RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 KRT19P08727 400 aa18.24■□□□□ 0.51
CMTM3-208ENST00000564247 PIK3CAP42336 1068 aa18.24■□□□□ 0.51
CMTM3-208ENST00000564247 RBP5P82980 135 aa18.24■□□□□ 0.51
CMTM3-208ENST00000564247 NCOA4Q13772 614 aa18.24■□□□□ 0.51
CMTM3-208ENST00000564247 AAK1Q2M2I8 961 aa18.24■□□□□ 0.51
CMTM3-208ENST00000564247 NOMO2Q5JPE7 1267 aa18.24■□□□□ 0.51
CMTM3-208ENST00000564247 TDRD10Q5VZ19 366 aaKnown RBP18.24■□□□□ 0.51
CMTM3-208ENST00000564247 SPECC1LQ69YQ0 1117 aa18.24■□□□□ 0.51
CMTM3-208ENST00000564247 NEK11Q8NG66 645 aa18.24■□□□□ 0.51
CMTM3-208ENST00000564247 SPPL3Q8TCT6 385 aa18.24■□□□□ 0.51
CMTM3-208ENST00000564247 IQCDQ96DY2 449 aa18.24■□□□□ 0.51
CMTM3-208ENST00000564247 IMPG2Q9BZV3 1241 aa18.24■□□□□ 0.51
CMTM3-208ENST00000564247 MIOSQ9NXC5 875 aa18.24■□□□□ 0.51
CMTM3-208ENST00000564247 PTGESO14684 152 aa18.23■□□□□ 0.51
CMTM3-208ENST00000564247 INPPL1O15357 1258 aa18.23■□□□□ 0.51
CMTM3-208ENST00000564247 TPM1P09493 284 aa18.23■□□□□ 0.51
CMTM3-208ENST00000564247 LAG3P18627 525 aa18.23■□□□□ 0.51
CMTM3-208ENST00000564247 SLC9A1P19634 815 aa18.23■□□□□ 0.51
CMTM3-208ENST00000564247 PON1P27169 355 aa18.23■□□□□ 0.51
CMTM3-208ENST00000564247 PBX1P40424 430 aa18.23■□□□□ 0.51
CMTM3-208ENST00000564247 SCNN1GP51170 649 aa18.23■□□□□ 0.51
CMTM3-208ENST00000564247 TFF2Q03403 129 aa18.23■□□□□ 0.51
CMTM3-208ENST00000564247 RNASELQ05823 741 aaKnown RBP18.23■□□□□ 0.51
CMTM3-208ENST00000564247 KCNMA1Q12791 1236 aa18.23■□□□□ 0.51
CMTM3-208ENST00000564247 GRIK3Q13003 919 aa18.23■□□□□ 0.51
CMTM3-208ENST00000564247 CAMK1Q14012 370 aa18.23■□□□□ 0.51
CMTM3-208ENST00000564247 SGSM1Q2NKQ1 1148 aa18.23■□□□□ 0.51
CMTM3-208ENST00000564247 TMC6Q7Z403 805 aa18.23■□□□□ 0.51
CMTM3-208ENST00000564247 PPFIBP1Q86W92 1011 aa18.23■□□□□ 0.51
CMTM3-208ENST00000564247 COLGALT1Q8NBJ5 622 aa18.23■□□□□ 0.51
CMTM3-208ENST00000564247 TAS1R2Q8TE23 839 aa18.23■□□□□ 0.51
CMTM3-208ENST00000564247 FAM193BQ96PV7 902 aaPredicted RBP18.23■□□□□ 0.51
CMTM3-208ENST00000564247 PPP1R10Q96QC0 940 aaKnown RBP18.23■□□□□ 0.51
CMTM3-208ENST00000564247 LSM14BQ9BX40 385 aaKnown RBP18.23■□□□□ 0.51
CMTM3-208ENST00000564247 MRPL9Q9BYD2 267 aaKnown RBP18.23■□□□□ 0.51
CMTM3-208ENST00000564247 INTS2Q9H0H0 1204 aaKnown RBP18.23■□□□□ 0.51
CMTM3-208ENST00000564247 CXCL16Q9H2A7 254 aa18.23■□□□□ 0.51
CMTM3-208ENST00000564247 HCSTQ9UBK5 93 aa18.23■□□□□ 0.51
CMTM3-208ENST00000564247 ITIH6Q6UXX5 1313 aa18.23■□□□□ 0.51
CMTM3-208ENST00000564247 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.22■□□□□ 0.51
CMTM3-208ENST00000564247 CST3P01034 146 aaPredicted RBP18.22■□□□□ 0.51
CMTM3-208ENST00000564247 POMCP01189 267 aa18.22■□□□□ 0.51
CMTM3-208ENST00000564247 ITGB3P05106 788 aa18.22■□□□□ 0.51
CMTM3-208ENST00000564247 ATICP31939 592 aa18.22■□□□□ 0.51
CMTM3-208ENST00000564247 UBE3AQ05086 875 aa18.22■□□□□ 0.51
CMTM3-208ENST00000564247 TCEAL5Q5H9L2 206 aa18.22■□□□□ 0.51
CMTM3-208ENST00000564247 C1orf127Q8N9H9 656 aa18.22■□□□□ 0.51
CMTM3-208ENST00000564247 GSTCDQ8NEC7 633 aa18.22■□□□□ 0.51
CMTM3-208ENST00000564247 TAF4BQ92750 862 aa18.22■□□□□ 0.51
CMTM3-208ENST00000564247 C18orf25Q96B23 403 aaPredicted RBP18.22■□□□□ 0.51
CMTM3-208ENST00000564247 PLCB1Q9NQ66 1216 aa18.22■□□□□ 0.51
CMTM3-208ENST00000564247 AGAP1Q9UPQ3 857 aa18.22■□□□□ 0.51
CMTM3-208ENST00000564247 SIK3Q9Y2K2 1263 aa18.22■□□□□ 0.51
CMTM3-208ENST00000564247 PDCD11Q14690 1871 aaKnown RBP18.22■□□□□ 0.51
CMTM3-208ENST00000564247 ZC3H11AO75152 810 aaKnown RBP eCLIP18.21■□□□□ 0.51
CMTM3-208ENST00000564247 VNN1O95497 513 aa18.21■□□□□ 0.51
CMTM3-208ENST00000564247 TRIM21P19474 475 aaKnown RBP18.21■□□□□ 0.51
CMTM3-208ENST00000564247 DNAJB1P25685 340 aa18.21■□□□□ 0.51
CMTM3-208ENST00000564247 POLR2BP30876 1174 aaKnown RBP18.21■□□□□ 0.51
CMTM3-208ENST00000564247 RPL9P32969 192 aaKnown RBP18.21■□□□□ 0.51
CMTM3-208ENST00000564247 LRMPQ12912 555 aa18.21■□□□□ 0.51
CMTM3-208ENST00000564247 MYO1EQ12965 1108 aa18.21■□□□□ 0.51
CMTM3-208ENST00000564247 TRIM14Q14142 442 aa18.21■□□□□ 0.51
CMTM3-208ENST00000564247 COL19A1Q14993 1142 aa18.21■□□□□ 0.51
CMTM3-208ENST00000564247 PTPN21Q16825 1174 aa18.21■□□□□ 0.51
CMTM3-208ENST00000564247 POF1BQ8WVV4 589 aa18.21■□□□□ 0.51
CMTM3-208ENST00000564247 DDX27Q96GQ7 796 aaKnown RBP18.21■□□□□ 0.51
CMTM3-208ENST00000564247 FAM84AQ96KN4 292 aa18.21■□□□□ 0.51
CMTM3-208ENST00000564247 FAM81BQ96LP2 452 aa18.21■□□□□ 0.51
CMTM3-208ENST00000564247 UROC1Q96N76 676 aa18.21■□□□□ 0.51
CMTM3-208ENST00000564247 NT5C1BQ96P26 610 aa18.21■□□□□ 0.51
CMTM3-208ENST00000564247 FAM207AQ9NSI2 230 aaPredicted RBP18.21■□□□□ 0.51
CMTM3-208ENST00000564247 TUBGCP4Q9UGJ1 667 aa18.21■□□□□ 0.51
CMTM3-208ENST00000564247 DAAM1Q9Y4D1 1078 aa18.21■□□□□ 0.51
CMTM3-208ENST00000564247 TDRD15B5MCY1 1934 aaKnown RBP18.21■□□□□ 0.51
CMTM3-208ENST00000564247 MUC3AQ02505 3323 aa18.21■□□□□ 0.51
CMTM3-208ENST00000564247 TTC28Q96AY4 2481 aa18.2■□□□□ 0.5
CMTM3-208ENST00000564247 NCK2O43639 380 aa18.2■□□□□ 0.5
CMTM3-208ENST00000564247 FGF18O76093 207 aa18.2■□□□□ 0.5
CMTM3-208ENST00000564247 LRPAP1P30533 357 aa18.2■□□□□ 0.5
CMTM3-208ENST00000564247 KLK7P49862 253 aa18.2■□□□□ 0.5
CMTM3-208ENST00000564247 AFF1P51825 1210 aaKnown RBP18.2■□□□□ 0.5
CMTM3-208ENST00000564247 GUCY2FP51841 1108 aa18.2■□□□□ 0.5
CMTM3-208ENST00000564247 MYL6P60660 151 aa18.2■□□□□ 0.5
CMTM3-208ENST00000564247 PLCB3Q01970 1234 aa18.2■□□□□ 0.5
CMTM3-208ENST00000564247 TUSC3Q13454 348 aa18.2■□□□□ 0.5
CMTM3-208ENST00000564247 C9orf57Q5W0N0 161 aa18.2■□□□□ 0.5
CMTM3-208ENST00000564247 TRIM65Q6PJ69 517 aa18.2■□□□□ 0.5
CMTM3-208ENST00000564247 KCNT2Q6UVM3 1135 aa18.2■□□□□ 0.5
CMTM3-208ENST00000564247 CACNA2D4Q7Z3S7 1137 aa18.2■□□□□ 0.5
CMTM3-208ENST00000564247 SPC24Q8NBT2 197 aa18.2■□□□□ 0.5
CMTM3-208ENST00000564247 ZNF397Q8NF99 534 aaPredicted RBP18.2■□□□□ 0.5
CMTM3-208ENST00000564247 LMO3Q8TAP4 145 aa18.2■□□□□ 0.5
CMTM3-208ENST00000564247 SEMA4DQ92854 862 aa18.2■□□□□ 0.5
CMTM3-208ENST00000564247 HPDLQ96IR7 371 aa18.2■□□□□ 0.5
CMTM3-208ENST00000564247 ZNF558Q96NG5 402 aa18.2■□□□□ 0.5
CMTM3-208ENST00000564247 EDEM3Q9BZQ6 932 aa18.2■□□□□ 0.5
CMTM3-208ENST00000564247 UBE2ZQ9H832 354 aaPredicted RBP18.2■□□□□ 0.5
CMTM3-208ENST00000564247 IMPACTQ9P2X3 320 aa18.2■□□□□ 0.5
CMTM3-208ENST00000564247 TCF20Q9UGU0 1960 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms