCDHB4Q9Y5E5 795 aa20.09■□□□□ 0.81
COMMD4-213ENST00000565834 INPPL1O15357 1258 aa20.08■□□□□ 0.81
COMMD4-213ENST00000565834 CYP26A1O43174 497 aa20.08■□□□□ 0.81
COMMD4-213ENST00000565834 IPO7O95373 1038 aaKnown RBP20.08■□□□□ 0.81
COMMD4-213ENST00000565834 POMCP01189 267 aa20.08■□□□□ 0.81
COMMD4-213ENST00000565834 RAG1P15918 1043 aa20.08■□□□□ 0.81
COMMD4-213ENST00000565834 GRIK3Q13003 919 aa20.08■□□□□ 0.81
COMMD4-213ENST00000565834 NAB2Q15742 525 aa20.08■□□□□ 0.81
COMMD4-213ENST00000565834 CNKSR3Q6P9H4 555 aa20.08■□□□□ 0.81
COMMD4-213ENST00000565834 ZNF571Q7Z3V5 609 aaPredicted RBP20.08■□□□□ 0.81
COMMD4-213ENST00000565834 VPS36Q86VN1 386 aa20.08■□□□□ 0.81
COMMD4-213ENST00000565834 C17orf53Q8N3J3 647 aaPredicted RBP20.08■□□□□ 0.81
COMMD4-213ENST00000565834 UBR7Q8N806 425 aa20.08■□□□□ 0.81
COMMD4-213ENST00000565834 PCDHB7Q9Y5E2 793 aa20.08■□□□□ 0.81
COMMD4-213ENST00000565834 EIF3CLB5ME19 914 aaKnown RBP20.07■□□□□ 0.8
COMMD4-213ENST00000565834 WEE2P0C1S8 567 aa20.07■□□□□ 0.8
COMMD4-213ENST00000565834 ANXA13P27216 316 aa20.07■□□□□ 0.8
COMMD4-213ENST00000565834 CLCN1P35523 988 aa20.07■□□□□ 0.8
COMMD4-213ENST00000565834 ASTE1Q2TB18 679 aaPredicted RBP20.07■□□□□ 0.8
COMMD4-213ENST00000565834 SMYD5Q6GMV2 418 aa20.07■□□□□ 0.8
COMMD4-213ENST00000565834 EIF3CQ99613 913 aaKnown RBP20.07■□□□□ 0.8
COMMD4-213ENST00000565834 CISHQ9NSE2 258 aa20.07■□□□□ 0.8
COMMD4-213ENST00000565834 SPTLC3Q9NUV7 552 aa20.07■□□□□ 0.8
COMMD4-213ENST00000565834 PPP2R2CQ9Y2T4 447 aa20.07■□□□□ 0.8
COMMD4-213ENST00000565834 ADGRG1Q9Y653 693 aa20.07■□□□□ 0.8
COMMD4-213ENST00000565834 CCP110O43303 1012 aa20.07■□□□□ 0.8
COMMD4-213ENST00000565834 CCDC175P0C221 793 aa20.07■□□□□ 0.8
COMMD4-213ENST00000565834 CD58P19256 250 aa20.07■□□□□ 0.8
COMMD4-213ENST00000565834 ITGB8P26012 769 aa20.07■□□□□ 0.8
COMMD4-213ENST00000565834 TAF6P49848 677 aa20.07■□□□□ 0.8
COMMD4-213ENST00000565834 IKBKEQ14164 716 aa20.07■□□□□ 0.8
COMMD4-213ENST00000565834 CLLU1OSQ5K130 101 aa20.07■□□□□ 0.8
COMMD4-213ENST00000565834 TMEM270Q6UE05 265 aa20.07■□□□□ 0.8
COMMD4-213ENST00000565834 CCAR2Q8N163 923 aaKnown RBP20.07■□□□□ 0.8
COMMD4-213ENST00000565834 ACRBPQ8NEB7 543 aa20.07■□□□□ 0.8
COMMD4-213ENST00000565834 URGCPQ8TCY9 931 aa20.07■□□□□ 0.8
COMMD4-213ENST00000565834 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.07■□□□□ 0.8
COMMD4-213ENST00000565834 SMYD3Q9H7B4 428 aa20.07■□□□□ 0.8
COMMD4-213ENST00000565834 CYP3A43Q9HB55 503 aa20.07■□□□□ 0.8
COMMD4-213ENST00000565834 RNF216Q9NWF9 866 aaPredicted RBP20.07■□□□□ 0.8
COMMD4-213ENST00000565834 LRFN2Q9ULH4 789 aa20.07■□□□□ 0.8
COMMD4-213ENST00000565834 CNTN6Q9UQ52 1028 aa20.07■□□□□ 0.8
COMMD4-213ENST00000565834 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.06■□□□□ 0.8
COMMD4-213ENST00000565834 ZSCAN12O43309 604 aa20.06■□□□□ 0.8
COMMD4-213ENST00000565834 FGFR1P11362 822 aa20.06■□□□□ 0.8
COMMD4-213ENST00000565834 PDE6CP51160 858 aa20.06■□□□□ 0.8
COMMD4-213ENST00000565834 BPIFB4P59827 614 aa20.06■□□□□ 0.8
COMMD4-213ENST00000565834 SPA17Q15506 151 aa20.06■□□□□ 0.8
COMMD4-213ENST00000565834 SV2CQ496J9 727 aa20.06■□□□□ 0.8
COMMD4-213ENST00000565834 MFSD5Q6N075 450 aa20.06■□□□□ 0.8
COMMD4-213ENST00000565834 SLC47A2Q86VL8 602 aa20.06■□□□□ 0.8
COMMD4-213ENST00000565834 TMEM199Q8N511 208 aa20.06■□□□□ 0.8
COMMD4-213ENST00000565834 RBBP8NLQ8NC74 664 aaPredicted RBP20.06■□□□□ 0.8
COMMD4-213ENST00000565834 EPS8L1Q8TE68 723 aa20.06■□□□□ 0.8
COMMD4-213ENST00000565834 MMS19Q96T76 1030 aa20.06■□□□□ 0.8
COMMD4-213ENST00000565834 KCND1Q9NSA2 647 aa20.06■□□□□ 0.8
COMMD4-213ENST00000565834 TRMT1Q9NXH9 659 aaKnown RBP20.06■□□□□ 0.8
COMMD4-213ENST00000565834 SNX9Q9Y5X1 595 aa20.06■□□□□ 0.8
COMMD4-213ENST00000565834 LTBP2Q14767 1821 aa20.05■□□□□ 0.8
COMMD4-213ENST00000565834 MKI67P46013 3256 aaKnown RBP20.05■□□□□ 0.8
COMMD4-213ENST00000565834 RPL9P32969 192 aaKnown RBP20.05■□□□□ 0.8
COMMD4-213ENST00000565834 RAP1GAPP47736 663 aa20.05■□□□□ 0.8
COMMD4-213ENST00000565834 KRT83P78385 493 aa20.05■□□□□ 0.8
COMMD4-213ENST00000565834 TUSC3Q13454 348 aa20.05■□□□□ 0.8
COMMD4-213ENST00000565834 NOMO2Q5JPE7 1267 aa20.05■□□□□ 0.8
COMMD4-213ENST00000565834 ABI1Q8IZP0 508 aa20.05■□□□□ 0.8
COMMD4-213ENST00000565834 SDCBP2Q9H190 292 aa20.05■□□□□ 0.8
COMMD4-213ENST00000565834 ADAMTS1Q9UHI8 967 aa20.05■□□□□ 0.8
COMMD4-213ENST00000565834 CASTOR2A6NHX0 329 aa20.04■□□□□ 0.8
COMMD4-213ENST00000565834 KPNA7A9QM74 516 aa20.04■□□□□ 0.8
COMMD4-213ENST00000565834 PODXLO00592 558 aa20.04■□□□□ 0.8
COMMD4-213ENST00000565834 HOXA2O43364 376 aa20.04■□□□□ 0.8
COMMD4-213ENST00000565834 LCA5LO95447 670 aa20.04■□□□□ 0.8
COMMD4-213ENST00000565834 CSF2RAP15509 400 aa20.04■□□□□ 0.8
COMMD4-213ENST00000565834 CYP11B1P15538 503 aa20.04■□□□□ 0.8
COMMD4-213ENST00000565834 CDH8P55286 799 aa20.04■□□□□ 0.8
COMMD4-213ENST00000565834 GFPT1Q06210 699 aaPredicted RBP20.04■□□□□ 0.8
COMMD4-213ENST00000565834 BMS1Q14692 1282 aaKnown RBP20.04■□□□□ 0.8
COMMD4-213ENST00000565834 SLC18A3Q16572 532 aa20.04■□□□□ 0.8
COMMD4-213ENST00000565834 VWCEQ96DN2 955 aa20.04■□□□□ 0.8
COMMD4-213ENST00000565834 AGPAT1Q99943 283 aa20.04■□□□□ 0.8
COMMD4-213ENST00000565834 SYT11Q9BT88 431 aa20.04■□□□□ 0.8
COMMD4-213ENST00000565834 FAM124BQ9H5Z6 455 aaPredicted RBP20.04■□□□□ 0.8
COMMD4-213ENST00000565834 ACP6Q9NPH0 428 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms