RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 MARCKSP29966 332 aaPredicted RBP22.8■■□□□ 1.24
CHD9-208ENST00000563410 UBA7P41226 1012 aa22.8■■□□□ 1.24
CHD9-208ENST00000563410 YWHAHQ04917 246 aaPredicted RBP22.8■■□□□ 1.24
CHD9-208ENST00000563410 PPP2R3AQ06190 1150 aa22.8■■□□□ 1.24
CHD9-208ENST00000563410 TWF1Q12792 350 aa22.8■■□□□ 1.24
CHD9-208ENST00000563410 LARP1BQ659C4 914 aaKnown RBP22.8■■□□□ 1.24
CHD9-208ENST00000563410 SLC39A4Q6P5W5 647 aa22.8■■□□□ 1.24
CHD9-208ENST00000563410 TPRG1Q6ZUI0 275 aa22.8■■□□□ 1.24
CHD9-208ENST00000563410 MYCT1Q8N699 235 aa22.8■■□□□ 1.24
CHD9-208ENST00000563410 ASB16Q96NS5 453 aa22.8■■□□□ 1.24
CHD9-208ENST00000563410 BCO2Q9BYV7 579 aa22.8■■□□□ 1.24
CHD9-208ENST00000563410 PARVGQ9HBI0 331 aa22.8■■□□□ 1.24
CHD9-208ENST00000563410 HEBP1Q9NRV9 189 aa22.8■■□□□ 1.24
CHD9-208ENST00000563410 TCHHQ07283 1943 aa22.8■■□□□ 1.24
CHD9-208ENST00000563410 PPEF2O14830 753 aa22.79■■□□□ 1.24
CHD9-208ENST00000563410 OGTO15294 1046 aa22.79■■□□□ 1.24
CHD9-208ENST00000563410 TARSP26639 723 aaKnown RBP22.79■■□□□ 1.24
CHD9-208ENST00000563410 MCM2P49736 904 aa22.79■■□□□ 1.24
CHD9-208ENST00000563410 EPHA5P54756 1037 aa22.79■■□□□ 1.24
CHD9-208ENST00000563410 KARSQ15046 597 aaKnown RBP22.79■■□□□ 1.24
CHD9-208ENST00000563410 KYAT1Q16773 422 aa22.79■■□□□ 1.24
CHD9-208ENST00000563410 CYP4A22Q5TCH4 519 aa22.79■■□□□ 1.24
CHD9-208ENST00000563410 ELMOD1Q8N336 334 aa22.79■■□□□ 1.24
CHD9-208ENST00000563410 KCNG4Q8TDN1 519 aa22.79■■□□□ 1.24
CHD9-208ENST00000563410 RAD54LQ92698 747 aa22.79■■□□□ 1.24
CHD9-208ENST00000563410 ZNF512Q96ME7 567 aaPredicted RBP22.79■■□□□ 1.24
CHD9-208ENST00000563410 ZSWIM3Q96MP5 696 aa22.79■■□□□ 1.24
CHD9-208ENST00000563410 ZFP14Q9HCL3 533 aa22.79■■□□□ 1.24
CHD9-208ENST00000563410 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.79■■□□□ 1.24
CHD9-208ENST00000563410 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.79■■□□□ 1.24
CHD9-208ENST00000563410 DNAH14Q0VDD8 3507 aa22.79■■□□□ 1.24
CHD9-208ENST00000563410 A0A0B4J269 797 aa22.78■■□□□ 1.24
CHD9-208ENST00000563410 TRAK2O60296 914 aa22.78■■□□□ 1.24
CHD9-208ENST00000563410 FAM13AO94988 1023 aa22.78■■□□□ 1.24
CHD9-208ENST00000563410 OR4Q2P0C623 313 aa22.78■■□□□ 1.24
CHD9-208ENST00000563410 SCP2P22307 547 aa22.78■■□□□ 1.24
CHD9-208ENST00000563410 LONP1P36776 959 aaKnown RBP22.78■■□□□ 1.24
CHD9-208ENST00000563410 FZD5Q13467 585 aa22.78■■□□□ 1.24
CHD9-208ENST00000563410 GRM2Q14416 872 aa22.78■■□□□ 1.24
CHD9-208ENST00000563410 IQCEQ6IPM2 695 aa22.78■■□□□ 1.24
CHD9-208ENST00000563410 ZC3H14Q6PJT7 736 aaKnown RBP22.78■■□□□ 1.24
CHD9-208ENST00000563410 CLDN23Q96B33 292 aa22.78■■□□□ 1.24
CHD9-208ENST00000563410 CRISPLD1Q9H336 500 aa22.78■■□□□ 1.24
CHD9-208ENST00000563410 RPF1Q9H9Y2 349 aaKnown RBP22.78■■□□□ 1.24
CHD9-208ENST00000563410 YIPF1Q9Y548 306 aa22.78■■□□□ 1.24
CHD9-208ENST00000563410 CEP250Q9BV73 2442 aa22.77■■□□□ 1.24
CHD9-208ENST00000563410 BMP15O95972 392 aa22.77■■□□□ 1.24
CHD9-208ENST00000563410 GJA1P17302 382 aa22.77■■□□□ 1.24
CHD9-208ENST00000563410 NMT1P30419 496 aaKnown RBP22.77■■□□□ 1.24
CHD9-208ENST00000563410 GTF2BQ00403 316 aa22.77■■□□□ 1.24
CHD9-208ENST00000563410 SF3A1Q15459 793 aaKnown RBP22.77■■□□□ 1.24
CHD9-208ENST00000563410 ZNF528Q3MIS6 628 aa22.77■■□□□ 1.24
CHD9-208ENST00000563410 SPATA1Q5VX52 437 aa22.77■■□□□ 1.24
CHD9-208ENST00000563410 BRAPQ7Z569 592 aa22.77■■□□□ 1.24
CHD9-208ENST00000563410 DNASE1L2Q92874 299 aa22.77■■□□□ 1.24
CHD9-208ENST00000563410 TSPAN18Q96SJ8 248 aa22.77■■□□□ 1.24
CHD9-208ENST00000563410 LRRC3Q9BY71 257 aa22.77■■□□□ 1.24
CHD9-208ENST00000563410 OXCT2Q9BYC2 517 aaPredicted RBP22.77■■□□□ 1.24
CHD9-208ENST00000563410 ASAH2Q9NR71 780 aa22.77■■□□□ 1.24
CHD9-208ENST00000563410 SPATA6Q9NWH7 488 aaPredicted RBP22.77■■□□□ 1.24
CHD9-208ENST00000563410 CPSF3Q9UKF6 684 aaKnown RBP22.77■■□□□ 1.24
CHD9-208ENST00000563410 CACNA1AO00555 2505 aa22.77■■□□□ 1.24
CHD9-208ENST00000563410 NCANO14594 1321 aa22.77■■□□□ 1.24
CHD9-208ENST00000563410 LAMTOR5O43504 91 aa22.76■■□□□ 1.23
CHD9-208ENST00000563410 XPOTO43592 962 aaKnown RBP22.76■■□□□ 1.23
CHD9-208ENST00000563410 CENPBP07199 599 aaPredicted RBP22.76■■□□□ 1.23
CHD9-208ENST00000563410 MYL4P12829 197 aa22.76■■□□□ 1.23
CHD9-208ENST00000563410 MAGEA9P43362 315 aa22.76■■□□□ 1.23
CHD9-208ENST00000563410 GPR17Q13304 367 aa22.76■■□□□ 1.23
CHD9-208ENST00000563410 JADE1Q6IE81 842 aa22.76■■□□□ 1.23
CHD9-208ENST00000563410 VITQ6UXI7 678 aa22.76■■□□□ 1.23
CHD9-208ENST00000563410 DSTYKQ6XUX3 929 aa22.76■■□□□ 1.23
CHD9-208ENST00000563410 ZNF852Q6ZMS4 543 aa22.76■■□□□ 1.23
CHD9-208ENST00000563410 MAP4K3Q8IVH8 894 aa22.76■■□□□ 1.23
CHD9-208ENST00000563410 LEMD2Q8NC56 503 aa22.76■■□□□ 1.23
CHD9-208ENST00000563410 SMARCD2Q92925 531 aa22.76■■□□□ 1.23
CHD9-208ENST00000563410 PGLYRP2Q96PD5 576 aa22.76■■□□□ 1.23
CHD9-208ENST00000563410 NELL2Q99435 816 aa22.76■■□□□ 1.23
CHD9-208ENST00000563410 MSTO1Q9BUK6 570 aa22.76■■□□□ 1.23
CHD9-208ENST00000563410 DNAJC25Q9H1X3 360 aa22.76■■□□□ 1.23
CHD9-208ENST00000563410 FBXO4Q9UKT5 387 aa22.76■■□□□ 1.23
CHD9-208ENST00000563410 NUP210Q8TEM1 1887 aaPredicted RBP22.76■■□□□ 1.23
CHD9-208ENST00000563410 OR6C75A6NL08 312 aa22.75■■□□□ 1.23
CHD9-208ENST00000563410 ANKRD63C9JTQ0 380 aa22.75■■□□□ 1.23
CHD9-208ENST00000563410 SPTLC1O15269 473 aa22.75■■□□□ 1.23
CHD9-208ENST00000563410 TYMPP19971 482 aa22.75■■□□□ 1.23
CHD9-208ENST00000563410 LILRA4P59901 499 aa22.75■■□□□ 1.23
CHD9-208ENST00000563410 DUSP4Q13115 394 aa22.75■■□□□ 1.23
CHD9-208ENST00000563410 OVOS1Q6IE37 1185 aa22.75■■□□□ 1.23
CHD9-208ENST00000563410 USP37Q86T82 979 aa22.75■■□□□ 1.23
CHD9-208ENST00000563410 TMC8Q8IU68 726 aa22.75■■□□□ 1.23
CHD9-208ENST00000563410 CD302Q8IX05 232 aa22.75■■□□□ 1.23
CHD9-208ENST00000563410 ZNF687Q8N1G0 1237 aa22.75■■□□□ 1.23
CHD9-208ENST00000563410 SUMF1Q8NBK3 374 aa22.75■■□□□ 1.23
CHD9-208ENST00000563410 SHKBP1Q8TBC3 707 aa22.75■■□□□ 1.23
CHD9-208ENST00000563410 LARP4BQ92615 738 aaKnown RBP22.75■■□□□ 1.23
CHD9-208ENST00000563410 FAM212AQ96EL1 285 aa22.75■■□□□ 1.23
CHD9-208ENST00000563410 TRMT61BQ9BVS5 477 aaKnown RBP22.75■■□□□ 1.23
CHD9-208ENST00000563410 ZHX3Q9H4I2 956 aa22.75■■□□□ 1.23
CHD9-208ENST00000563410 BRD9Q9H8M2 597 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms