RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 ZNF396Q96N95 335 aaPredicted RBP19.18■□□□□ 0.66
NME3-205ENST00000563854 PGLYRP2Q96PD5 576 aa19.18■□□□□ 0.66
NME3-205ENST00000563854 ST6GALNAC4Q9H4F1 302 aa19.18■□□□□ 0.66
NME3-205ENST00000563854 TFIP11Q9UBB9 837 aaKnown RBP19.18■□□□□ 0.66
NME3-205ENST00000563854 SEL1LQ9UBV2 794 aa19.18■□□□□ 0.66
NME3-205ENST00000563854 WNT16Q9UBV4 365 aa19.18■□□□□ 0.66
NME3-205ENST00000563854 MYH15Q9Y2K3 1946 aa19.17■□□□□ 0.66
NME3-205ENST00000563854 ARHGEF37A1IGU5 675 aa19.17■□□□□ 0.66
NME3-205ENST00000563854 M0QZQ0 153 aa19.17■□□□□ 0.66
NME3-205ENST00000563854 CEBPBP17676 345 aa19.17■□□□□ 0.66
NME3-205ENST00000563854 PTPN2P17706 415 aa19.17■□□□□ 0.66
NME3-205ENST00000563854 AOC1P19801 751 aa19.17■□□□□ 0.66
NME3-205ENST00000563854 NASPP49321 788 aaPredicted RBP19.17■□□□□ 0.66
NME3-205ENST00000563854 KCNA1Q09470 495 aa19.17■□□□□ 0.66
NME3-205ENST00000563854 TWF1Q12792 350 aa19.17■□□□□ 0.66
NME3-205ENST00000563854 TCEAL8Q8IYN2 117 aa19.17■□□□□ 0.66
NME3-205ENST00000563854 ACCSQ96QU6 501 aa19.17■□□□□ 0.66
NME3-205ENST00000563854 TBC1D17Q9HA65 648 aa19.17■□□□□ 0.66
NME3-205ENST00000563854 ARHGEF3Q9NR81 526 aa19.17■□□□□ 0.66
NME3-205ENST00000563854 AFF4Q9UHB7 1163 aaKnown RBP19.17■□□□□ 0.66
NME3-205ENST00000563854 KCNH3Q9ULD8 1083 aa19.17■□□□□ 0.66
NME3-205ENST00000563854 EXOC7Q9UPT5 735 aa19.17■□□□□ 0.66
NME3-205ENST00000563854 SPTLC2O15270 562 aa19.16■□□□□ 0.66
NME3-205ENST00000563854 ODC1P11926 461 aa19.16■□□□□ 0.66
NME3-205ENST00000563854 NUBP1P53384 320 aa19.16■□□□□ 0.66
NME3-205ENST00000563854 GPC5P78333 572 aa19.16■□□□□ 0.66
NME3-205ENST00000563854 L1TD1Q5T7N2 865 aaKnown RBP19.16■□□□□ 0.66
NME3-205ENST00000563854 C9orf57Q5W0N0 161 aa19.16■□□□□ 0.66
NME3-205ENST00000563854 OVOS1Q6IE37 1185 aa19.16■□□□□ 0.66
NME3-205ENST00000563854 PDZD4Q76G19 769 aaPredicted RBP19.16■□□□□ 0.66
NME3-205ENST00000563854 SYCP3Q8IZU3 236 aa19.16■□□□□ 0.66
NME3-205ENST00000563854 SPRYD3Q8NCJ5 442 aa19.16■□□□□ 0.66
NME3-205ENST00000563854 LINC00301Q8NCQ3 95 aa19.16■□□□□ 0.66
NME3-205ENST00000563854 SNX21Q969T3 373 aa19.16■□□□□ 0.66
NME3-205ENST00000563854 TSPAN18Q96SJ8 248 aa19.16■□□□□ 0.66
NME3-205ENST00000563854 FAM213AQ9BRX8 229 aa19.16■□□□□ 0.66
NME3-205ENST00000563854 IRF2BPLQ9H1B7 796 aa19.16■□□□□ 0.66
NME3-205ENST00000563854 PANK4Q9NVE7 773 aa19.16■□□□□ 0.66
NME3-205ENST00000563854 PPP1R37O75864 691 aa19.15■□□□□ 0.66
NME3-205ENST00000563854 ADRB2P07550 413 aa19.15■□□□□ 0.66
NME3-205ENST00000563854 AARSP49588 968 aaKnown RBP eCLIP19.15■□□□□ 0.66
NME3-205ENST00000563854 CASP5P51878 434 aa19.15■□□□□ 0.66
NME3-205ENST00000563854 IQCEQ6IPM2 695 aa19.15■□□□□ 0.66
NME3-205ENST00000563854 TCEAL4Q96EI5 215 aa19.15■□□□□ 0.66
NME3-205ENST00000563854 SAAL1Q96ER3 474 aa19.15■□□□□ 0.66
NME3-205ENST00000563854 SENP8Q96LD8 212 aa19.15■□□□□ 0.66
NME3-205ENST00000563854 RTP3Q9BQQ7 232 aa19.15■□□□□ 0.66
NME3-205ENST00000563854 FGFBP2Q9BYJ0 223 aa19.15■□□□□ 0.66
NME3-205ENST00000563854 ASB7Q9H672 318 aa19.15■□□□□ 0.66
NME3-205ENST00000563854 DERAQ9Y315 318 aa19.15■□□□□ 0.66
NME3-205ENST00000563854 YIPF1Q9Y548 306 aa19.15■□□□□ 0.66
NME3-205ENST00000563854 STYXL1Q9Y6J8 313 aa19.15■□□□□ 0.66
NME3-205ENST00000563854 MORC2Q9Y6X9 1032 aaPredicted RBP19.15■□□□□ 0.66
NME3-205ENST00000563854 NOTCH4Q99466 2003 aa19.14■□□□□ 0.65
NME3-205ENST00000563854 OR6C75A6NL08 312 aa19.14■□□□□ 0.65
NME3-205ENST00000563854 SPTLC1O15269 473 aa19.14■□□□□ 0.65
NME3-205ENST00000563854 OAZ2O95190 189 aa19.14■□□□□ 0.65
NME3-205ENST00000563854 MYL4P12829 197 aa19.14■□□□□ 0.65
NME3-205ENST00000563854 ADSSP30520 456 aa19.14■□□□□ 0.65
NME3-205ENST00000563854 CDR1P51861 262 aa19.14■□□□□ 0.65
NME3-205ENST00000563854 LILRA4P59901 499 aa19.14■□□□□ 0.65
NME3-205ENST00000563854 POSTNQ15063 836 aa19.14■□□□□ 0.65
NME3-205ENST00000563854 CCDC65Q8IXS2 484 aa19.14■□□□□ 0.65
NME3-205ENST00000563854 HS6ST3Q8IZP7 471 aa19.14■□□□□ 0.65
NME3-205ENST00000563854 DHX58Q96C10 678 aa19.14■□□□□ 0.65
NME3-205ENST00000563854 ZNF512Q96ME7 567 aaPredicted RBP19.14■□□□□ 0.65
NME3-205ENST00000563854 SLC2A4RGQ9NR83 387 aa19.14■□□□□ 0.65
NME3-205ENST00000563854 DPP3Q9NY33 737 aa19.14■□□□□ 0.65
NME3-205ENST00000563854 PCDHB13Q9Y5F0 798 aa19.14■□□□□ 0.65
NME3-205ENST00000563854 ANK1P16157 1881 aa19.14■□□□□ 0.65
NME3-205ENST00000563854 ZNF197O14709 1029 aa19.13■□□□□ 0.65
NME3-205ENST00000563854 TYMPP19971 482 aa19.13■□□□□ 0.65
NME3-205ENST00000563854 CYP4A22Q5TCH4 519 aa19.13■□□□□ 0.65
NME3-205ENST00000563854 ARMCX5Q6P1M9 558 aa19.13■□□□□ 0.65
NME3-205ENST00000563854 CRELD2Q6UXH1 353 aaPredicted RBP19.13■□□□□ 0.65
NME3-205ENST00000563854 EFCAB13Q8IY85 973 aa19.13■□□□□ 0.65
NME3-205ENST00000563854 CCDC105Q8IYK2 499 aa19.13■□□□□ 0.65
NME3-205ENST00000563854 ZSWIM2Q8NEG5 633 aa19.13■□□□□ 0.65
NME3-205ENST00000563854 TMEM209Q96SK2 561 aa19.13■□□□□ 0.65
NME3-205ENST00000563854 PYM1Q9BRP8 204 aaKnown RBP19.13■□□□□ 0.65
NME3-205ENST00000563854 STRA6Q9BX79 667 aa19.13■□□□□ 0.65
NME3-205ENST00000563854 OXCT2Q9BYC2 517 aaPredicted RBP19.13■□□□□ 0.65
NME3-205ENST00000563854 ASAH2Q9NR71 780 aa19.13■□□□□ 0.65
NME3-205ENST00000563854 OLFML3Q9NRN5 406 aa19.13■□□□□ 0.65
NME3-205ENST00000563854 CEP72Q9P209 647 aa19.13■□□□□ 0.65
NME3-205ENST00000563854 C2CD2Q9Y426 696 aa19.13■□□□□ 0.65
NME3-205ENST00000563854 TSC2P49815 1807 aa19.12■□□□□ 0.65
NME3-205ENST00000563854 GOLGA8IPA6NC78 632 aa19.12■□□□□ 0.65
NME3-205ENST00000563854 GOLGA8JA6NMD2 632 aa19.12■□□□□ 0.65
NME3-205ENST00000563854 PIRO00625 290 aa19.12■□□□□ 0.65
NME3-205ENST00000563854 PPP6R2O75170 966 aa19.12■□□□□ 0.65
NME3-205ENST00000563854 PRPF6O94906 941 aaKnown RBP19.12■□□□□ 0.65
NME3-205ENST00000563854 IL18RAPO95256 599 aa19.12■□□□□ 0.65
NME3-205ENST00000563854 YEATS4O95619 227 aa19.12■□□□□ 0.65
NME3-205ENST00000563854 DCNP07585 359 aaKnown RBP19.12■□□□□ 0.65
NME3-205ENST00000563854 GJA1P17302 382 aa19.12■□□□□ 0.65
NME3-205ENST00000563854 CCR2P41597 374 aa19.12■□□□□ 0.65
NME3-205ENST00000563854 TAF6P49848 677 aa19.12■□□□□ 0.65
NME3-205ENST00000563854 TFAMQ00059 246 aaKnown RBP19.12■□□□□ 0.65
NME3-205ENST00000563854 DUSP4Q13115 394 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms