RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 ARMCX3Q9UH62 379 aaPredicted RBP17.99■□□□□ 0.47
RNF40-206ENST00000564260 CTNND2Q9UQB3 1225 aa17.99■□□□□ 0.47
RNF40-206ENST00000564260 LRRIQ3A6PVS8 624 aaPredicted RBP17.98■□□□□ 0.47
RNF40-206ENST00000564260 HIDE1A8MVS5 230 aa17.98■□□□□ 0.47
RNF40-206ENST00000564260 KPNA7A9QM74 516 aa17.98■□□□□ 0.47
RNF40-206ENST00000564260 PMM2O15305 246 aa17.98■□□□□ 0.47
RNF40-206ENST00000564260 POLR2BP30876 1174 aaKnown RBP17.98■□□□□ 0.47
RNF40-206ENST00000564260 HYAL1Q12794 435 aa17.98■□□□□ 0.47
RNF40-206ENST00000564260 PSMD5Q16401 504 aa17.98■□□□□ 0.47
RNF40-206ENST00000564260 RTP2Q5QGT7 225 aa17.98■□□□□ 0.47
RNF40-206ENST00000564260 ZNF280DQ6N043 979 aa17.98■□□□□ 0.47
RNF40-206ENST00000564260 DSTYKQ6XUX3 929 aa17.98■□□□□ 0.47
RNF40-206ENST00000564260 C15orf39Q6ZRI6 1047 aa17.98■□□□□ 0.47
RNF40-206ENST00000564260 TMEM86AQ8N2M4 240 aa17.98■□□□□ 0.47
RNF40-206ENST00000564260 OR5B17Q8NGF7 314 aa17.98■□□□□ 0.47
RNF40-206ENST00000564260 LNX1Q8TBB1 728 aaPredicted RBP17.98■□□□□ 0.47
RNF40-206ENST00000564260 HASPINQ8TF76 798 aa17.98■□□□□ 0.47
RNF40-206ENST00000564260 RIN2Q8WYP3 895 aaPredicted RBP17.98■□□□□ 0.47
RNF40-206ENST00000564260 CASP10Q92851 521 aa17.98■□□□□ 0.47
RNF40-206ENST00000564260 DUSP9Q99956 384 aaKnown RBP17.98■□□□□ 0.47
RNF40-206ENST00000564260 DZANK1Q9NVP4 752 aa17.98■□□□□ 0.47
RNF40-206ENST00000564260 SIX4Q9UIU6 781 aa17.98■□□□□ 0.47
RNF40-206ENST00000564260 AGAP1Q9UPQ3 857 aa17.98■□□□□ 0.47
RNF40-206ENST00000564260 ANK1P16157 1881 aa17.98■□□□□ 0.47
RNF40-206ENST00000564260 PTPRJQ12913 1337 aa17.98■□□□□ 0.47
RNF40-206ENST00000564260 TRIM49BA6NDI0 452 aa17.97■□□□□ 0.47
RNF40-206ENST00000564260 C4BPAP04003 597 aaKnown RBP17.97■□□□□ 0.47
RNF40-206ENST00000564260 HOXB8P17481 243 aaPredicted RBP17.97■□□□□ 0.47
RNF40-206ENST00000564260 BRCC3P46736 316 aa17.97■□□□□ 0.47
RNF40-206ENST00000564260 YWHAHQ04917 246 aaPredicted RBP17.97■□□□□ 0.47
RNF40-206ENST00000564260 TRPC3Q13507 836 aa17.97■□□□□ 0.47
RNF40-206ENST00000564260 KCNC3Q14003 757 aa17.97■□□□□ 0.47
RNF40-206ENST00000564260 STX1AQ16623 288 aa17.97■□□□□ 0.47
RNF40-206ENST00000564260 SLC8B1Q6J4K2 584 aa17.97■□□□□ 0.47
RNF40-206ENST00000564260 TAS1R1Q7RTX1 841 aa17.97■□□□□ 0.47
RNF40-206ENST00000564260 TOP6BLQ8N6T0 577 aa17.97■□□□□ 0.47
RNF40-206ENST00000564260 RABGGTAQ92696 567 aa17.97■□□□□ 0.47
RNF40-206ENST00000564260 HLA-CQ95604 372 aa17.97■□□□□ 0.47
RNF40-206ENST00000564260 SENP8Q96LD8 212 aa17.97■□□□□ 0.47
RNF40-206ENST00000564260 KLHL5Q96PQ7 755 aa17.97■□□□□ 0.47
RNF40-206ENST00000564260 FAM124BQ9H5Z6 455 aaPredicted RBP17.97■□□□□ 0.47
RNF40-206ENST00000564260 TMEM8AQ9HCN3 771 aa17.97■□□□□ 0.47
RNF40-206ENST00000564260 MYO9BQ13459 2157 aa17.97■□□□□ 0.47
RNF40-206ENST00000564260 TRIP11Q15643 1979 aa17.97■□□□□ 0.47
RNF40-206ENST00000564260 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.96■□□□□ 0.47
RNF40-206ENST00000564260 OR6C75A6NL08 312 aa17.96■□□□□ 0.47
RNF40-206ENST00000564260 TBC1D4O60343 1298 aa17.96■□□□□ 0.47
RNF40-206ENST00000564260 N4BP1O75113 896 aaKnown RBP17.96■□□□□ 0.47
RNF40-206ENST00000564260 KRT19P08727 400 aa17.96■□□□□ 0.47
RNF40-206ENST00000564260 CNPP09543 421 aaKnown RBP17.96■□□□□ 0.47
RNF40-206ENST00000564260 CCDC192P0DO97 292 aa17.96■□□□□ 0.47
RNF40-206ENST00000564260 P4HA1P13674 534 aa17.96■□□□□ 0.47
RNF40-206ENST00000564260 NRIP1P48552 1158 aa17.96■□□□□ 0.47
RNF40-206ENST00000564260 GUCY2FP51841 1108 aa17.96■□□□□ 0.47
RNF40-206ENST00000564260 SMARCB1Q12824 385 aa17.96■□□□□ 0.47
RNF40-206ENST00000564260 ADAM15Q13444 863 aa17.96■□□□□ 0.47
RNF40-206ENST00000564260 AAK1Q2M2I8 961 aa17.96■□□□□ 0.47
RNF40-206ENST00000564260 PUS10Q3MIT2 529 aaKnown RBP17.96■□□□□ 0.47
RNF40-206ENST00000564260 DPCR1Q3MIW9 517 aa17.96■□□□□ 0.47
RNF40-206ENST00000564260 VARS2Q5ST30 1063 aaKnown RBP17.96■□□□□ 0.47
RNF40-206ENST00000564260 KRT39Q6A163 491 aa17.96■□□□□ 0.47
RNF40-206ENST00000564260 CYP26C1Q6V0L0 522 aa17.96■□□□□ 0.47
RNF40-206ENST00000564260 METTL23Q86XA0 190 aa17.96■□□□□ 0.47
RNF40-206ENST00000564260 FAM114A1Q8IWE2 563 aa17.96■□□□□ 0.47
RNF40-206ENST00000564260 MICALL1Q8N3F8 863 aa17.96■□□□□ 0.47
RNF40-206ENST00000564260 PLEKHO2Q8TD55 490 aa17.96■□□□□ 0.47
RNF40-206ENST00000564260 HPDLQ96IR7 371 aa17.96■□□□□ 0.47
RNF40-206ENST00000564260 RHOBTB2Q9BYZ6 727 aa17.96■□□□□ 0.47
RNF40-206ENST00000564260 IMPG2Q9BZV3 1241 aa17.96■□□□□ 0.47
RNF40-206ENST00000564260 PLEKHA4Q9H4M7 779 aa17.96■□□□□ 0.47
RNF40-206ENST00000564260 TMEM63CQ9P1W3 806 aa17.96■□□□□ 0.47
RNF40-206ENST00000564260 PRRC2BQ5JSZ5 2229 aaKnown RBP17.96■□□□□ 0.47
RNF40-206ENST00000564260 P4HA2O15460 535 aa17.95■□□□□ 0.46
RNF40-206ENST00000564260 TEX28O15482 410 aa17.95■□□□□ 0.46
RNF40-206ENST00000564260 HUS1O60921 280 aa17.95■□□□□ 0.46
RNF40-206ENST00000564260 CLASP2O75122 1294 aaKnown RBP17.95■□□□□ 0.46
RNF40-206ENST00000564260 PHACTR2O75167 634 aa17.95■□□□□ 0.46
RNF40-206ENST00000564260 PAPLNO95428 1278 aa17.95■□□□□ 0.46
RNF40-206ENST00000564260 KLRC2P26717 231 aa17.95■□□□□ 0.46
RNF40-206ENST00000564260 TKTP29401 623 aaKnown RBP17.95■□□□□ 0.46
RNF40-206ENST00000564260 BIRC3Q13489 604 aa17.95■□□□□ 0.46
RNF40-206ENST00000564260 NCOA4Q13772 614 aa17.95■□□□□ 0.46
RNF40-206ENST00000564260 RAB33AQ14088 237 aa17.95■□□□□ 0.46
RNF40-206ENST00000564260 SGSM1Q2NKQ1 1148 aa17.95■□□□□ 0.46
RNF40-206ENST00000564260 TDRD10Q5VZ19 366 aaKnown RBP17.95■□□□□ 0.46
RNF40-206ENST00000564260 SMYD5Q6GMV2 418 aa17.95■□□□□ 0.46
RNF40-206ENST00000564260 OVOS1Q6IE37 1185 aa17.95■□□□□ 0.46
RNF40-206ENST00000564260 SV2AQ7L0J3 742 aa17.95■□□□□ 0.46
RNF40-206ENST00000564260 LIMS2Q7Z4I7 341 aa17.95■□□□□ 0.46
RNF40-206ENST00000564260 ADGRD2Q7Z7M1 963 aa17.95■□□□□ 0.46
RNF40-206ENST00000564260 CEP57Q86XR8 500 aa17.95■□□□□ 0.46
RNF40-206ENST00000564260 ZNF516Q92618 1163 aa17.95■□□□□ 0.46
RNF40-206ENST00000564260 POP1Q99575 1024 aaKnown RBP17.95■□□□□ 0.46
RNF40-206ENST00000564260 NAT10Q9H0A0 1025 aaKnown RBP17.95■□□□□ 0.46
RNF40-206ENST00000564260 THAP9Q9H5L6 903 aa17.95■□□□□ 0.46
RNF40-206ENST00000564260 CYB561D2O14569 222 aa17.94■□□□□ 0.46
RNF40-206ENST00000564260 PPEF2O14830 753 aa17.94■□□□□ 0.46
RNF40-206ENST00000564260 SPTLC1O15269 473 aa17.94■□□□□ 0.46
RNF40-206ENST00000564260 SLC34A2O95436 690 aa17.94■□□□□ 0.46
RNF40-206ENST00000564260 CAVIN2O95810 425 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms