RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 ZNRF3Q9ULT6 936 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 COG5Q9UP83 839 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 SHOC2Q9UQ13 582 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 CD2APQ9Y5K6 639 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 ASTN2O75129 1339 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-249ENST00000564606 FAM47DPA6NHR8 397 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 K7ERI5 159 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 MGRN1O60291 552 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 SNX3O60493 162 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 WFS1O76024 890 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 ZWINTO95229 277 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 APBA3O96018 575 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 CYP1A1P04798 512 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-249ENST00000564606 WEE2P0C1S8 567 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 TROVE2P10155 538 aaKnown RBP eCLIP8.09□□□□□ -1.11
ATXN3-249ENST00000564606 DLATP10515 647 aaKnown RBP8.09□□□□□ -1.11
ATXN3-249ENST00000564606 MYCLP12524 364 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-249ENST00000564606 UNGP13051 313 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-249ENST00000564606 P4HA1P13674 534 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 BRAFP15056 766 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 GNA15P30679 374 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 SSR1P43307 286 aaKnown RBP8.09□□□□□ -1.11
ATXN3-249ENST00000564606 POLGP54098 1239 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-249ENST00000564606 SLC8A3P57103 927 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 RRP1BQ14684 758 aaKnown RBP8.09□□□□□ -1.11
ATXN3-249ENST00000564606 ZACNQ401N2 412 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 PREPLQ4J6C6 727 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-249ENST00000564606 CCDC38Q502W7 563 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 VARS2Q5ST30 1063 aaKnown RBP8.09□□□□□ -1.11
ATXN3-249ENST00000564606 WLSQ5T9L3 541 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 FBXW10Q5XX13 1052 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 DCUN1D2Q6PH85 259 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 ZPBP2Q6X784 338 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 RGS9BPQ6ZS82 235 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 POLNQ7Z5Q5 900 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 APBB1IPQ7Z5R6 666 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-249ENST00000564606 ANKS1BQ7Z6G8 1248 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 ADAT2Q7Z6V5 191 aaKnown RBP8.09□□□□□ -1.11
ATXN3-249ENST00000564606 VSIG10LQ86VR7 867 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 ZBTB8OSQ8IWT0 167 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 ABRAQ8N0Z2 381 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 FEZF2Q8TBJ5 459 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 ACER1Q8TDN7 264 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 FBXO41Q8TF61 875 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 SLC20A1Q8WUM9 679 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 P2RX7Q99572 595 aaKnown RBP8.09□□□□□ -1.11
ATXN3-249ENST00000564606 PRMT1Q99873 361 aaKnown RBP8.09□□□□□ -1.11
ATXN3-249ENST00000564606 ELAC2Q9BQ52 826 aaKnown RBP8.09□□□□□ -1.11
ATXN3-249ENST00000564606 OSBPL8Q9BZF1 889 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 CDC42EP4Q9H3Q1 356 aaKnown RBP8.09□□□□□ -1.11
ATXN3-249ENST00000564606 GOLPH3Q9H4A6 298 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 JPH1Q9HDC5 661 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-249ENST00000564606 PICK1Q9NRD5 415 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 HOXC10Q9NYD6 342 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 TAS2R14Q9NYV8 317 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 NOP53Q9NZM5 478 aaKnown RBP8.09□□□□□ -1.11
ATXN3-249ENST00000564606 SLC9A2Q9UBY0 812 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 AJAP1Q9UKB5 411 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-249ENST00000564606 PNMA3Q9UL41 463 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 SLC12A4Q9UP95 1085 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 PTPN22Q9Y2R2 807 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 STARD13Q9Y3M8 1113 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 STYXL1Q9Y6J8 313 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 IKBKGQ9Y6K9 419 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 USH1CQ9Y6N9 552 aa8.09□□□□□ -1.11
ATXN3-249ENST00000564606 EXOC1LA0A1B0GW35 172 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 TMEM120BA0PK00 339 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 PHF20L1A8MW92 1017 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 BACH1O14867 736 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 TLR3O15455 904 aaKnown RBP8.08□□□□□ -1.12
ATXN3-249ENST00000564606 CLDN3O15551 220 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 PRPF4O43172 522 aaKnown RBP eCLIP8.08□□□□□ -1.12
ATXN3-249ENST00000564606 GJB6O95452 261 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 NR3C2P08235 984 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 CHRNB2P17787 502 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 EIF4BP23588 611 aaKnown RBP8.08□□□□□ -1.12
ATXN3-249ENST00000564606 FLT3P36888 993 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 ITGA8P53708 1063 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 ARL4CP56559 192 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 GSCP56915 257 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-249ENST00000564606 RPS6P62753 249 aaKnown RBP8.08□□□□□ -1.12
ATXN3-249ENST00000564606 UBXN2AP68543 259 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 TRPC3Q13507 836 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 CUL2Q13617 745 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 TRADDQ15628 312 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 SGSM1Q2NKQ1 1148 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 FAM182BQ5T319 152 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 IZUMO3Q5VZ72 239 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 NUGGCQ68CJ6 796 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 PLEKHA7Q6IQ23 1121 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 HIBCHQ6NVY1 386 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-249ENST00000564606 DNAJC24Q6P3W2 148 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 MAEAQ7L5Y9 396 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 SLC47A2Q86VL8 602 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 THNSL1Q8IYQ7 743 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 LRRC34Q8IZ02 419 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 AGGF1Q8N302 714 aaeCLIP8.08□□□□□ -1.12
ATXN3-249ENST00000564606 CHST13Q8NET6 341 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 LRRC8CQ8TDW0 803 aa8.08□□□□□ -1.12
ATXN3-249ENST00000564606 SH3TC2Q8TF17 1288 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms