RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 ZBTB5O15062 677 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 CYP26A1O43174 497 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 DPEP1P16444 411 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 CLK2P49760 499 aaKnown RBP13.46□□□□□ -0.25
CCDC187-201ENST00000563590 CGB2Q6NT52 195 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 CERS5Q8N5B7 392 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 ANKLE1Q8NAG6 615 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 PHC3Q8NDX5 983 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 ITFG2Q969R8 447 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 PPP1R16BQ96T49 567 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 DNAJC18Q9H819 358 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 CLIC5Q9NZA1 410 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 B2RBV5 119 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 CCDC22O60826 627 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 KRT4P19013 534 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 PTPN4P29074 926 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 FMO5P49326 533 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 GRAMD1BQ3KR37 738 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 CBWD6Q4V339 395 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 ASPRV1Q53RT3 343 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 CBWD3Q5JTY5 395 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 CBWD5Q5RIA9 395 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 RGS9BPQ6ZS82 235 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 ST13P4Q8IZP2 240 aaPredicted RBP13.46□□□□□ -0.25
CCDC187-201ENST00000563590 AKT1S1Q96B36 256 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 TCHPQ9BT92 498 aa13.46□□□□□ -0.25
CCDC187-201ENST00000563590 LARSQ9P2J5 1176 aaKnown RBP13.46□□□□□ -0.25
CCDC187-201ENST00000563590 ATP2A1O14983 1001 aa13.46□□□□□ -0.26
CCDC187-201ENST00000563590 NPTXRO95502 500 aa13.46□□□□□ -0.26
CCDC187-201ENST00000563590 SETSIPP0DME0 302 aa13.46□□□□□ -0.26
CCDC187-201ENST00000563590 P3H1Q32P28 736 aa13.46□□□□□ -0.26
CCDC187-201ENST00000563590 RASSF3Q86WH2 238 aa13.46□□□□□ -0.26
CCDC187-201ENST00000563590 ART4Q93070 314 aa13.46□□□□□ -0.26
CCDC187-201ENST00000563590 SYT11Q9BT88 431 aa13.46□□□□□ -0.26
CCDC187-201ENST00000563590 TRIM55Q9BYV6 548 aa13.46□□□□□ -0.26
CCDC187-201ENST00000563590 GPR88Q9GZN0 384 aa13.46□□□□□ -0.26
CCDC187-201ENST00000563590 LRMDAQ9H2I8 198 aa13.46□□□□□ -0.26
CCDC187-201ENST00000563590 NDE1Q9NXR1 346 aa13.46□□□□□ -0.26
CCDC187-201ENST00000563590 LRRC42Q9Y546 428 aa13.46□□□□□ -0.26
CCDC187-201ENST00000563590 SLC16A3O15427 465 aaKnown RBP13.45□□□□□ -0.26
CCDC187-201ENST00000563590 TRPA1O75762 1119 aa13.45□□□□□ -0.26
CCDC187-201ENST00000563590 CETPP11597 493 aa13.45□□□□□ -0.26
CCDC187-201ENST00000563590 ACADSP16219 412 aa13.45□□□□□ -0.26
CCDC187-201ENST00000563590 CD58P19256 250 aa13.45□□□□□ -0.26
CCDC187-201ENST00000563590 NEK3P51956 506 aa13.45□□□□□ -0.26
CCDC187-201ENST00000563590 DYNLT1P63172 113 aa13.45□□□□□ -0.26
CCDC187-201ENST00000563590 ZNF543Q08ER8 600 aa13.45□□□□□ -0.26
CCDC187-201ENST00000563590 CLUL1Q15846 466 aa13.45□□□□□ -0.26
CCDC187-201ENST00000563590 RNF43Q68DV7 783 aa13.45□□□□□ -0.26
CCDC187-201ENST00000563590 DRAXINQ8NBI3 349 aaPredicted RBP13.45□□□□□ -0.26
CCDC187-201ENST00000563590 KAT5Q92993 513 aa13.45□□□□□ -0.26
CCDC187-201ENST00000563590 DNAJC1Q96KC8 554 aaKnown RBP13.45□□□□□ -0.26
CCDC187-201ENST00000563590 KIFC3Q9BVG8 833 aa13.45□□□□□ -0.26
CCDC187-201ENST00000563590 AMNQ9BXJ7 453 aa13.45□□□□□ -0.26
CCDC187-201ENST00000563590 CYP4F11Q9HBI6 524 aa13.45□□□□□ -0.26
CCDC187-201ENST00000563590 TGFB1I1O43294 461 aa13.45□□□□□ -0.26
CCDC187-201ENST00000563590 ATP6V1B1P15313 513 aa13.45□□□□□ -0.26
CCDC187-201ENST00000563590 WDR4P57081 412 aaKnown RBP13.45□□□□□ -0.26
CCDC187-201ENST00000563590 SLC34A1Q06495 639 aa13.45□□□□□ -0.26
CCDC187-201ENST00000563590 CRY2Q49AN0 593 aa13.45□□□□□ -0.26
CCDC187-201ENST00000563590 FAM102BQ5T8I3 360 aa13.45□□□□□ -0.26
CCDC187-201ENST00000563590 CTAGE3PQ8IX95 158 aa13.45□□□□□ -0.26
CCDC187-201ENST00000563590 ARHGAP24Q8N264 748 aa13.45□□□□□ -0.26
CCDC187-201ENST00000563590 PREBQ9HCU5 417 aa13.45□□□□□ -0.26
CCDC187-201ENST00000563590 LMCD1Q9NZU5 365 aa13.45□□□□□ -0.26
CCDC187-201ENST00000563590 RGS17Q9UGC6 210 aaPredicted RBP13.45□□□□□ -0.26
CCDC187-201ENST00000563590 PRKAG3Q9UGI9 489 aa13.45□□□□□ -0.26
CCDC187-201ENST00000563590 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.45□□□□□ -0.26
CCDC187-201ENST00000563590 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.45□□□□□ -0.26
CCDC187-201ENST00000563590 K7ENM7 598 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 TJP3O95049 919 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 MAGEA4P43358 317 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 SOX10P56693 466 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 CLPTM1LQ96KA5 538 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 AAASQ9NRG9 546 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 GINS2Q9Y248 185 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 TBX10O75333 385 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 PGM3O95394 542 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 ACSBG2Q5FVE4 666 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 NIM1KQ8IY84 436 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 SLC26A7Q8TE54 656 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 FNBP1Q96RU3 617 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 SYNCQ9H7C4 482 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 ARL8BQ9NVJ2 186 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 ATAD5Q96QE3 1844 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 GTPBP10A4D1E9 387 aaKnown RBP13.44□□□□□ -0.26
CCDC187-201ENST00000563590 SGPL1O95470 568 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 NDUFB10O96000 172 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 SPATA31C1P0DKV0 1188 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 ADRA1DP25100 572 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 DLGAP5Q15398 846 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 WASHC2DQ5SRD0 308 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 CDAN1Q8IWY9 1227 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 BORCS6Q96GS4 357 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 ZNF333Q96JL9 665 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 CFAP57Q96MR6 1250 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 APEX2Q9UBZ4 518 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 ANGPTL2Q9UKU9 493 aa13.44□□□□□ -0.26
CCDC187-201ENST00000563590 EMSYQ7Z589 1322 aa13.43□□□□□ -0.26
CCDC187-201ENST00000563590 A0A1W2PPM1 405 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms