RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	C11orf70	Q9BRQ4	267 aa		13.98	□□□□□ -0.17
SCAPER-215	ENST00000565507	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.98	□□□□□ -0.17
SCAPER-215	ENST00000565507	ATP6V0A4	Q9HBG4	840 aa		13.98	□□□□□ -0.17
SCAPER-215	ENST00000565507	KIAA1586	Q9HCI6	787 aa		13.98	□□□□□ -0.17
SCAPER-215	ENST00000565507	FGFR1OP2	Q9NVK5	253 aa		13.98	□□□□□ -0.17
SCAPER-215	ENST00000565507	EURL	Q9NYK6	297 aa		13.98	□□□□□ -0.17
SCAPER-215	ENST00000565507	LGALS13	Q9UHV8	139 aa		13.98	□□□□□ -0.17
SCAPER-215	ENST00000565507	SBF1	O95248	1867 aa		13.98	□□□□□ -0.17
SCAPER-215	ENST00000565507	GH1	P01241	217 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	PSAP	P07602	524 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	TNNI1	P19237	187 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	KLRC2	P26717	231 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	ATP5D	P30049	168 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	ACOT2	P49753	483 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	PRKCE	Q02156	737 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	TMEM132B	Q14DG7	1078 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	TMEM63B	Q5T3F8	832 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	PLEKHA7	Q6IQ23	1121 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	ABHD15	Q6UXT9	468 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	CCDC50	Q8IVM0	306 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	REPS2	Q8NFH8	660 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	MAGEC3	Q8TD91	643 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	CKAP2	Q8WWK9	683 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	SCLT1	Q96NL6	688 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	OSBPL8	Q9BZF1	889 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	AGAP1	Q9UPQ3	857 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	LIG4	P49917	911 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	FSTL1	Q12841	308 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	CUL2	Q13617	745 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	WLS	Q5T9L3	541 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	SNRNP48	Q6IEG0	339 aa	Known RBP	13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	PHF13	Q86YI8	300 aa	Predicted RBP	13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	PASD1	Q8IV76	773 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	KCNN1	Q92952	543 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	VCPIP1	Q96JH7	1222 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	IFT74	Q96LB3	600 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	FNBP1	Q96RU3	617 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	MLXIPL	Q9NP71	852 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	ADAM22	Q9P0K1	906 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	CNTN6	Q9UQ52	1028 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	NAALADL1	Q9UQQ1	740 aa		13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	USP15	Q9Y4E8	981 aa	Predicted RBP	13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.97	□□□□□ -0.17
SCAPER-215	ENST00000565507	DKC1	O60832	514 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	BRAF	P15056	766 aa		13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	PIK3CA	P42336	1068 aa		13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	ACTR2	P61160	394 aa		13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	GALNTL6	Q49A17	601 aa		13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	CCDC91	Q7Z6B0	441 aa		13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	PRUNE1	Q86TP1	453 aa		13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	CCDC89	Q8N998	374 aa		13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	DYDC1	Q8WWB3	177 aa		13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	JPH1	Q9HDC5	661 aa	Predicted RBP	13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	GINM1	Q9NU53	330 aa		13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	SLC9A2	Q9UBY0	812 aa		13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	AGO2	Q9UKV8	859 aa	Known RBP	13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	ZNF214	Q9UL59	606 aa	Predicted RBP	13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	SNCAIP	Q9Y6H5	919 aa		13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	NFASC	O94856	1347 aa		13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507		H0YCG3	227 aa		13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	SP4	Q02446	784 aa		13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	PREPL	Q4J6C6	727 aa	Predicted RBP	13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	FAM133B	Q5BKY9	247 aa	Known RBP	13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	ZBTB41	Q5SVQ8	909 aa		13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	LIN9	Q5TKA1	542 aa		13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	HIBCH	Q6NVY1	386 aa	Predicted RBP	13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	TMEM270	Q6UE05	265 aa		13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	TRIM72	Q6ZMU5	477 aa		13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	EXD1	Q8NHP7	514 aa		13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	ZBTB45	Q96K62	511 aa	Predicted RBP	13.96	□□□□□ -0.17
SCAPER-215	ENST00000565507	DOCK1	Q14185	1865 aa		13.96	□□□□□ -0.18
SCAPER-215	ENST00000565507	KIAA1217	Q5T5P2	1943 aa		13.96	□□□□□ -0.18
SCAPER-215	ENST00000565507	CDH16	O75309	829 aa		13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	UBOX5	O94941	541 aa		13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	GJB6	O95452	261 aa		13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	CD58	P19256	250 aa		13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	GNA15	P30679	374 aa		13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	SSTR3	P32745	418 aa	Predicted RBP	13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	IZUMO3	Q5VZ72	239 aa		13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	NUGGC	Q68CJ6	796 aa		13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	SCARA3	Q6AZY7	606 aa		13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	PLCD3	Q8N3E9	789 aa		13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	ANKRD42	Q8N9B4	389 aa		13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	NSUN6	Q8TEA1	469 aa	Known RBP	13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	NCAPG	Q9BPX3	1015 aa		13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	MRPL47	Q9HD33	250 aa	Known RBP	13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	KCNK9	Q9NPC2	374 aa		13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	AFG3L2	Q9Y4W6	797 aa		13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	PARP14	Q460N5	1801 aa		13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	RLF	Q13129	1914 aa		13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	COL11A1	P12107	1806 aa	Predicted RBP	13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	TLR3	O15455	904 aa	Known RBP	13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	ATP4A	P20648	1035 aa		13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	ATP13A4	Q4VNC1	1196 aa		13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	ZNF365	Q70YC5	407 aa		13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	CCDC63	Q8NA47	563 aa		13.95	□□□□□ -0.18
SCAPER-215	ENST00000565507	BBOF1	Q8ND07	529 aa		13.95	□□□□□ -0.18

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