RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 SPATA20Q8TB22 786 aa21.93■■□□□ 1.1
CMTM3-206ENST00000563672 DMAC2Q9NW81 257 aa21.93■■□□□ 1.1
CMTM3-206ENST00000563672 FBXW11Q9UKB1 542 aa21.93■■□□□ 1.1
CMTM3-206ENST00000563672 C5orf42Q9H799 3197 aa21.93■■□□□ 1.1
CMTM3-206ENST00000563672 OAZ2O95190 189 aa21.92■■□□□ 1.1
CMTM3-206ENST00000563672 KIF20AO95235 890 aa21.92■■□□□ 1.1
CMTM3-206ENST00000563672 ATAT1Q5SQI0 421 aa21.92■■□□□ 1.1
CMTM3-206ENST00000563672 DSTYKQ6XUX3 929 aa21.92■■□□□ 1.1
CMTM3-206ENST00000563672 C15orf39Q6ZRI6 1047 aa21.92■■□□□ 1.1
CMTM3-206ENST00000563672 SLC9A9Q8IVB4 645 aa21.92■■□□□ 1.1
CMTM3-206ENST00000563672 BORCS6Q96GS4 357 aa21.92■■□□□ 1.1
CMTM3-206ENST00000563672 SENP8Q96LD8 212 aa21.92■■□□□ 1.1
CMTM3-206ENST00000563672 RIPOR3Q96MK2 946 aa21.92■■□□□ 1.1
CMTM3-206ENST00000563672 NECTIN4Q96NY8 510 aa21.92■■□□□ 1.1
CMTM3-206ENST00000563672 POP1Q99575 1024 aaKnown RBP21.92■■□□□ 1.1
CMTM3-206ENST00000563672 RHOBTB2Q9BYZ6 727 aa21.92■■□□□ 1.1
CMTM3-206ENST00000563672 INTS13Q9NVM9 706 aa21.92■■□□□ 1.1
CMTM3-206ENST00000563672 FBXL5Q9UKA1 691 aa21.92■■□□□ 1.1
CMTM3-206ENST00000563672 PTPRJQ12913 1337 aa21.91■■□□□ 1.1
CMTM3-206ENST00000563672 SPDYE4A6NLX3 237 aa21.91■■□□□ 1.1
CMTM3-206ENST00000563672 RFPL2O75678 378 aa21.91■■□□□ 1.1
CMTM3-206ENST00000563672 WEE2P0C1S8 567 aa21.91■■□□□ 1.1
CMTM3-206ENST00000563672 TYMPP19971 482 aa21.91■■□□□ 1.1
CMTM3-206ENST00000563672 MTHFRP42898 656 aa21.91■■□□□ 1.1
CMTM3-206ENST00000563672 TAF6P49848 677 aa21.91■■□□□ 1.1
CMTM3-206ENST00000563672 CYP24A1Q07973 514 aa21.91■■□□□ 1.1
CMTM3-206ENST00000563672 PSMD6Q15008 389 aa21.91■■□□□ 1.1
CMTM3-206ENST00000563672 CTXN3Q4LDR2 81 aa21.91■■□□□ 1.1
CMTM3-206ENST00000563672 CYP26C1Q6V0L0 522 aa21.91■■□□□ 1.1
CMTM3-206ENST00000563672 GUF1Q8N442 669 aaKnown RBP21.91■■□□□ 1.1
CMTM3-206ENST00000563672 FAM84AQ96KN4 292 aa21.91■■□□□ 1.1
CMTM3-206ENST00000563672 MFSD14AQ96MC6 490 aa21.91■■□□□ 1.1
CMTM3-206ENST00000563672 GSDMAQ96QA5 445 aa21.91■■□□□ 1.1
CMTM3-206ENST00000563672 ITGA11Q9UKX5 1188 aa21.91■■□□□ 1.1
CMTM3-206ENST00000563672 TRAF3IP3Q9Y228 551 aa21.91■■□□□ 1.1
CMTM3-206ENST00000563672 TIMM13Q9Y5L4 95 aaPredicted RBP21.91■■□□□ 1.1
CMTM3-206ENST00000563672 PLXNA3P51805 1871 aa21.9■■□□□ 1.1
CMTM3-206ENST00000563672 CCDC195A0A1B0GUA6 201 aa21.9■■□□□ 1.1
CMTM3-206ENST00000563672 LOC730098B7Z3J9 87 aa21.9■■□□□ 1.1
CMTM3-206ENST00000563672 TULP1O00294 542 aaPredicted RBP21.9■■□□□ 1.1
CMTM3-206ENST00000563672 EXOC3O60645 756 aa21.9■■□□□ 1.1
CMTM3-206ENST00000563672 ZMYND10O75800 440 aa21.9■■□□□ 1.1
CMTM3-206ENST00000563672 ABLIM3O94929 683 aa21.9■■□□□ 1.1
CMTM3-206ENST00000563672 ITGB3P05106 788 aa21.9■■□□□ 1.1
CMTM3-206ENST00000563672 ROR1Q01973 937 aa21.9■■□□□ 1.1
CMTM3-206ENST00000563672 YWHAHQ04917 246 aaPredicted RBP21.9■■□□□ 1.1
CMTM3-206ENST00000563672 MYBPC2Q14324 1141 aa21.9■■□□□ 1.1
CMTM3-206ENST00000563672 DUOXA2Q1HG44 320 aa21.9■■□□□ 1.1
CMTM3-206ENST00000563672 LMBRD2Q68DH5 695 aaPredicted RBP21.9■■□□□ 1.1
CMTM3-206ENST00000563672 SCARA3Q6AZY7 606 aa21.9■■□□□ 1.1
CMTM3-206ENST00000563672 ZNF280DQ6N043 979 aa21.9■■□□□ 1.1
CMTM3-206ENST00000563672 OR5B17Q8NGF7 314 aa21.9■■□□□ 1.1
CMTM3-206ENST00000563672 ZNF461Q8TAF7 563 aa21.9■■□□□ 1.1
CMTM3-206ENST00000563672 ZNF707Q96C28 371 aaPredicted RBP21.9■■□□□ 1.1
CMTM3-206ENST00000563672 MTMR12Q9C0I1 747 aa21.9■■□□□ 1.1
CMTM3-206ENST00000563672 GZF1Q9H116 711 aaPredicted RBP21.9■■□□□ 1.1
CMTM3-206ENST00000563672 POMKQ9H5K3 350 aa21.9■■□□□ 1.1
CMTM3-206ENST00000563672 RMND1Q9NWS8 449 aa21.9■■□□□ 1.1
CMTM3-206ENST00000563672 ZDHHC7Q9NXF8 308 aa21.9■■□□□ 1.1
CMTM3-206ENST00000563672 HOOK1Q9UJC3 728 aaKnown RBP21.9■■□□□ 1.1
CMTM3-206ENST00000563672 MAPK8IP1Q9UQF2 711 aa21.9■■□□□ 1.1
CMTM3-206ENST00000563672 PCDHA5Q9Y5H7 936 aa21.9■■□□□ 1.1
CMTM3-206ENST00000563672 KINO60870 393 aaKnown RBP21.89■■□□□ 1.09
CMTM3-206ENST00000563672 SMC2O95347 1197 aa21.89■■□□□ 1.09
CMTM3-206ENST00000563672 CYP11A1P05108 521 aa21.89■■□□□ 1.09
CMTM3-206ENST00000563672 TMEM191BP0C7N4 346 aa21.89■■□□□ 1.09
CMTM3-206ENST00000563672 POLR2BP30876 1174 aaKnown RBP21.89■■□□□ 1.09
CMTM3-206ENST00000563672 PNPLA4P41247 253 aa21.89■■□□□ 1.09
CMTM3-206ENST00000563672 WDR49Q8IV35 697 aa21.89■■□□□ 1.09
CMTM3-206ENST00000563672 CSGALNACT2Q8N6G5 542 aa21.89■■□□□ 1.09
CMTM3-206ENST00000563672 LRRC52Q8N7C0 313 aa21.89■■□□□ 1.09
CMTM3-206ENST00000563672 ERCC4Q92889 916 aaPredicted RBP21.89■■□□□ 1.09
CMTM3-206ENST00000563672 ANKRD36BP1Q96IX9 119 aa21.89■■□□□ 1.09
CMTM3-206ENST00000563672 OXCT2Q9BYC2 517 aaPredicted RBP21.89■■□□□ 1.09
CMTM3-206ENST00000563672 SIX4Q9UIU6 781 aa21.89■■□□□ 1.09
CMTM3-206ENST00000563672 AGAP1Q9UPQ3 857 aa21.89■■□□□ 1.09
CMTM3-206ENST00000563672 ARHGEF37A1IGU5 675 aa21.88■■□□□ 1.09
CMTM3-206ENST00000563672 WDR27A2RRH5 827 aa21.88■■□□□ 1.09
CMTM3-206ENST00000563672 KPNA7A9QM74 516 aa21.88■■□□□ 1.09
CMTM3-206ENST00000563672 CALUO43852 315 aaPredicted RBP21.88■■□□□ 1.09
CMTM3-206ENST00000563672 NR3C1P04150 777 aa21.88■■□□□ 1.09
CMTM3-206ENST00000563672 ODC1P11926 461 aa21.88■■□□□ 1.09
CMTM3-206ENST00000563672 SSTR3P32745 418 aaPredicted RBP21.88■■□□□ 1.09
CMTM3-206ENST00000563672 UBE2HP62256 183 aa21.88■■□□□ 1.09
CMTM3-206ENST00000563672 RBP5P82980 135 aa21.88■■□□□ 1.09
CMTM3-206ENST00000563672 NFIL3Q16649 462 aa21.88■■□□□ 1.09
CMTM3-206ENST00000563672 UVSSAQ2YD98 709 aa21.88■■□□□ 1.09
CMTM3-206ENST00000563672 SV2CQ496J9 727 aa21.88■■□□□ 1.09
CMTM3-206ENST00000563672 RTL10Q7L3V2 364 aa21.88■■□□□ 1.09
CMTM3-206ENST00000563672 USP37Q86T82 979 aa21.88■■□□□ 1.09
CMTM3-206ENST00000563672 ZNF560Q96MR9 790 aa21.88■■□□□ 1.09
CMTM3-206ENST00000563672 PRKD2Q9BZL6 878 aa21.88■■□□□ 1.09
CMTM3-206ENST00000563672 CYB561D2O14569 222 aa21.87■■□□□ 1.09
CMTM3-206ENST00000563672 PRPF40AO75400 957 aaKnown RBP21.87■■□□□ 1.09
CMTM3-206ENST00000563672 TNNC2P02585 160 aa21.87■■□□□ 1.09
CMTM3-206ENST00000563672 C8AP07357 584 aa21.87■■□□□ 1.09
CMTM3-206ENST00000563672 HNRNPA1P09651 372 aaKnown RBP eCLIP21.87■■□□□ 1.09
CMTM3-206ENST00000563672 DLATP10515 647 aaKnown RBP21.87■■□□□ 1.09
CMTM3-206ENST00000563672 HOXA9P31269 272 aa21.87■■□□□ 1.09
CMTM3-206ENST00000563672 ARPP19P56211 112 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms