RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 SOX5P35711 763 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 PBX2P40425 430 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 STAT1P42224 750 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 AFF1P51825 1210 aaKnown RBP20.75■□□□□ 0.91
SPSB3-204ENST00000563741 WDR5P61964 334 aaKnown RBP20.75■□□□□ 0.91
SPSB3-204ENST00000563741 MTF1Q14872 753 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 RAD9BQ6WBX8 426 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 BEST2Q8NFU1 509 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 SHC3Q92529 594 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 APBB2Q92870 758 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 TIFAQ96CG3 184 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 PPP1R10Q96QC0 940 aaKnown RBP20.75■□□□□ 0.91
SPSB3-204ENST00000563741 ARL5CA6NH57 179 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 FOXN3O00409 490 aaPredicted RBP20.75■□□□□ 0.91
SPSB3-204ENST00000563741 CLSTN1O94985 981 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 PLEKP08567 350 aaPredicted RBP20.75■□□□□ 0.91
SPSB3-204ENST00000563741 IBSPP21815 317 aaPredicted RBP20.75■□□□□ 0.91
SPSB3-204ENST00000563741 ARID5AQ03989 594 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 SOX4Q06945 474 aaPredicted RBP20.75■□□□□ 0.91
SPSB3-204ENST00000563741 CUL2Q13617 745 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 ASIC2Q16515 512 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 ENOSF1Q7L5Y1 443 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 IRF2BP2Q7Z5L9 587 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 TAF4BQ92750 862 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 PGBD4Q96DM1 585 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 FAM81BQ96LP2 452 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 NIF3L1Q9GZT8 377 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 RSAD1Q9HA92 442 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 MTMR10Q9NXD2 777 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 PCDHA11Q9Y5I1 949 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 PTPRSQ13332 1948 aa20.75■□□□□ 0.91
SPSB3-204ENST00000563741 PDCD11Q14690 1871 aaKnown RBP20.74■□□□□ 0.91
SPSB3-204ENST00000563741 LAMA2P24043 3122 aaKnown RBP20.74■□□□□ 0.91
SPSB3-204ENST00000563741 GFPT2O94808 682 aa20.74■□□□□ 0.91
SPSB3-204ENST00000563741 RABGGTBP53611 331 aa20.74■□□□□ 0.91
SPSB3-204ENST00000563741 FAM189BP81408 668 aa20.74■□□□□ 0.91
SPSB3-204ENST00000563741 RBP5P82980 135 aa20.74■□□□□ 0.91
SPSB3-204ENST00000563741 HERC6Q8IVU3 1022 aa20.74■□□□□ 0.91
SPSB3-204ENST00000563741 KIAA1524Q8TCG1 905 aa20.74■□□□□ 0.91
SPSB3-204ENST00000563741 RPS6KC1Q96S38 1066 aa20.74■□□□□ 0.91
SPSB3-204ENST00000563741 VRTNQ9H8Y1 702 aa20.74■□□□□ 0.91
SPSB3-204ENST00000563741 AGAP1Q9UPQ3 857 aa20.74■□□□□ 0.91
SPSB3-204ENST00000563741 PPEF2O14830 753 aa20.73■□□□□ 0.91
SPSB3-204ENST00000563741 XPOTO43592 962 aaKnown RBP20.73■□□□□ 0.91
SPSB3-204ENST00000563741 SERPING1P05155 500 aa20.73■□□□□ 0.91
SPSB3-204ENST00000563741 TBXAS1P24557 533 aaPredicted RBP20.73■□□□□ 0.91
SPSB3-204ENST00000563741 ATICP31939 592 aa20.73■□□□□ 0.91
SPSB3-204ENST00000563741 ASPAP45381 313 aa20.73■□□□□ 0.91
SPSB3-204ENST00000563741 FAM43BQ6ZT52 329 aaPredicted RBP20.73■□□□□ 0.91
SPSB3-204ENST00000563741 GOLGA2P5Q9HBQ8 144 aa20.73■□□□□ 0.91
SPSB3-204ENST00000563741 FERP16591 822 aa20.73■□□□□ 0.91
SPSB3-204ENST00000563741 CYP3A5P20815 502 aa20.73■□□□□ 0.91
SPSB3-204ENST00000563741 PRKCIP41743 596 aa20.73■□□□□ 0.91
SPSB3-204ENST00000563741 SCNN1GP51170 649 aa20.73■□□□□ 0.91
SPSB3-204ENST00000563741 DEFB103AP81534 67 aa20.73■□□□□ 0.91
SPSB3-204ENST00000563741 NAB2Q15742 525 aa20.73■□□□□ 0.91
SPSB3-204ENST00000563741 TDRD12Q587J7 1177 aaKnown RBP20.73■□□□□ 0.91
SPSB3-204ENST00000563741 TOGARAM2Q6ZUX3 1019 aa20.73■□□□□ 0.91
SPSB3-204ENST00000563741 FAM71AQ8IYT1 594 aa20.73■□□□□ 0.91
SPSB3-204ENST00000563741 HPDLQ96IR7 371 aa20.73■□□□□ 0.91
SPSB3-204ENST00000563741 FAM161BQ96MY7 647 aa20.73■□□□□ 0.91
SPSB3-204ENST00000563741 TTYH1Q9H313 450 aaPredicted RBP20.73■□□□□ 0.91
SPSB3-204ENST00000563741 NHEJ1Q9H9Q4 299 aaPredicted RBP20.73■□□□□ 0.91
SPSB3-204ENST00000563741 UBN1Q9NPG3 1134 aa20.73■□□□□ 0.91
SPSB3-204ENST00000563741 YBX2Q9Y2T7 364 aaKnown RBP20.73■□□□□ 0.91
SPSB3-204ENST00000563741 ANO9A1A5B4 782 aa20.72■□□□□ 0.91
SPSB3-204ENST00000563741 STAU1O95793 577 aaKnown RBP20.72■□□□□ 0.91
SPSB3-204ENST00000563741 EOMESO95936 686 aa20.72■□□□□ 0.91
SPSB3-204ENST00000563741 AMHP03971 560 aa20.72■□□□□ 0.91
SPSB3-204ENST00000563741 ACO1P21399 889 aaKnown RBP20.72■□□□□ 0.91
SPSB3-204ENST00000563741 KLHL30Q0D2K2 578 aa20.72■□□□□ 0.91
SPSB3-204ENST00000563741 C9orf57Q5W0N0 161 aa20.72■□□□□ 0.91
SPSB3-204ENST00000563741 FMNL3Q8IVF7 1028 aa20.72■□□□□ 0.91
SPSB3-204ENST00000563741 JAKMIP2Q96AA8 810 aa20.72■□□□□ 0.91
SPSB3-204ENST00000563741 NKX2-4Q9H2Z4 354 aa20.72■□□□□ 0.91
SPSB3-204ENST00000563741 SLC38A7Q9NVC3 462 aa20.72■□□□□ 0.91
SPSB3-204ENST00000563741 MIOSQ9NXC5 875 aa20.72■□□□□ 0.91
SPSB3-204ENST00000563741 R3HCC1Q9Y3T6 440 aaKnown RBP20.72■□□□□ 0.91
SPSB3-204ENST00000563741 SSU72P8A0A1W2PR75 194 aa20.71■□□□□ 0.91
SPSB3-204ENST00000563741 ENPP3O14638 875 aa20.71■□□□□ 0.91
SPSB3-204ENST00000563741 INPPL1O15357 1258 aa20.71■□□□□ 0.91
SPSB3-204ENST00000563741 EIF4A3P38919 411 aaKnown RBP20.71■□□□□ 0.91
SPSB3-204ENST00000563741 MAPK8IP2Q13387 824 aaPredicted RBP20.71■□□□□ 0.91
SPSB3-204ENST00000563741 WDR72Q3MJ13 1102 aa20.71■□□□□ 0.91
SPSB3-204ENST00000563741 ZNF667Q5HYK9 610 aa20.71■□□□□ 0.91
SPSB3-204ENST00000563741 SCARA5Q6ZMJ2 495 aa20.71■□□□□ 0.91
SPSB3-204ENST00000563741 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.71■□□□□ 0.91
SPSB3-204ENST00000563741 C17orf53Q8N3J3 647 aaPredicted RBP20.71■□□□□ 0.91
SPSB3-204ENST00000563741 LRRC52Q8N7C0 313 aa20.71■□□□□ 0.91
SPSB3-204ENST00000563741 ZNF576Q9H609 170 aa20.71■□□□□ 0.91
SPSB3-204ENST00000563741 HAUS4Q9H6D7 363 aa20.71■□□□□ 0.91
SPSB3-204ENST00000563741 POLIQ9UNA4 740 aa20.71■□□□□ 0.91
SPSB3-204ENST00000563741 ESPNB1AK53 854 aa20.7■□□□□ 0.9
SPSB3-204ENST00000563741 THP07101 528 aa20.7■□□□□ 0.9
SPSB3-204ENST00000563741 MYOGP15173 224 aa20.7■□□□□ 0.9
SPSB3-204ENST00000563741 LRPAP1P30533 357 aa20.7■□□□□ 0.9
SPSB3-204ENST00000563741 PTK2Q05397 1052 aa20.7■□□□□ 0.9
SPSB3-204ENST00000563741 CCDC170Q8IYT3 715 aa20.7■□□□□ 0.9
SPSB3-204ENST00000563741 UBR7Q8N806 425 aa20.7■□□□□ 0.9
SPSB3-204ENST00000563741 FAXDC2Q96IV6 333 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms