RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 USTQ9Y2C2 406 aa14.49□□□□□ -0.09
CLK3-213ENST00000563842 R3HCC1Q9Y3T6 440 aaKnown RBP14.49□□□□□ -0.09
CLK3-213ENST00000563842 ANO9A1A5B4 782 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 PI4K2BG5E9Z4 385 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 PIRO00625 290 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 PAPLNO95428 1278 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 RPN1P04843 607 aaKnown RBP14.48□□□□□ -0.09
CLK3-213ENST00000563842 ODC1P11926 461 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 TYMPP19971 482 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 ELF1P32519 619 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 PNPLA4P41247 253 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 TAF6P49848 677 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 GUCY2FP51841 1108 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 LILRA4P59901 499 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 TFAMQ00059 246 aaKnown RBP14.48□□□□□ -0.09
CLK3-213ENST00000563842 YWHAHQ04917 246 aaPredicted RBP14.48□□□□□ -0.09
CLK3-213ENST00000563842 PPM1LQ5SGD2 360 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 TPGS2Q68CL5 300 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 NELFCDQ8IXH7 590 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 XXYLT1Q8NBI6 393 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 ZNF461Q8TAF7 563 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 SMG7Q92540 1137 aaKnown RBP14.48□□□□□ -0.09
CLK3-213ENST00000563842 ACSF2Q96CM8 615 aaPredicted RBP14.48□□□□□ -0.09
CLK3-213ENST00000563842 ANKRD36BP1Q96IX9 119 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 ZNF560Q96MR9 790 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 C1QTNF1Q9BXJ1 281 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 PRKD2Q9BZL6 878 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 AGPAT3Q9NRZ7 376 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 DSEQ9UL01 958 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 MAFFQ9ULX9 164 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 HCN4Q9Y3Q4 1203 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 DOCK8Q8NF50 2099 aa14.48□□□□□ -0.09
CLK3-213ENST00000563842 CACNA1AO00555 2505 aa14.47□□□□□ -0.09
CLK3-213ENST00000563842 TGFB1I1O43294 461 aa14.47□□□□□ -0.09
CLK3-213ENST00000563842 DCXO43602 365 aa14.47□□□□□ -0.09
CLK3-213ENST00000563842 TBC1D4O60343 1298 aa14.47□□□□□ -0.09
CLK3-213ENST00000563842 XYLBO75191 536 aa14.47□□□□□ -0.09
CLK3-213ENST00000563842 RFPL2O75678 378 aa14.47□□□□□ -0.09
CLK3-213ENST00000563842 OAZ2O95190 189 aa14.47□□□□□ -0.09
CLK3-213ENST00000563842 C8AP07357 584 aa14.47□□□□□ -0.09
CLK3-213ENST00000563842 WEE2P0C1S8 567 aa14.47□□□□□ -0.09
CLK3-213ENST00000563842 TMEM191BP0C7N4 346 aa14.47□□□□□ -0.09
CLK3-213ENST00000563842 HOXD13P35453 343 aa14.47□□□□□ -0.09
CLK3-213ENST00000563842 SV2CQ496J9 727 aa14.47□□□□□ -0.09
CLK3-213ENST00000563842 OTOP3Q7RTS5 596 aa14.47□□□□□ -0.09
CLK3-213ENST00000563842 RNF135Q8IUD6 432 aa14.47□□□□□ -0.09
CLK3-213ENST00000563842 C12orf56Q8IXR9 622 aa14.47□□□□□ -0.09
CLK3-213ENST00000563842 EFCAB13Q8IY85 973 aa14.47□□□□□ -0.09
CLK3-213ENST00000563842 TDRD5Q8NAT2 981 aaKnown RBP14.47□□□□□ -0.09
CLK3-213ENST00000563842 SENP8Q96LD8 212 aa14.47□□□□□ -0.09
CLK3-213ENST00000563842 GOLPH3LQ9H4A5 285 aa14.47□□□□□ -0.09
CLK3-213ENST00000563842 TSHZ2Q9NRE2 1034 aa14.47□□□□□ -0.09
CLK3-213ENST00000563842 HOOK1Q9UJC3 728 aaKnown RBP14.47□□□□□ -0.09
CLK3-213ENST00000563842 FBXL5Q9UKA1 691 aa14.47□□□□□ -0.09
CLK3-213ENST00000563842 ITGA11Q9UKX5 1188 aa14.47□□□□□ -0.09
CLK3-213ENST00000563842 OR6C75A6NL08 312 aa14.46□□□□□ -0.09
CLK3-213ENST00000563842 CLIC2O15247 247 aa14.46□□□□□ -0.09
CLK3-213ENST00000563842 ADAM12O43184 909 aa14.46□□□□□ -0.09
CLK3-213ENST00000563842 PRPF40AO75400 957 aaKnown RBP14.46□□□□□ -0.09
CLK3-213ENST00000563842 ABLIM3O94929 683 aa14.46□□□□□ -0.09
CLK3-213ENST00000563842 RHOBTB3O94955 611 aa14.46□□□□□ -0.09
CLK3-213ENST00000563842 TNNC2P02585 160 aa14.46□□□□□ -0.09
CLK3-213ENST00000563842 POU2F2P09086 479 aa14.46□□□□□ -0.09
CLK3-213ENST00000563842 ATF2P15336 505 aa14.46□□□□□ -0.09
CLK3-213ENST00000563842 ARPP19P56211 112 aa14.46□□□□□ -0.09
CLK3-213ENST00000563842 ROR1Q01973 937 aa14.46□□□□□ -0.09
CLK3-213ENST00000563842 DPYDQ12882 1025 aa14.46□□□□□ -0.09
CLK3-213ENST00000563842 STK4Q13043 487 aa14.46□□□□□ -0.09
CLK3-213ENST00000563842 KCNB1Q14721 858 aa14.46□□□□□ -0.09
CLK3-213ENST00000563842 SNRNP35Q16560 246 aaKnown RBP14.46□□□□□ -0.09
CLK3-213ENST00000563842 DUOXA2Q1HG44 320 aa14.46□□□□□ -0.09
CLK3-213ENST00000563842 OVOS1Q6IE37 1185 aa14.46□□□□□ -0.09
CLK3-213ENST00000563842 RSPO2Q6UXX9 243 aaPredicted RBP14.46□□□□□ -0.09
CLK3-213ENST00000563842 METTL23Q86XA0 190 aa14.46□□□□□ -0.09
CLK3-213ENST00000563842 KIAA0895Q8NCT3 520 aa14.46□□□□□ -0.09
CLK3-213ENST00000563842 ZSWIM2Q8NEG5 633 aa14.46□□□□□ -0.09
CLK3-213ENST00000563842 FNBP1Q96RU3 617 aa14.46□□□□□ -0.09
CLK3-213ENST00000563842 PDE11AQ9HCR9 933 aa14.46□□□□□ -0.09
CLK3-213ENST00000563842 WDR6Q9NNW5 1121 aaKnown RBP14.46□□□□□ -0.09
CLK3-213ENST00000563842 CHMP5Q9NZZ3 219 aa14.46□□□□□ -0.09
CLK3-213ENST00000563842 TSC2P49815 1807 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 KPNA7A9QM74 516 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 PDXKO00764 312 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 PPEF2O14830 753 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 CALUO43852 315 aaPredicted RBP14.45□□□□□ -0.1
CLK3-213ENST00000563842 EXOC3O60645 756 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 CYP11A1P05108 521 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 CPB1P15086 417 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 CYP2J2P51589 502 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 RBP5P82980 135 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 FAM160A1Q05DH4 1040 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 MYBPC2Q14324 1141 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 CBWD2Q8IUF1 395 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 WDR49Q8IV35 697 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 ZDHHC14Q8IZN3 488 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 FMR1NBQ8N0W7 255 aaPredicted RBP14.45□□□□□ -0.1
CLK3-213ENST00000563842 THEM5Q8N1Q8 247 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 CSGALNACT2Q8N6G5 542 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 LRRC52Q8N7C0 313 aa14.45□□□□□ -0.1
CLK3-213ENST00000563842 RDH13Q8NBN7 331 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms