RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 LRRC8BQ6P9F7 803 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 MYOCDQ8IZQ8 938 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 CHCHD4Q8N4Q1 142 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 WHAMMQ8TF30 809 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 TEKT4Q8WW24 435 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 ATAD3AQ9NVI7 634 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 HCSTQ9UBK5 93 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 STK38LQ9Y2H1 464 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 MFHAS1Q9Y4C4 1052 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 GSTTP1A0A1W2PQM5 241 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 GOLGA8RI6L899 631 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 E2F3O00716 465 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 H2AFYO75367 372 aaKnown RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 USP2O75604 605 aaPredicted RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 ATP11AP98196 1134 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 SPDYE2Q495Y8 402 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 TXNRD3NBQ6F5E7 133 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 TMEM179Q6ZVK1 233 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 CFAP36Q96G28 342 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 MOV10L1Q9BXT6 1211 aaKnown RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 MAK16Q9BXY0 300 aaKnown RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 TMEM206Q9H813 350 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 RNF146Q9NTX7 359 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 SEPT10Q9P0V9 454 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 AP3M1Q9Y2T2 418 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 BHMG1C9JSJ3 638 aaPredicted RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 NPTXRO95502 500 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 NPY2RP49146 381 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 LMAN1P49257 510 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 BCAR1P56945 870 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 RAB42Q8N4Z0 105 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 AVL9Q8NBF6 648 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 MGARPQ8TDB4 240 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 GPR152Q8TDT2 470 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 ATP6V0A1Q93050 837 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 CEP44Q9C0F1 390 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 AMACRQ9UHK6 382 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 PPP1R9AQ9ULJ8 1098 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 COG5Q9UP83 839 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 FER1L6Q2WGJ9 1857 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 VWA5AO00534 786 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 SPAG6O75602 509 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 HEXIM1O94992 359 aaKnown RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 OATP04181 439 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 TNNI1P19237 187 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 RPS12P25398 132 aaKnown RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 PON1P27169 355 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 SLC8A1P32418 973 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 ALDH6A1Q02252 535 aaKnown RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 KIZQ2M2Z5 673 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 FAM178BQ8IXR5 827 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 UBA3Q8TBC4 463 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 CLEC4DQ8WXI8 215 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 UPF1Q92900 1129 aaKnown RBP eCLIP3.55□□□□□ -1.84
CHD9-213ENST00000564845 B3GALT6Q96L58 329 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 CCDC42Q96M95 316 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 KLF6Q99612 283 aaPredicted RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 MINDY3Q9H8M7 445 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 CNOT10Q9H9A5 744 aaKnown RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 RWDD2AQ9UIY3 292 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 PCDHA13Q9Y5I0 950 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 IQCA1LA6NCM1 817 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 MGEA5O60502 916 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 ZSCAN5DPP0CG00 497 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 LONP1P36776 959 aaKnown RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 ARHGDIAP52565 204 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 KLHL30Q0D2K2 578 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 CUL1Q13616 776 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 EMC1Q8N766 993 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 ENOX1Q8TC92 643 aaKnown RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 BHMTQ93088 406 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 MTBPQ96DY7 904 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 NEDD4LQ96PU5 975 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 PARVBQ9HBI1 364 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 STARD13Q9Y3M8 1113 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 DENND3A2RUS2 1198 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 KRT87PA6NCN2 255 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 TULP2O00295 520 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 RHOBTB3O94955 611 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 ADPGKQ9BRR6 497 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 EPS8L2Q9H6S3 715 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 RYDENQ9NUL5 291 aaKnown RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 LAMB1P07942 1786 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 ARHGEF35A5YM69 484 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 TP73O15350 636 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 SMIM24O75264 130 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 ATXN8OSP0DMR3 200 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 MYL4P12829 197 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 HOXA10P31260 410 aaPredicted RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 CARSP49589 748 aaKnown RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 ADCY2Q08462 1091 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 OLIG2Q13516 323 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 TMTC1Q8IUR5 882 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 IFT20Q8IY31 132 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 TERB1Q8NA31 727 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 CHURC1Q8WUH1 139 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 TARS2Q9BW92 718 aaKnown RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 NEUROG2Q9H2A3 272 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 CTNNAL1Q9UBT7 734 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 TKTP29401 623 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms