RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 APTXQ7Z2E3 356 aaKnown RBP13.43□□□□□ -0.26
KARS-204ENST00000564578 SEMA4DQ92854 862 aa13.43□□□□□ -0.26
KARS-204ENST00000564578 B3GALT6Q96L58 329 aa13.43□□□□□ -0.26
KARS-204ENST00000564578 TUBGCP2Q9BSJ2 902 aa13.43□□□□□ -0.26
KARS-204ENST00000564578 COQ4Q9Y3A0 265 aa13.43□□□□□ -0.26
KARS-204ENST00000564578 NUB1Q9Y5A7 615 aa13.43□□□□□ -0.26
KARS-204ENST00000564578 SF3B1O75533 1304 aaKnown RBP eCLIP13.43□□□□□ -0.26
KARS-204ENST00000564578 PRRC2BQ5JSZ5 2229 aaKnown RBP13.43□□□□□ -0.26
KARS-204ENST00000564578 LRRC10BA6NIK2 292 aa13.43□□□□□ -0.26
KARS-204ENST00000564578 KPNA7A9QM74 516 aa13.43□□□□□ -0.26
KARS-204ENST00000564578 M0QZQ0 153 aa13.43□□□□□ -0.26
KARS-204ENST00000564578 PMM2O15305 246 aa13.43□□□□□ -0.26
KARS-204ENST00000564578 EEF1GP26641 437 aaKnown RBP13.43□□□□□ -0.26
KARS-204ENST00000564578 IRS1P35568 1242 aa13.43□□□□□ -0.26
KARS-204ENST00000564578 TAF6P49848 677 aa13.43□□□□□ -0.26
KARS-204ENST00000564578 MXI1P50539 228 aa13.43□□□□□ -0.26
KARS-204ENST00000564578 RBM10P98175 930 aaKnown RBP13.43□□□□□ -0.26
KARS-204ENST00000564578 UBE3AQ05086 875 aa13.43□□□□□ -0.26
KARS-204ENST00000564578 FAM114A1Q8IWE2 563 aa13.43□□□□□ -0.26
KARS-204ENST00000564578 VPS52Q8N1B4 723 aa13.43□□□□□ -0.26
KARS-204ENST00000564578 FAM200AQ8TCP9 573 aa13.43□□□□□ -0.26
KARS-204ENST00000564578 HPDLQ96IR7 371 aa13.43□□□□□ -0.26
KARS-204ENST00000564578 SUSD3Q96L08 255 aa13.43□□□□□ -0.26
KARS-204ENST00000564578 ZMYND15Q9H091 742 aa13.43□□□□□ -0.26
KARS-204ENST00000564578 TSPY26PQ9H489 355 aa13.43□□□□□ -0.26
KARS-204ENST00000564578 SMTNL1A8MU46 457 aa13.42□□□□□ -0.26
KARS-204ENST00000564578 STX10O60499 249 aa13.42□□□□□ -0.26
KARS-204ENST00000564578 PHACTR2O75167 634 aa13.42□□□□□ -0.26
KARS-204ENST00000564578 HLA-DRAP01903 254 aa13.42□□□□□ -0.26
KARS-204ENST00000564578 SOD2P04179 222 aa13.42□□□□□ -0.26
KARS-204ENST00000564578 PNPLA4P41247 253 aa13.42□□□□□ -0.26
KARS-204ENST00000564578 MTIF2P46199 727 aaKnown RBP13.42□□□□□ -0.26
KARS-204ENST00000564578 ADGRE1Q14246 886 aa13.42□□□□□ -0.26
KARS-204ENST00000564578 KRT31Q15323 416 aa13.42□□□□□ -0.26
KARS-204ENST00000564578 RTP2Q5QGT7 225 aa13.42□□□□□ -0.26
KARS-204ENST00000564578 FAM171A1Q5VUB5 890 aa13.42□□□□□ -0.26
KARS-204ENST00000564578 PI4K2AQ9BTU6 479 aa13.42□□□□□ -0.26
KARS-204ENST00000564578 VRTNQ9H8Y1 702 aa13.42□□□□□ -0.26
KARS-204ENST00000564578 PUF60Q9UHX1 559 aaKnown RBP13.42□□□□□ -0.26
KARS-204ENST00000564578 PCDHGC5Q9Y5F6 944 aa13.42□□□□□ -0.26
KARS-204ENST00000564578 TRAPPC3O43617 180 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 LILRB3O75022 631 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 STAU1O95793 577 aaKnown RBP13.41□□□□□ -0.26
KARS-204ENST00000564578 ASS1P00966 412 aaKnown RBP13.41□□□□□ -0.26
KARS-204ENST00000564578 AFPP02771 609 aaKnown RBP13.41□□□□□ -0.26
KARS-204ENST00000564578 FGFR3P22607 806 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 TRPC3Q13507 836 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 MAN2A1Q16706 1144 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 KIAA0319Q5VV43 1072 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 LIMS2Q7Z4I7 341 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 GAS2L3Q86XJ1 694 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 FBXL13Q8NEE6 735 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 LMO3Q8TAP4 145 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 SENP8Q96LD8 212 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 ZBP1Q9H171 429 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 NDST4Q9H3R1 872 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 TLR9Q9NR96 1032 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 RAB20Q9NX57 234 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 GDAP2Q9NXN4 497 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 MAGEC2Q9UBF1 373 aaPredicted RBP13.41□□□□□ -0.26
KARS-204ENST00000564578 LIMA1Q9UHB6 759 aaKnown RBP13.41□□□□□ -0.26
KARS-204ENST00000564578 VWA8A3KMH1 1905 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 BECN2A8MW95 431 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 FSCN2O14926 492 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 CTSAP10619 480 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 TKTP29401 623 aaKnown RBP13.41□□□□□ -0.26
KARS-204ENST00000564578 ATICP31939 592 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 USP41Q3LFD5 358 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 WDR72Q3MJ13 1102 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 SV2CQ496J9 727 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 SPOPLQ6IQ16 392 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 DEFB123Q8N688 67 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 AUTS2Q8WXX7 1259 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 ZNF560Q96MR9 790 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 TCF25Q9BQ70 676 aa13.41□□□□□ -0.26
KARS-204ENST00000564578 APOBEC3GQ9HC16 384 aaKnown RBP13.41□□□□□ -0.26
KARS-204ENST00000564578 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.41□□□□□ -0.26
KARS-204ENST00000564578 TIMM13Q9Y5L4 95 aaPredicted RBP13.41□□□□□ -0.26
KARS-204ENST00000564578 SPTBN5Q9NRC6 3674 aaKnown RBP13.4□□□□□ -0.26
KARS-204ENST00000564578 HIDE1A8MVS5 230 aa13.4□□□□□ -0.26
KARS-204ENST00000564578 P4HA2O15460 535 aa13.4□□□□□ -0.26
KARS-204ENST00000564578 CSPG5O95196 566 aa13.4□□□□□ -0.26
KARS-204ENST00000564578 PAX3P23760 479 aa13.4□□□□□ -0.26
KARS-204ENST00000564578 PIK3CAP42336 1068 aa13.4□□□□□ -0.26
KARS-204ENST00000564578 DSG1Q02413 1049 aa13.4□□□□□ -0.26
KARS-204ENST00000564578 ELAVL2Q12926 359 aaKnown RBP13.4□□□□□ -0.26
KARS-204ENST00000564578 MYO1EQ12965 1108 aa13.4□□□□□ -0.26
KARS-204ENST00000564578 MRPL58Q14197 206 aaKnown RBP13.4□□□□□ -0.26
KARS-204ENST00000564578 SOWAHAQ2M3V2 549 aa13.4□□□□□ -0.26
KARS-204ENST00000564578 SGSM1Q2NKQ1 1148 aa13.4□□□□□ -0.26
KARS-204ENST00000564578 VWA3BQ502W6 1294 aa13.4□□□□□ -0.26
KARS-204ENST00000564578 TMC7Q7Z402 723 aa13.4□□□□□ -0.26
KARS-204ENST00000564578 CEP57Q86XR8 500 aa13.4□□□□□ -0.26
KARS-204ENST00000564578 LNX1Q8TBB1 728 aaPredicted RBP13.4□□□□□ -0.26
KARS-204ENST00000564578 MRPL38Q96DV4 380 aaKnown RBP13.4□□□□□ -0.26
KARS-204ENST00000564578 GUCD1Q96NT3 240 aa13.4□□□□□ -0.26
KARS-204ENST00000564578 TTPALQ9BTX7 342 aa13.4□□□□□ -0.26
KARS-204ENST00000564578 HERC2P3Q9BVR0 1158 aa13.4□□□□□ -0.26
KARS-204ENST00000564578 TAB2Q9NYJ8 693 aa13.4□□□□□ -0.26
KARS-204ENST00000564578 STK39Q9UEW8 545 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms