RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 TRIOO75962 3097 aa30.61■■■□□ 2.49
NME3-203ENST00000563367 C2CD4DB7Z1M9 353 aa30.61■■■□□ 2.49
NME3-203ENST00000563367 CLIC2O15247 247 aa30.61■■■□□ 2.49
NME3-203ENST00000563367 RPN1P04843 607 aaKnown RBP30.61■■■□□ 2.49
NME3-203ENST00000563367 TFAMQ00059 246 aaKnown RBP30.61■■■□□ 2.49
NME3-203ENST00000563367 ROR1Q01973 937 aa30.61■■■□□ 2.49
NME3-203ENST00000563367 CTXN3Q4LDR2 81 aa30.61■■■□□ 2.49
NME3-203ENST00000563367 PRKD2Q9BZL6 878 aa30.61■■■□□ 2.49
NME3-203ENST00000563367 NR2E1Q9Y466 385 aa30.61■■■□□ 2.49
NME3-203ENST00000563367 DOCK8Q8NF50 2099 aa30.61■■■□□ 2.49
NME3-203ENST00000563367 WDR27A2RRH5 827 aa30.6■■■□□ 2.49
NME3-203ENST00000563367 C8AP07357 584 aa30.6■■■□□ 2.49
NME3-203ENST00000563367 ARPP19P56211 112 aa30.6■■■□□ 2.49
NME3-203ENST00000563367 DPYDQ12882 1025 aa30.6■■■□□ 2.49
NME3-203ENST00000563367 PSMD2Q13200 908 aa30.6■■■□□ 2.49
NME3-203ENST00000563367 KNOP1Q1ED39 458 aaKnown RBP30.6■■■□□ 2.49
NME3-203ENST00000563367 SCARA3Q6AZY7 606 aa30.6■■■□□ 2.49
NME3-203ENST00000563367 CYP26C1Q6V0L0 522 aa30.6■■■□□ 2.49
NME3-203ENST00000563367 SENP8Q96LD8 212 aa30.6■■■□□ 2.49
NME3-203ENST00000563367 NOTCH4Q99466 2003 aa30.59■■■□□ 2.49
NME3-203ENST00000563367 ZNF233A6NK53 670 aa30.59■■■□□ 2.49
NME3-203ENST00000563367 DCXO43602 365 aa30.59■■■□□ 2.49
NME3-203ENST00000563367 ABLIM3O94929 683 aa30.59■■■□□ 2.49
NME3-203ENST00000563367 OAZ2O95190 189 aa30.59■■■□□ 2.49
NME3-203ENST00000563367 SNRPFP62306 86 aaKnown RBP30.59■■■□□ 2.49
NME3-203ENST00000563367 LIN9Q5TKA1 542 aa30.59■■■□□ 2.49
NME3-203ENST00000563367 ZNF280DQ6N043 979 aa30.59■■■□□ 2.49
NME3-203ENST00000563367 FMR1NBQ8N0W7 255 aaPredicted RBP30.59■■■□□ 2.49
NME3-203ENST00000563367 ZNF461Q8TAF7 563 aa30.59■■■□□ 2.49
NME3-203ENST00000563367 SLC7A14Q8TBB6 771 aa30.59■■■□□ 2.49
NME3-203ENST00000563367 CYP2J2P51589 502 aa30.58■■■□□ 2.49
NME3-203ENST00000563367 YWHAHQ04917 246 aaPredicted RBP30.58■■■□□ 2.49
NME3-203ENST00000563367 PPM1LQ5SGD2 360 aa30.58■■■□□ 2.49
NME3-203ENST00000563367 CCDC149Q6ZUS6 474 aa30.58■■■□□ 2.49
NME3-203ENST00000563367 HS2ST1Q7LGA3 356 aa30.58■■■□□ 2.49
NME3-203ENST00000563367 C1orf127Q8N9H9 656 aa30.58■■■□□ 2.49
NME3-203ENST00000563367 PIDD1Q9HB75 910 aa30.58■■■□□ 2.49
NME3-203ENST00000563367 WDR6Q9NNW5 1121 aaKnown RBP30.58■■■□□ 2.49
NME3-203ENST00000563367 PTPRJQ12913 1337 aa30.57■■■□□ 2.48
NME3-203ENST00000563367 ALADP13716 330 aa30.57■■■□□ 2.48
NME3-203ENST00000563367 RDH13Q8NBN7 331 aa30.57■■■□□ 2.48
NME3-203ENST00000563367 CXorf38Q8TB03 319 aa30.57■■■□□ 2.48
NME3-203ENST00000563367 CACTINQ8WUQ7 758 aaKnown RBP30.57■■■□□ 2.48
NME3-203ENST00000563367 BORCS6Q96GS4 357 aa30.57■■■□□ 2.48
NME3-203ENST00000563367 KIAA1586Q9HCI6 787 aa30.57■■■□□ 2.48
NME3-203ENST00000563367 CIZ1Q9ULV3 898 aaPredicted RBP30.57■■■□□ 2.48
NME3-203ENST00000563367 USTQ9Y2C2 406 aa30.57■■■□□ 2.48
NME3-203ENST00000563367 GOLGA6L4A6NEF3 574 aa30.56■■■□□ 2.48
NME3-203ENST00000563367 HNRNPA1P09651 372 aaKnown RBP eCLIP30.56■■■□□ 2.48
NME3-203ENST00000563367 TYMPP19971 482 aa30.56■■■□□ 2.48
NME3-203ENST00000563367 PAX3P23760 479 aa30.56■■■□□ 2.48
NME3-203ENST00000563367 TAF6P49848 677 aa30.56■■■□□ 2.48
NME3-203ENST00000563367 SNRNP35Q16560 246 aaKnown RBP30.56■■■□□ 2.48
NME3-203ENST00000563367 LMBRD2Q68DH5 695 aaPredicted RBP30.56■■■□□ 2.48
NME3-203ENST00000563367 C12orf56Q8IXR9 622 aa30.56■■■□□ 2.48
NME3-203ENST00000563367 TDRD5Q8NAT2 981 aaKnown RBP30.56■■■□□ 2.48
NME3-203ENST00000563367 C11orf16Q9NQ32 467 aa30.56■■■□□ 2.48
NME3-203ENST00000563367 CLUHO75153 1309 aa30.55■■■□□ 2.48
NME3-203ENST00000563367 CCL16O15467 120 aa30.55■■■□□ 2.48
NME3-203ENST00000563367 RHOBTB3O94955 611 aa30.55■■■□□ 2.48
NME3-203ENST00000563367 ITGB3P05106 788 aa30.55■■■□□ 2.48
NME3-203ENST00000563367 POLR2BP30876 1174 aaKnown RBP30.55■■■□□ 2.48
NME3-203ENST00000563367 HOXA9P31269 272 aa30.55■■■□□ 2.48
NME3-203ENST00000563367 SNW1Q13573 536 aaKnown RBP30.55■■■□□ 2.48
NME3-203ENST00000563367 UVSSAQ2YD98 709 aa30.55■■■□□ 2.48
NME3-203ENST00000563367 USP37Q86T82 979 aa30.55■■■□□ 2.48
NME3-203ENST00000563367 XXYLT1Q8NBI6 393 aa30.55■■■□□ 2.48
NME3-203ENST00000563367 ENGASEQ8NFI3 743 aa30.55■■■□□ 2.48
NME3-203ENST00000563367 OR5B17Q8NGF7 314 aa30.55■■■□□ 2.48
NME3-203ENST00000563367 MTMR12Q9C0I1 747 aa30.55■■■□□ 2.48
NME3-203ENST00000563367 KCTD10Q9H3F6 313 aa30.55■■■□□ 2.48
NME3-203ENST00000563367 CGNQ9P2M7 1197 aaKnown RBP30.55■■■□□ 2.48
NME3-203ENST00000563367 AGAP1Q9UPQ3 857 aa30.55■■■□□ 2.48
NME3-203ENST00000563367 N4BP1O75113 896 aaKnown RBP30.54■■■□□ 2.48
NME3-203ENST00000563367 SEC24AO95486 1093 aa30.54■■■□□ 2.48
NME3-203ENST00000563367 ODC1P11926 461 aa30.54■■■□□ 2.48
NME3-203ENST00000563367 ATF2P15336 505 aa30.54■■■□□ 2.48
NME3-203ENST00000563367 OVOS1Q6IE37 1185 aa30.54■■■□□ 2.48
NME3-203ENST00000563367 C1QTNF1Q9BXJ1 281 aa30.54■■■□□ 2.48
NME3-203ENST00000563367 INTS13Q9NVM9 706 aa30.54■■■□□ 2.48
NME3-203ENST00000563367 SIX4Q9UIU6 781 aa30.54■■■□□ 2.48
NME3-203ENST00000563367 FAM86C2PA6NEL3 165 aa30.53■■■□□ 2.48
NME3-203ENST00000563367 CYB561D2O14569 222 aa30.53■■■□□ 2.48
NME3-203ENST00000563367 CYP11A1P05108 521 aa30.53■■■□□ 2.48
NME3-203ENST00000563367 OR4Q2P0C623 313 aa30.53■■■□□ 2.48
NME3-203ENST00000563367 SURF1Q15526 300 aa30.53■■■□□ 2.48
NME3-203ENST00000563367 TPGS2Q68CL5 300 aa30.53■■■□□ 2.48
NME3-203ENST00000563367 GRASPQ7Z6J2 395 aaPredicted RBP30.53■■■□□ 2.48
NME3-203ENST00000563367 ZDHHC14Q8IZN3 488 aa30.53■■■□□ 2.48
NME3-203ENST00000563367 CSGALNACT2Q8N6G5 542 aa30.53■■■□□ 2.48
NME3-203ENST00000563367 KPNA7A9QM74 516 aa30.52■■■□□ 2.48
NME3-203ENST00000563367 NTHL1P78549 312 aa30.52■■■□□ 2.48
NME3-203ENST00000563367 CYP24A1Q07973 514 aa30.52■■■□□ 2.48
NME3-203ENST00000563367 SV2CQ496J9 727 aa30.52■■■□□ 2.48
NME3-203ENST00000563367 RNF19BQ6ZMZ0 732 aa30.52■■■□□ 2.48
NME3-203ENST00000563367 RTL10Q7L3V2 364 aa30.52■■■□□ 2.48
NME3-203ENST00000563367 OTOP3Q7RTS5 596 aa30.52■■■□□ 2.48
NME3-203ENST00000563367 CCDC47Q96A33 483 aaKnown RBP30.52■■■□□ 2.48
NME3-203ENST00000563367 ZNF560Q96MR9 790 aa30.52■■■□□ 2.48
NME3-203ENST00000563367 LIMD1Q9UGP4 676 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms