RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 KCNK12Q9HB15 430 aa14.77□□□□□ -0.05
VPS9D1-204ENST00000565023 STYXL1Q9Y6J8 313 aa14.77□□□□□ -0.05
VPS9D1-204ENST00000565023 NOTCH4Q99466 2003 aa14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 TSC2P49815 1807 aa14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 FRMD3A2A2Y4 597 aa14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 NARSO43776 548 aaKnown RBP14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 SEC24AO95486 1093 aa14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 WNT7BP56706 349 aa14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 AMPD3Q01432 767 aa14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 YWHAHQ04917 246 aaPredicted RBP14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 C9orf57Q5W0N0 161 aa14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 SLC8B1Q6J4K2 584 aa14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 ARMCX5Q6P1M9 558 aa14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 CRELD2Q6UXH1 353 aaPredicted RBP14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 EFCAB13Q8IY85 973 aa14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 UBALD2Q8IYN6 164 aa14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 GRAMD1CQ8IYS0 662 aa14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 ZNF461Q8TAF7 563 aa14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 ITFG1Q8TB96 612 aa14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 ASIC4Q96FT7 647 aa14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 SENP8Q96LD8 212 aa14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 PGLYRP2Q96PD5 576 aa14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 GDPD2Q9HCC8 539 aa14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 KBTBD4Q9NVX7 518 aa14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 DPP3Q9NY33 737 aa14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 CHMP5Q9NZZ3 219 aa14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 DNMT3BQ9UBC3 853 aaKnown RBP14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 ZDBF2Q9HCK1 2354 aa14.76□□□□□ -0.05
VPS9D1-204ENST00000565023 FAM237AA0A1B0GTK4 181 aa14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 A0A1W2PQ27 194 aa14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 A0A1W2PQ64 194 aa14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 A0A1W2PQD8 194 aa14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 SPTLC1O15269 473 aa14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 ADRB2P07550 413 aa14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 LAMP2P13473 410 aa14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 TFAMQ00059 246 aaKnown RBP14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 ADCY1Q08828 1119 aa14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 TDGQ13569 410 aa14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 ALCAMQ13740 583 aa14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 MRPL58Q14197 206 aaKnown RBP14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 UVSSAQ2YD98 709 aa14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 PABPC1LQ4VXU2 614 aaKnown RBP14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 RNF19BQ6ZMZ0 732 aa14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 STXBP4Q6ZWJ1 553 aa14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 NELFCDQ8IXH7 590 aa14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 FBXL6Q8N531 539 aa14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 PYM1Q9BRP8 204 aaKnown RBP14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 RHOBTB2Q9BYZ6 727 aa14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 MFSD1Q9H3U5 465 aa14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 ASB7Q9H672 318 aa14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 RBAKQ9NYW8 714 aaPredicted RBP14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 SERTAD1Q9UHV2 236 aa14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 FBXL21Q9UKT6 434 aa14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 KCNH3Q9ULD8 1083 aa14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 HPSEQ9Y251 543 aa14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 KMT2EQ8IZD2 1858 aa14.75□□□□□ -0.05
VPS9D1-204ENST00000565023 M0QZQ0 153 aa14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 TBC1D4O60343 1298 aa14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 ABLIM3O94929 683 aa14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 IL18RAPO95256 599 aa14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 CFHP08603 1231 aa14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 ODC1P11926 461 aa14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 HOXA9P31269 272 aa14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 VCPP55072 806 aaKnown RBP14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 LILRA4P59901 499 aa14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 FAM26FQ5R3K3 315 aa14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 LMBRD2Q68DH5 695 aaPredicted RBP14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 OVOS1Q6IE37 1185 aa14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 BMP8AQ7Z5Y6 402 aa14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 BRSK2Q8IWQ3 736 aa14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 TSPAN18Q96SJ8 248 aa14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 TMEM209Q96SK2 561 aa14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 C7orf25Q9BPX7 421 aa14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 CORO1BQ9BR76 489 aa14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 TMEM206Q9H813 350 aa14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 MAGEF1Q9HAY2 307 aa14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 IGSF9Q9P2J2 1179 aa14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 EPS15L1Q9UBC2 864 aa14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 DERAQ9Y315 318 aa14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 MRPS23Q9Y3D9 190 aaKnown RBP14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 INSL5Q9Y5Q6 135 aa14.74□□□□□ -0.05
VPS9D1-204ENST00000565023 A0A1B0GVL5 298 aa14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 PIRO00625 290 aa14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 LDHAP00338 332 aaKnown RBP14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 RHOP08100 348 aa14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 ATF2P15336 505 aa14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 PFKFB1P16118 471 aa14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 GARTP22102 1010 aa14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 POLR2BP30876 1174 aaKnown RBP14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 AARSP49588 968 aaKnown RBP eCLIP14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 TAF6P49848 677 aa14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 TWF1Q12792 350 aa14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 CUL4BQ13620 913 aa14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 UNC13DQ70J99 1090 aa14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 CEP57L1Q8IYX8 460 aa14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 GPD1LQ8N335 351 aa14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 FLCNQ8NFG4 579 aa14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 FGF13Q92913 245 aa14.73□□□□□ -0.05
VPS9D1-204ENST00000565023 MCRS1Q96EZ8 462 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms