RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 TSPAN18Q96SJ8 248 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 FGFBP2Q9BYJ0 223 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 MRPL44Q9H9J2 332 aaKnown RBP10.89□□□□□ -0.67
CMTM3-209ENST00000565003 SLC2A4RGQ9NR83 387 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 SEL1LQ9UBV2 794 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 AFF4Q9UHB7 1163 aaKnown RBP10.89□□□□□ -0.67
CMTM3-209ENST00000565003 AGO2Q9UKV8 859 aaKnown RBP10.89□□□□□ -0.67
CMTM3-209ENST00000565003 KCNH3Q9ULD8 1083 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 CA14Q9ULX7 337 aa10.89□□□□□ -0.67
CMTM3-209ENST00000565003 MRPS23Q9Y3D9 190 aaKnown RBP10.89□□□□□ -0.67
CMTM3-209ENST00000565003 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.89□□□□□ -0.67
CMTM3-209ENST00000565003 ANO9A1A5B4 782 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 XPOTO43592 962 aaKnown RBP10.88□□□□□ -0.67
CMTM3-209ENST00000565003 OAZ2O95190 189 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 GCNT3O95395 438 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 OR4Q2P0C623 313 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 IDEP14735 1019 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 CPB1P15086 417 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 CEBPBP17676 345 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 GAP43P17677 238 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 CCR2P41597 374 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 WNT7BP56706 349 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 LILRA4P59901 499 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 TMEM132DQ14C87 1099 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 L1TD1Q5T7N2 865 aaKnown RBP10.88□□□□□ -0.67
CMTM3-209ENST00000565003 FOXD4L5Q5VV16 416 aaPredicted RBP10.88□□□□□ -0.67
CMTM3-209ENST00000565003 SLFN12LQ6IEE8 588 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 DSTYKQ6XUX3 929 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 MTSS1LQ765P7 747 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 EFCAB13Q8IY85 973 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 ZSWIM2Q8NEG5 633 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 FOXD4L4Q8WXT5 416 aaPredicted RBP10.88□□□□□ -0.67
CMTM3-209ENST00000565003 POMGNT1Q8WZA1 660 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 TCEAL4Q96EI5 215 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 KXD1Q9BQD3 176 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 TBC1D17Q9HA65 648 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 AVENQ9NQS1 362 aaPredicted RBP10.88□□□□□ -0.67
CMTM3-209ENST00000565003 ARHGEF3Q9NR81 526 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 OLFML3Q9NRN5 406 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 TFIP11Q9UBB9 837 aaKnown RBP10.88□□□□□ -0.67
CMTM3-209ENST00000565003 DERAQ9Y315 318 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 TSC2P49815 1807 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 COL4A3Q01955 1670 aa10.88□□□□□ -0.67
CMTM3-209ENST00000565003 SCN1AP35498 2009 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 PIRO00625 290 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 SPTLC2O15270 562 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 PPP6R2O75170 966 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 PTPN2P17706 415 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 TYMPP19971 482 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 GPC5P78333 572 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 TWF1Q12792 350 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 E2F4Q16254 413 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 PRSS36Q5K4E3 855 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 USP37Q86T82 979 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 HS6ST3Q8IZP7 471 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 MCRS1Q96EZ8 462 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 SENP8Q96LD8 212 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 PGLYRP2Q96PD5 576 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 ACCSQ96QU6 501 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 TMEM209Q96SK2 561 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 CORO1BQ9BR76 489 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 CRISPLD1Q9H336 500 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 ASB7Q9H672 318 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 PANK4Q9NVE7 773 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 CEP72Q9P209 647 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 EXOC7Q9UPT5 735 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 C2CD2Q9Y426 696 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 YIPF1Q9Y548 306 aa10.87□□□□□ -0.67
CMTM3-209ENST00000565003 OR6C75A6NL08 312 aa10.86□□□□□ -0.67
CMTM3-209ENST00000565003 MOSPD3O75425 235 aa10.86□□□□□ -0.67
CMTM3-209ENST00000565003 YEATS4O95619 227 aa10.86□□□□□ -0.67
CMTM3-209ENST00000565003 ZSCAN22P10073 491 aaPredicted RBP10.86□□□□□ -0.67
CMTM3-209ENST00000565003 ODC1P11926 461 aa10.86□□□□□ -0.67
CMTM3-209ENST00000565003 POU5F1Q01860 360 aaKnown RBP10.86□□□□□ -0.67
CMTM3-209ENST00000565003 PKP1Q13835 747 aa10.86□□□□□ -0.67
CMTM3-209ENST00000565003 POSTNQ15063 836 aa10.86□□□□□ -0.67
CMTM3-209ENST00000565003 FOXD4L6Q3SYB3 417 aaPredicted RBP10.86□□□□□ -0.67
CMTM3-209ENST00000565003 OVOS1Q6IE37 1185 aa10.86□□□□□ -0.67
CMTM3-209ENST00000565003 SHC4Q6S5L8 630 aa10.86□□□□□ -0.67
CMTM3-209ENST00000565003 FOXD4L3Q6VB84 417 aaPredicted RBP10.86□□□□□ -0.67
CMTM3-209ENST00000565003 PDZD4Q76G19 769 aaPredicted RBP10.86□□□□□ -0.67
CMTM3-209ENST00000565003 HSCBQ8IWL3 235 aa10.86□□□□□ -0.67
CMTM3-209ENST00000565003 CCDC105Q8IYK2 499 aa10.86□□□□□ -0.67
CMTM3-209ENST00000565003 TTC9BQ8N6N2 239 aa10.86□□□□□ -0.67
CMTM3-209ENST00000565003 GLIS3Q8NEA6 775 aa10.86□□□□□ -0.67
CMTM3-209ENST00000565003 OR10T2Q8NGX3 314 aa10.86□□□□□ -0.67
CMTM3-209ENST00000565003 ATOH1Q92858 354 aaPredicted RBP10.86□□□□□ -0.67
CMTM3-209ENST00000565003 SAAL1Q96ER3 474 aa10.86□□□□□ -0.67
CMTM3-209ENST00000565003 ZNF396Q96N95 335 aaPredicted RBP10.86□□□□□ -0.67
CMTM3-209ENST00000565003 RTP3Q9BQQ7 232 aa10.86□□□□□ -0.67
CMTM3-209ENST00000565003 CBWD1Q9BRT8 395 aa10.86□□□□□ -0.67
CMTM3-209ENST00000565003 FAM213AQ9BRX8 229 aa10.86□□□□□ -0.67
CMTM3-209ENST00000565003 OXCT2Q9BYC2 517 aaPredicted RBP10.86□□□□□ -0.67
CMTM3-209ENST00000565003 PLA2G2FQ9BZM2 168 aa10.86□□□□□ -0.67
CMTM3-209ENST00000565003 IRF2BPLQ9H1B7 796 aa10.86□□□□□ -0.67
CMTM3-209ENST00000565003 DPP3Q9NY33 737 aa10.86□□□□□ -0.67
CMTM3-209ENST00000565003 GDE1Q9NZC3 331 aa10.86□□□□□ -0.67
CMTM3-209ENST00000565003 MAFFQ9ULX9 164 aa10.86□□□□□ -0.67
CMTM3-209ENST00000565003 MTMR11A4FU01 709 aa10.85□□□□□ -0.67
CMTM3-209ENST00000565003 STK25O00506 426 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms