RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 PRSS36Q5K4E3 855 aa13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 RRAGBQ5VZM2 374 aa13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 DSTYKQ6XUX3 929 aa13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 PDZD4Q76G19 769 aaPredicted RBP13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 ZNF720Q7Z2F6 126 aa13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 PJA1Q8NG27 643 aa13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 E2F7Q96AV8 911 aa13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 MCRS1Q96EZ8 462 aa13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 CORO1BQ9BR76 489 aa13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 ZHX3Q9H4I2 956 aa13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 ZSCAN16Q9H4T2 348 aaPredicted RBP13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 ZFP14Q9HCL3 533 aa13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 DLGAP2Q9P1A6 1054 aa13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 DSEQ9UL01 958 aa13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 C2CD2Q9Y426 696 aa13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 ASB3Q9Y575 518 aa13.23□□□□□ -0.29
GTF3C1-204ENST00000564664 USP34Q70CQ2 3546 aa13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 FAM186AA6NE01 2351 aa13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 PRR23AA6NEV1 266 aa13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 PIRO00625 290 aa13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 NCAM2O15394 837 aa13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 PDIA4P13667 645 aaKnown RBP13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 CPB1P15086 417 aa13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 GAP43P17677 238 aa13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 SYT1P21579 422 aa13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 GRIN1Q05586 938 aa13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 SNW1Q13573 536 aaKnown RBP13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 SLC5A9Q2M3M2 681 aa13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 ADALQ6DHV7 355 aa13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 ARMCX5Q6P1M9 558 aa13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 SV2BQ7L1I2 683 aa13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 NT5DC4Q86YG4 428 aa13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 C1orf210Q8IVY1 113 aa13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 LRRC15Q8TF66 581 aa13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 DNASE1L2Q92874 299 aa13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 EPSTI1Q96J88 318 aa13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 BCO2Q9BYV7 579 aa13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 TRPV5Q9NQA5 729 aa13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 EXOC7Q9UPT5 735 aa13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 MRPS17Q9Y2R5 130 aaKnown RBP13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 CLIC4Q9Y696 253 aa13.22□□□□□ -0.29
GTF3C1-204ENST00000564664 PDCD11Q14690 1871 aaKnown RBP13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 FGF19O95750 216 aa13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 CYP11A1P05108 521 aa13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 ODC1P11926 461 aa13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 NMT1P30419 496 aaKnown RBP13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 EPHB3P54753 998 aa13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 SPAG1Q07617 926 aa13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 TWF1Q12792 350 aa13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 SMARCB1Q12824 385 aa13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 ALCAMQ13740 583 aa13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 TMEM132DQ14C87 1099 aa13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 C9orf57Q5W0N0 161 aa13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 OVOS1Q6IE37 1185 aa13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 JADE1Q6IE81 842 aa13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 SLC39A4Q6P5W5 647 aa13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 ZC3H14Q6PJT7 736 aaKnown RBP13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 RNF19BQ6ZMZ0 732 aa13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 CCDC73Q6ZRK6 1079 aa13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 FRMD5Q7Z6J6 570 aa13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 ING5Q8WYH8 240 aa13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 SMARCD2Q92925 531 aa13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 STRA6Q9BX79 667 aa13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 TRPV4Q9HBA0 871 aa13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 ASAH2Q9NR71 780 aa13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 FBXO2Q9UK22 296 aaPredicted RBP13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 AGO2Q9UKV8 859 aaKnown RBP13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 PCDHB13Q9Y5F0 798 aa13.21□□□□□ -0.29
GTF3C1-204ENST00000564664 ANO9A1A5B4 782 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 FAM170BA6NMN3 283 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 ANKRD63C9JTQ0 380 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 MAN2B1O00754 1011 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 IL18RAPO95256 599 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 LDHAP00338 332 aaKnown RBP13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 DCNP07585 359 aaKnown RBP13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 GLULP15104 373 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 ALDH1A3P47895 512 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 TUFMP49411 452 aaKnown RBP13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 MLLT6P55198 1093 aaPredicted RBP13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 RESTQ13127 1097 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 SLC39A14Q15043 492 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 ZNF528Q3MIS6 628 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 ZBTB41Q5SVQ8 909 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 TANGO2Q6ICL3 276 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 CENPPQ6IPU0 288 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 ZNF852Q6ZMS4 543 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 ASCL5Q7RTU5 278 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 METTL23Q86XA0 190 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 C2orf15Q8WU43 125 aaKnown RBP13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 DEPDC1BQ8WUY9 529 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 IRF7Q92985 503 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 FAM212AQ96EL1 285 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 SENP8Q96LD8 212 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 ASB16Q96NS5 453 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 ACCSQ96QU6 501 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 KXD1Q9BQD3 176 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 TRMT61BQ9BVS5 477 aaKnown RBP13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 MRPL44Q9H9J2 332 aaKnown RBP13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 CEP72Q9P209 647 aa13.2□□□□□ -0.3
GTF3C1-204ENST00000564664 PPP1R37O75864 691 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms