RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.1□□□□□ -1.59
LINC00561-201ENST00000565815 SNX33Q8WV41 574 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 LRRC37BQ96QE4 947 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 UIMC1Q96RL1 719 aa5.1□□□□□ -1.59
LINC00561-201ENST00000565815 ZMAT3Q9HA38 289 aaKnown RBP5.1□□□□□ -1.59
LINC00561-201ENST00000565815 N4BP2Q86UW6 1770 aaPredicted RBP5.1□□□□□ -1.59
LINC00561-201ENST00000565815 ITGB4P16144 1822 aa5.09□□□□□ -1.59
LINC00561-201ENST00000565815 FTLP02792 175 aaPredicted RBP5.09□□□□□ -1.59
LINC00561-201ENST00000565815 KCNA3P22001 575 aa5.09□□□□□ -1.59
LINC00561-201ENST00000565815 SLURP1P55000 103 aa5.09□□□□□ -1.59
LINC00561-201ENST00000565815 RRP1P56182 461 aaKnown RBP5.09□□□□□ -1.59
LINC00561-201ENST00000565815 IRX6P78412 446 aaPredicted RBP5.09□□□□□ -1.59
LINC00561-201ENST00000565815 GTF2H3Q13889 308 aa5.09□□□□□ -1.59
LINC00561-201ENST00000565815 CCAR1Q8IX12 1150 aaKnown RBP5.09□□□□□ -1.59
LINC00561-201ENST00000565815 PQLC1Q8N2U9 271 aa5.09□□□□□ -1.59
LINC00561-201ENST00000565815 FATE1Q969F0 183 aa5.09□□□□□ -1.59
LINC00561-201ENST00000565815 MPHOSPH6Q99547 160 aaKnown RBP5.09□□□□□ -1.59
LINC00561-201ENST00000565815 NUP88Q99567 741 aaPredicted RBP5.09□□□□□ -1.59
LINC00561-201ENST00000565815 WNT8AQ9H1J5 351 aa5.09□□□□□ -1.59
LINC00561-201ENST00000565815 SLC23A1Q9UHI7 598 aa5.09□□□□□ -1.59
LINC00561-201ENST00000565815 KIR2DL3P43628 341 aa5.09□□□□□ -1.6
LINC00561-201ENST00000565815 MEOX1P50221 254 aa5.09□□□□□ -1.6
LINC00561-201ENST00000565815 COBLL1Q53SF7 1204 aa5.09□□□□□ -1.6
LINC00561-201ENST00000565815 MFSD14BQ5SR56 506 aa5.09□□□□□ -1.6
LINC00561-201ENST00000565815 NT5DC1Q5TFE4 455 aa5.09□□□□□ -1.6
LINC00561-201ENST00000565815 GPR135Q8IZ08 494 aa5.09□□□□□ -1.6
LINC00561-201ENST00000565815 TRMT2AQ8IZ69 625 aaKnown RBP5.09□□□□□ -1.6
LINC00561-201ENST00000565815 IFNL2Q8IZJ0 200 aa5.09□□□□□ -1.6
LINC00561-201ENST00000565815 GPR156Q8NFN8 814 aa5.09□□□□□ -1.6
LINC00561-201ENST00000565815 SLC39A13Q96H72 371 aa5.09□□□□□ -1.6
LINC00561-201ENST00000565815 TMX3Q96JJ7 454 aa5.09□□□□□ -1.6
LINC00561-201ENST00000565815 ADAM29Q9UKF5 820 aa5.09□□□□□ -1.6
LINC00561-201ENST00000565815 POLHQ9Y253 713 aa5.09□□□□□ -1.6
LINC00561-201ENST00000565815 FLT4P35916 1363 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 RPTORQ8N122 1335 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 SCN4AP35499 1836 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 B3GALT2O43825 422 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 GYS1P13807 737 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 XPAP23025 273 aaPredicted RBP5.08□□□□□ -1.6
LINC00561-201ENST00000565815 ANO4Q32M45 955 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 KLHDC10Q6PID8 442 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 NPNTQ6UXI9 565 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.08□□□□□ -1.6
LINC00561-201ENST00000565815 PIGBQ92521 554 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 GCDHQ92947 438 aaPredicted RBP5.08□□□□□ -1.6
LINC00561-201ENST00000565815 UHRF1Q96T88 793 aaPredicted RBP5.08□□□□□ -1.6
LINC00561-201ENST00000565815 C1orf43Q9BWL3 253 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 MRPS18AQ9NVS2 196 aaKnown RBP5.08□□□□□ -1.6
LINC00561-201ENST00000565815 THSD7BQ9C0I4 1608 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 A0A1W2PP64 1363 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 KDRP35968 1356 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 PASKQ96RG2 1323 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 C8AP07357 584 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 HTR1BP28222 390 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 SLC6A4P31645 630 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 MAP2K2P36507 400 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 CSRP2Q16527 193 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 DEFB115Q30KQ5 88 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 CCDC149Q6ZUS6 474 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 CXXC5Q7LFL8 322 aaKnown RBP5.08□□□□□ -1.6
LINC00561-201ENST00000565815 PPP1R3BQ86XI6 285 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 NGEFQ8N5V2 710 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 PLA2G15Q8NCC3 412 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 PMM1Q92871 262 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 C7orf25Q9BPX7 421 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 CARD11Q9BXL7 1154 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 ABCF2Q9UG63 623 aa5.08□□□□□ -1.6
LINC00561-201ENST00000565815 DICER1Q9UPY3 1922 aaKnown RBP5.08□□□□□ -1.6
LINC00561-201ENST00000565815 DLEC1Q9Y238 1755 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 PMM2O15305 246 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 AHSGP02765 367 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 PTPN7P35236 360 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 RAB1AP62820 205 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 FLYWCH1Q4VC44 716 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 KHDC1Q4VXA5 237 aaKnown RBP5.07□□□□□ -1.6
LINC00561-201ENST00000565815 AFMIDQ63HM1 303 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 MIGA2Q7L4E1 593 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 ADGRE4PQ86SQ3 457 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 IFI44Q8TCB0 444 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 LTV1Q96GA3 475 aaPredicted RBP5.07□□□□□ -1.6
LINC00561-201ENST00000565815 AJUBAQ96IF1 538 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 OR10A2Q9H208 303 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 ATP6V0A4Q9HBG4 840 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 RCAN3Q9UKA8 241 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 SLC5A1P13866 664 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 CFPP27918 469 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 ECHS1P30084 290 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 TM4SF1P30408 202 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 GPR15P49685 360 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 ADCY7P51828 1080 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 LBX1P52954 281 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 SLC16A1P53985 500 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 PER3P56645 1201 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 GBX1Q14549 363 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 USP10Q14694 798 aaKnown RBP5.07□□□□□ -1.6
LINC00561-201ENST00000565815 KRT40Q6A162 431 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 USP30Q70CQ3 517 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 DENND1CQ8IV53 801 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 HDAC10Q969S8 669 aa5.07□□□□□ -1.6
LINC00561-201ENST00000565815 CLPTM1LQ96KA5 538 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms