RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 SCYL3Q8IZE3 742 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 TTC8Q8TAM2 541 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 RIT2Q99578 217 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 RAVER2Q9HCJ3 691 aaKnown RBP12.51□□□□□ -0.41
ABCA3-203ENST00000563623 ANKFY1Q9P2R3 1169 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 DNPEPQ9ULA0 475 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 A0A1W2PPM1 405 aa12.5□□□□□ -0.41
ABCA3-203ENST00000563623 POLRMTO00411 1230 aaKnown RBP12.5□□□□□ -0.41
ABCA3-203ENST00000563623 NPTX2P47972 431 aa12.5□□□□□ -0.41
ABCA3-203ENST00000563623 RASSF2P50749 326 aa12.5□□□□□ -0.41
ABCA3-203ENST00000563623 GALNTL6Q49A17 601 aa12.5□□□□□ -0.41
ABCA3-203ENST00000563623 FAM182AQ5T1J6 154 aa12.5□□□□□ -0.41
ABCA3-203ENST00000563623 MIS18BP1Q6P0N0 1132 aa12.5□□□□□ -0.41
ABCA3-203ENST00000563623 APBB1IPQ7Z5R6 666 aaPredicted RBP12.5□□□□□ -0.41
ABCA3-203ENST00000563623 GLIS1Q8NBF1 620 aa12.5□□□□□ -0.41
ABCA3-203ENST00000563623 DTX3LQ8TDB6 740 aa12.5□□□□□ -0.41
ABCA3-203ENST00000563623 SPIRE2Q8WWL2 714 aa12.5□□□□□ -0.41
ABCA3-203ENST00000563623 IKBKGQ9Y6K9 419 aa12.5□□□□□ -0.41
ABCA3-203ENST00000563623 ENTPD5O75356 428 aa12.5□□□□□ -0.41
ABCA3-203ENST00000563623 NPR1P16066 1061 aa12.5□□□□□ -0.41
ABCA3-203ENST00000563623 PECAM1P16284 738 aaPredicted RBP12.5□□□□□ -0.41
ABCA3-203ENST00000563623 MYBPC2Q14324 1141 aa12.5□□□□□ -0.41
ABCA3-203ENST00000563623 VPS72Q15906 364 aa12.5□□□□□ -0.41
ABCA3-203ENST00000563623 TAF1BQ53T94 588 aaPredicted RBP12.5□□□□□ -0.41
ABCA3-203ENST00000563623 CGB2Q6NT52 195 aa12.5□□□□□ -0.41
ABCA3-203ENST00000563623 C12orf50Q8NA57 414 aaPredicted RBP12.5□□□□□ -0.41
ABCA3-203ENST00000563623 GLIS2Q9BZE0 524 aaPredicted RBP12.5□□□□□ -0.41
ABCA3-203ENST00000563623 SUDS3Q9H7L9 328 aaPredicted RBP12.5□□□□□ -0.41
ABCA3-203ENST00000563623 LUC7L3O95232 432 aaKnown RBP12.5□□□□□ -0.41
ABCA3-203ENST00000563623 OAS1P00973 400 aaKnown RBP12.5□□□□□ -0.41
ABCA3-203ENST00000563623 ADRA2BP18089 450 aa12.5□□□□□ -0.41
ABCA3-203ENST00000563623 KRT4P19013 534 aa12.5□□□□□ -0.41
ABCA3-203ENST00000563623 MTDHQ86UE4 582 aaKnown RBP12.5□□□□□ -0.41
ABCA3-203ENST00000563623 PALM2Q8IXS6 379 aa12.5□□□□□ -0.41
ABCA3-203ENST00000563623 KCTD17Q8N5Z5 321 aa12.5□□□□□ -0.41
ABCA3-203ENST00000563623 TBC1D10AQ9BXI6 508 aa12.5□□□□□ -0.41
ABCA3-203ENST00000563623 KIAA1586Q9HCI6 787 aa12.5□□□□□ -0.41
ABCA3-203ENST00000563623 CHKBQ9Y259 395 aa12.5□□□□□ -0.41
ABCA3-203ENST00000563623 MROH7Q68CQ1 1323 aa12.5□□□□□ -0.41
ABCA3-203ENST00000563623 MTA2O94776 668 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 PROSCO94903 275 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 CFHP08603 1231 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 IVDP26440 423 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 GNA15P30679 374 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 SLC1A5Q15758 541 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 TKFCQ3LXA3 575 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 RNF43Q68DV7 783 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 RHBDF2Q6PJF5 856 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 AGGF1Q8N302 714 aaeCLIP12.49□□□□□ -0.41
ABCA3-203ENST00000563623 PYROXD1Q8WU10 500 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 TCHPQ9BT92 498 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 ZMYND8Q9ULU4 1186 aaPredicted RBP12.49□□□□□ -0.41
ABCA3-203ENST00000563623 HLA-DRAP01903 254 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 ADSSP30520 456 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 SLC1A1P43005 524 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 CCNG2Q16589 344 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 SEZ6Q53EL9 994 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 NLRP9Q7RTR0 991 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 CCDC125Q86Z20 511 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 DDX27Q96GQ7 796 aaKnown RBP12.49□□□□□ -0.41
ABCA3-203ENST00000563623 TMEM121Q9BTD3 319 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 ZWILCHQ9H900 591 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 MRPL47Q9HD33 250 aaKnown RBP12.49□□□□□ -0.41
ABCA3-203ENST00000563623 METTL5Q9NRN9 209 aaKnown RBP12.49□□□□□ -0.41
ABCA3-203ENST00000563623 GINM1Q9NU53 330 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 SEPT9Q9UHD8 586 aaPredicted RBP12.49□□□□□ -0.41
ABCA3-203ENST00000563623 PCDHB2Q9Y5E7 798 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 SMIM24O75264 130 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 CENPCQ03188 943 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 NFX1Q12986 1120 aaKnown RBP12.49□□□□□ -0.41
ABCA3-203ENST00000563623 CENPUQ71F23 418 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 FAM13CQ8NE31 585 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 SPDYE1Q8NFV5 336 aaPredicted RBP12.49□□□□□ -0.41
ABCA3-203ENST00000563623 TTC17Q96AE7 1141 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 TRIM11Q96F44 468 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 FAM81BQ96LP2 452 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 IDI2Q9BXS1 227 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.49□□□□□ -0.41
ABCA3-203ENST00000563623 SLC5A4Q9NY91 659 aa12.49□□□□□ -0.41
ABCA3-203ENST00000563623 SAE1Q9UBE0 346 aaPredicted RBP12.49□□□□□ -0.41
ABCA3-203ENST00000563623 BPIFB4P59827 614 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 MFSD7Q6UXD7 560 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 TRABD2AQ86V40 505 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 GPD1LQ8N335 351 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 STMN2Q93045 179 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 TAAR1Q96RJ0 339 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 GABBR1Q9UBS5 961 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 RAD17O75943 681 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 ATP5HO75947 161 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 SSTR1P30872 391 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 GTF2BQ00403 316 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 LMNB2Q03252 620 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 CYP24A1Q07973 514 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 MTERF2Q49AM1 385 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 STRIP1Q5VSL9 837 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 DPH6Q7L8W6 267 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 NLRX1Q86UT6 975 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 ZNF341Q9BYN7 854 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 RNPEPL1Q9HAU8 725 aa12.48□□□□□ -0.41
ABCA3-203ENST00000563623 COL20A1Q9P218 1284 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms