RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 RNF10Q8N5U6 811 aaKnown RBP10.42□□□□□ -0.74
UBFD1-202ENST00000563366 KLHDC9Q8NEP7 349 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 TRIM58Q8NG06 486 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 SHC3Q92529 594 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 ACAP3Q96P50 834 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 ALS2CR12Q96Q35 445 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 POP1Q99575 1024 aaKnown RBP10.42□□□□□ -0.74
UBFD1-202ENST00000563366 OSMRQ99650 979 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 TSEN34Q9BSV6 310 aaKnown RBP10.42□□□□□ -0.74
UBFD1-202ENST00000563366 TRAIPQ9BWF2 469 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 TRIM6Q9C030 488 aaPredicted RBP10.42□□□□□ -0.74
UBFD1-202ENST00000563366 PLEKHA5Q9HAU0 1116 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 DNAI1Q9UI46 699 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 NOD1Q9Y239 953 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 GINS2Q9Y248 185 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 USTQ9Y2C2 406 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 DERAQ9Y315 318 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 C2CD2Q9Y426 696 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 PCDHA13Q9Y5I0 950 aa10.42□□□□□ -0.74
UBFD1-202ENST00000563366 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.42□□□□□ -0.74
UBFD1-202ENST00000563366 MROH7Q68CQ1 1323 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 MYADML2A6NDP7 307 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 XPOTO43592 962 aaKnown RBP10.41□□□□□ -0.74
UBFD1-202ENST00000563366 CAND2O75155 1236 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 CLSTN1O94985 981 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 IQCF3P0C7M6 154 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 P4HA1P13674 534 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 CCND3P30281 292 aaPredicted RBP10.41□□□□□ -0.74
UBFD1-202ENST00000563366 ATICP31939 592 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 GRK4P32298 578 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 NOP14P78316 857 aaKnown RBP10.41□□□□□ -0.74
UBFD1-202ENST00000563366 MRPS6P82932 125 aaKnown RBP10.41□□□□□ -0.74
UBFD1-202ENST00000563366 GFPT1Q06210 699 aaPredicted RBP10.41□□□□□ -0.74
UBFD1-202ENST00000563366 SNX17Q15036 470 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 NAB2Q15742 525 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 KCNA10Q16322 511 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 SGSM1Q2NKQ1 1148 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 ZBTB41Q5SVQ8 909 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 GJB7Q6PEY0 223 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 RUFY4Q6ZNE9 571 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 TRAPPC11Q7Z392 1133 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 SERINC5Q86VE9 423 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 ZNF677Q86XU0 584 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 ARHGEF19Q8IW93 802 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 FAM71AQ8IYT1 594 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 HACE1Q8IYU2 909 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 ARRDC4Q8NCT1 418 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 HELQQ8TDG4 1101 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 ZNF296Q8WUU4 475 aaPredicted RBP10.41□□□□□ -0.74
UBFD1-202ENST00000563366 SEMA4DQ92854 862 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 SECISBP2LQ93073 1101 aaKnown RBP10.41□□□□□ -0.74
UBFD1-202ENST00000563366 ZNF668Q96K58 619 aaPredicted RBP10.41□□□□□ -0.74
UBFD1-202ENST00000563366 GLT1D1Q96MS3 346 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 PPP1R16BQ96T49 567 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 CELF4Q9BZC1 486 aaKnown RBP10.41□□□□□ -0.74
UBFD1-202ENST00000563366 GPR88Q9GZN0 384 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 ADAMTS1Q9UHI8 967 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 GUCA1BQ9UMX6 200 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 REXO2Q9Y3B8 237 aaKnown RBP10.41□□□□□ -0.74
UBFD1-202ENST00000563366 TRPV2Q9Y5S1 764 aa10.41□□□□□ -0.74
UBFD1-202ENST00000563366 PTPRJQ12913 1337 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 A0A087X0T9 212 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 ANO9A1A5B4 782 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 CTAGE9A4FU28 777 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 BTNL10A8MVZ5 291 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 LRRN2O75325 713 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 TACC1O75410 805 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 ASS1P00966 412 aaKnown RBP10.4□□□□□ -0.74
UBFD1-202ENST00000563366 INHAP05111 366 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 FAM228BP0C875 321 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 CXCL8P10145 99 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 TNFAIP3P21580 790 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 FSHRP23945 695 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 ARHGAP25P42331 645 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 TFAMQ00059 246 aaKnown RBP10.4□□□□□ -0.74
UBFD1-202ENST00000563366 CYP27A1Q02318 531 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 CUL2Q13617 745 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 TMEM132DQ14C87 1099 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 INTS6LQ5JSJ4 861 aaKnown RBP10.4□□□□□ -0.74
UBFD1-202ENST00000563366 CCSAPQ6IQ19 270 aaPredicted RBP10.4□□□□□ -0.74
UBFD1-202ENST00000563366 ALKBH5Q6P6C2 394 aaKnown RBP10.4□□□□□ -0.74
UBFD1-202ENST00000563366 FAM43BQ6ZT52 329 aaPredicted RBP10.4□□□□□ -0.74
UBFD1-202ENST00000563366 ZNF571Q7Z3V5 609 aaPredicted RBP10.4□□□□□ -0.74
UBFD1-202ENST00000563366 TTC39CQ8N584 583 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 CPB2Q96IY4 423 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 NOX5Q96PH1 765 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 CDK15Q96Q40 435 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 MTMR12Q9C0I1 747 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 NIF3L1Q9GZT8 377 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 NAGPAQ9UK23 515 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 AJAP1Q9UKB5 411 aaPredicted RBP10.4□□□□□ -0.74
UBFD1-202ENST00000563366 ITGA11Q9UKX5 1188 aa10.4□□□□□ -0.74
UBFD1-202ENST00000563366 PIN4Q9Y237 131 aaKnown RBP10.4□□□□□ -0.74
UBFD1-202ENST00000563366 A0A0A6YYK5 440 aaPredicted RBP10.39□□□□□ -0.75
UBFD1-202ENST00000563366 KBTBD13C9JR72 458 aa10.39□□□□□ -0.75
UBFD1-202ENST00000563366 FOXN3O00409 490 aaPredicted RBP10.39□□□□□ -0.75
UBFD1-202ENST00000563366 ZNF263O14978 683 aa10.39□□□□□ -0.75
UBFD1-202ENST00000563366 VNN1O95497 513 aa10.39□□□□□ -0.75
UBFD1-202ENST00000563366 STAU1O95793 577 aaKnown RBP10.39□□□□□ -0.75
UBFD1-202ENST00000563366 USP8P40818 1118 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms