RNA–Protein interactions for RNA: ENST00000565503.5

RPUSD1-206, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 3

Gene RPUSD1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-206ENST00000565503 HIP1RO75146 1068 aa23.31■■□□□ 1.32
RPUSD1-206ENST00000565503 CPB1P15086 417 aa23.31■■□□□ 1.32
RPUSD1-206ENST00000565503 CCNE1P24864 410 aa23.31■■□□□ 1.32
RPUSD1-206ENST00000565503 TRAPPC10P48553 1259 aa23.31■■□□□ 1.32
RPUSD1-206ENST00000565503 RNF19BQ6ZMZ0 732 aa23.31■■□□□ 1.32
RPUSD1-206ENST00000565503 DAW1Q8N136 415 aa23.31■■□□□ 1.32
RPUSD1-206ENST00000565503 BEST2Q8NFU1 509 aa23.31■■□□□ 1.32
RPUSD1-206ENST00000565503 SLITRK6Q9H5Y7 841 aa23.31■■□□□ 1.32
RPUSD1-206ENST00000565503 C8orf33Q9H7E9 229 aaPredicted RBP23.31■■□□□ 1.32
RPUSD1-206ENST00000565503 GREB1Q4ZG55 1949 aa23.31■■□□□ 1.32
RPUSD1-206ENST00000565503 NCANO14594 1321 aa23.31■■□□□ 1.32
RPUSD1-206ENST00000565503 CHADO15335 359 aa23.3■■□□□ 1.32
RPUSD1-206ENST00000565503 MEFVO15553 781 aaPredicted RBP23.3■■□□□ 1.32
RPUSD1-206ENST00000565503 FOXD2O60548 495 aaPredicted RBP23.3■■□□□ 1.32
RPUSD1-206ENST00000565503 GJA1P17302 382 aa23.3■■□□□ 1.32
RPUSD1-206ENST00000565503 MARCKSP29966 332 aaPredicted RBP23.3■■□□□ 1.32
RPUSD1-206ENST00000565503 PLD1Q13393 1074 aa23.3■■□□□ 1.32
RPUSD1-206ENST00000565503 SIM2Q14190 667 aaPredicted RBP23.3■■□□□ 1.32
RPUSD1-206ENST00000565503 GAS6Q14393 721 aa23.3■■□□□ 1.32
RPUSD1-206ENST00000565503 TEAD2Q15562 447 aa23.3■■□□□ 1.32
RPUSD1-206ENST00000565503 YAF2Q8IY57 180 aa23.3■■□□□ 1.32
RPUSD1-206ENST00000565503 C4orf32Q8N8J7 132 aa23.3■■□□□ 1.32
RPUSD1-206ENST00000565503 SHKBP1Q8TBC3 707 aa23.3■■□□□ 1.32
RPUSD1-206ENST00000565503 C8orf76Q96K31 380 aa23.3■■□□□ 1.32
RPUSD1-206ENST00000565503 RAB34Q9BZG1 259 aa23.3■■□□□ 1.32
RPUSD1-206ENST00000565503 DNM3Q9UQ16 869 aa23.3■■□□□ 1.32
RPUSD1-206ENST00000565503 YIPF1Q9Y548 306 aa23.3■■□□□ 1.32
RPUSD1-206ENST00000565503 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.3■■□□□ 1.32
RPUSD1-206ENST00000565503 USP24Q9UPU5 2620 aa23.3■■□□□ 1.32
RPUSD1-206ENST00000565503 M0QZQ0 153 aa23.29■■□□□ 1.32
RPUSD1-206ENST00000565503 OAZ2O95190 189 aa23.29■■□□□ 1.32
RPUSD1-206ENST00000565503 FCHO2Q0JRZ9 810 aa23.29■■□□□ 1.32
RPUSD1-206ENST00000565503 ST3GAL1Q11201 340 aa23.29■■□□□ 1.32
RPUSD1-206ENST00000565503 CSRP2Q16527 193 aa23.29■■□□□ 1.32
RPUSD1-206ENST00000565503 IGSF22Q8N9C0 903 aa23.29■■□□□ 1.32
RPUSD1-206ENST00000565503 SNX29Q8TEQ0 813 aa23.29■■□□□ 1.32
RPUSD1-206ENST00000565503 SEMA4GQ9NTN9 838 aa23.29■■□□□ 1.32
RPUSD1-206ENST00000565503 SDK1Q7Z5N4 2213 aa23.28■■□□□ 1.32
RPUSD1-206ENST00000565503 TOM1L1O75674 476 aa23.28■■□□□ 1.32
RPUSD1-206ENST00000565503 NEK4P51957 841 aa23.28■■□□□ 1.32
RPUSD1-206ENST00000565503 YWHAHQ04917 246 aaPredicted RBP23.28■■□□□ 1.32
RPUSD1-206ENST00000565503 MAPK7Q13164 816 aa23.28■■□□□ 1.32
RPUSD1-206ENST00000565503 NOLC1Q14978 699 aaKnown RBP eCLIP23.28■■□□□ 1.32
RPUSD1-206ENST00000565503 SLC10A6Q3KNW5 377 aa23.28■■□□□ 1.32
RPUSD1-206ENST00000565503 PPM1JQ5JR12 505 aa23.28■■□□□ 1.32
RPUSD1-206ENST00000565503 DGKKQ5KSL6 1271 aa23.28■■□□□ 1.32
RPUSD1-206ENST00000565503 PRR23CQ6ZRP0 262 aa23.28■■□□□ 1.32
RPUSD1-206ENST00000565503 LONP2Q86WA8 852 aa23.28■■□□□ 1.32
RPUSD1-206ENST00000565503 NTPCRQ9BSD7 190 aaKnown RBP23.28■■□□□ 1.32
RPUSD1-206ENST00000565503 TIPINQ9BVW5 301 aa23.28■■□□□ 1.32
RPUSD1-206ENST00000565503 LRRC3Q9BY71 257 aa23.28■■□□□ 1.32
RPUSD1-206ENST00000565503 NOL7Q9UMY1 257 aaKnown RBP23.28■■□□□ 1.32
RPUSD1-206ENST00000565503 KIF26AQ9ULI4 1882 aaPredicted RBP23.28■■□□□ 1.32
RPUSD1-206ENST00000565503 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.27■■□□□ 1.32
RPUSD1-206ENST00000565503 CHURC1-FNTBB4DL54 471 aa23.27■■□□□ 1.32
RPUSD1-206ENST00000565503 HRO43593 1189 aa23.27■■□□□ 1.32
RPUSD1-206ENST00000565503 HARSP12081 509 aaKnown RBP23.27■■□□□ 1.32
RPUSD1-206ENST00000565503 FNTBP49356 437 aa23.27■■□□□ 1.32
RPUSD1-206ENST00000565503 KPNA1P52294 538 aaPredicted RBP23.27■■□□□ 1.32
RPUSD1-206ENST00000565503 EPHB3P54753 998 aa23.27■■□□□ 1.32
RPUSD1-206ENST00000565503 STRN3Q13033 797 aa23.27■■□□□ 1.32
RPUSD1-206ENST00000565503 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.27■■□□□ 1.32
RPUSD1-206ENST00000565503 TMC8Q8IU68 726 aa23.27■■□□□ 1.32
RPUSD1-206ENST00000565503 RSPRY1Q96DX4 576 aa23.27■■□□□ 1.32
RPUSD1-206ENST00000565503 ZBTB45Q96K62 511 aaPredicted RBP23.27■■□□□ 1.32
RPUSD1-206ENST00000565503 RUSC1Q9BVN2 902 aa23.27■■□□□ 1.32
RPUSD1-206ENST00000565503 PLEKHA5Q9HAU0 1116 aa23.27■■□□□ 1.32
RPUSD1-206ENST00000565503 TUBGCP4Q9UGJ1 667 aa23.27■■□□□ 1.32
RPUSD1-206ENST00000565503 KCNG1Q9UIX4 513 aa23.27■■□□□ 1.32
RPUSD1-206ENST00000565503 A0A1W2PRU2 124 aa23.26■■□□□ 1.31
RPUSD1-206ENST00000565503 E9PMD0 336 aa23.26■■□□□ 1.31
RPUSD1-206ENST00000565503 K7ESF4 209 aa23.26■■□□□ 1.31
RPUSD1-206ENST00000565503 SLC16A4O15374 487 aa23.26■■□□□ 1.31
RPUSD1-206ENST00000565503 LRPAP1P30533 357 aa23.26■■□□□ 1.31
RPUSD1-206ENST00000565503 RINT1Q6NUQ1 792 aa23.26■■□□□ 1.31
RPUSD1-206ENST00000565503 C1orf186Q6ZWK4 172 aa23.26■■□□□ 1.31
RPUSD1-206ENST00000565503 RALGPS2Q86X27 583 aaPredicted RBP23.26■■□□□ 1.31
RPUSD1-206ENST00000565503 SPIRE2Q8WWL2 714 aa23.26■■□□□ 1.31
RPUSD1-206ENST00000565503 ANKFY1Q9P2R3 1169 aa23.26■■□□□ 1.31
RPUSD1-206ENST00000565503 ASB3Q9Y575 518 aa23.26■■□□□ 1.31
RPUSD1-206ENST00000565503 ANK1P16157 1881 aa23.26■■□□□ 1.31
RPUSD1-206ENST00000565503 CHD6Q8TD26 2715 aa23.25■■□□□ 1.31
RPUSD1-206ENST00000565503 MYBPHLA2RUH7 354 aa23.25■■□□□ 1.31
RPUSD1-206ENST00000565503 OR6C75A6NL08 312 aa23.25■■□□□ 1.31
RPUSD1-206ENST00000565503 SLC38A8A6NNN8 435 aa23.25■■□□□ 1.31
RPUSD1-206ENST00000565503 VNN2O95498 520 aa23.25■■□□□ 1.31
RPUSD1-206ENST00000565503 HOXA6P31267 233 aa23.25■■□□□ 1.31
RPUSD1-206ENST00000565503 AARSP49588 968 aaKnown RBP eCLIP23.25■■□□□ 1.31
RPUSD1-206ENST00000565503 DMWDQ09019 674 aa23.25■■□□□ 1.31
RPUSD1-206ENST00000565503 GPR17Q13304 367 aa23.25■■□□□ 1.31
RPUSD1-206ENST00000565503 GNL2Q13823 731 aaKnown RBP23.25■■□□□ 1.31
RPUSD1-206ENST00000565503 KRT79Q5XKE5 535 aa23.25■■□□□ 1.31
RPUSD1-206ENST00000565503 ZPBP2Q6X784 338 aa23.25■■□□□ 1.31
RPUSD1-206ENST00000565503 FBXO18Q8NFZ0 1043 aa23.25■■□□□ 1.31
RPUSD1-206ENST00000565503 LLPHQ9BRT6 129 aaKnown RBP23.25■■□□□ 1.31
RPUSD1-206ENST00000565503 DNAJC25Q9H1X3 360 aa23.25■■□□□ 1.31
RPUSD1-206ENST00000565503 RBM12Q9NTZ6 932 aaKnown RBP23.25■■□□□ 1.31
RPUSD1-206ENST00000565503 CFAP47Q6ZTR5 3102 aa23.25■■□□□ 1.31
RPUSD1-206ENST00000565503 SPECC1L-ADORA2AF8WAN1 911 aa23.24■■□□□ 1.31
RPUSD1-206ENST00000565503 FGF19O95750 216 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms