RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 AKR1A1P14550 325 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 PLA2G4AP47712 749 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 GUCY2FP51841 1108 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 PURAQ00577 322 aaKnown RBP10.04□□□□□ -0.8
LINC00838-201ENST00000562956 SLC7A5Q01650 507 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 CENPCQ03188 943 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 LLGL2Q6P1M3 1020 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 CATSPER4Q7RTX7 472 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 TMEM40Q8WWA1 233 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 ZNF606Q8WXB4 792 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 TRIB2Q92519 343 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 ALG3Q92685 438 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 ACAP3Q96P50 834 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 ZSWIM1Q9BR11 485 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 ADPGKQ9BRR6 497 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 SELENOOQ9BVL4 669 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 EIF2AQ9BY44 585 aaKnown RBP10.04□□□□□ -0.8
LINC00838-201ENST00000562956 ASB7Q9H672 318 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 GPBP1L1Q9HC44 474 aaPredicted RBP10.04□□□□□ -0.8
LINC00838-201ENST00000562956 DMGDHQ9UI17 866 aaKnown RBP10.04□□□□□ -0.8
LINC00838-201ENST00000562956 TMEM59LQ9UK28 342 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 KIF3CO14782 793 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 NPTXRO95502 500 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 TUBBP07437 444 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 DARSP14868 501 aaKnown RBP10.04□□□□□ -0.8
LINC00838-201ENST00000562956 COMTP21964 271 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 RRM1P23921 792 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 NSFP46459 744 aaKnown RBP10.04□□□□□ -0.8
LINC00838-201ENST00000562956 RAP1GAPP47736 663 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 FCGRTP55899 365 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 NOMO3P69849 1222 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 CAP1Q01518 475 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 POU5F1Q01860 360 aaKnown RBP10.04□□□□□ -0.8
LINC00838-201ENST00000562956 KYAT1Q16773 422 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 WDR72Q3MJ13 1102 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 MON1BQ7L1V2 547 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 RASGEF1CQ8N431 466 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 CALR3Q96L12 384 aaKnown RBP10.04□□□□□ -0.8
LINC00838-201ENST00000562956 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.04□□□□□ -0.8
LINC00838-201ENST00000562956 UVRAGQ9P2Y5 699 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 NOC2LQ9Y3T9 749 aaKnown RBP10.04□□□□□ -0.8
LINC00838-201ENST00000562956 MROH7Q68CQ1 1323 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 PGRMC1O00264 195 aaKnown RBP10.03□□□□□ -0.8
LINC00838-201ENST00000562956 C6orf222P0C671 652 aaPredicted RBP10.03□□□□□ -0.8
LINC00838-201ENST00000562956 CYBAP13498 195 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 GRM5P41594 1212 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 MARCKSL1P49006 195 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 FLT3LGP49771 235 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 LACTBP83111 547 aaPredicted RBP10.03□□□□□ -0.8
LINC00838-201ENST00000562956 CDC42EP1Q00587 391 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 TMEM132DQ14C87 1099 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 SMC1BQ8NDV3 1235 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 KRT35Q92764 455 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.03□□□□□ -0.8
LINC00838-201ENST00000562956 AP1M1Q9BXS5 423 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 FUT8Q9BYC5 575 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 TRIM7Q9C029 511 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 FAM53CQ9NYF3 392 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 C17orf102A2RUQ5 167 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 DUSP11O75319 330 aaKnown RBP10.03□□□□□ -0.8
LINC00838-201ENST00000562956 ERLIN1O75477 346 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 MYBL2P10244 700 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 BRD2P25440 801 aaKnown RBP10.03□□□□□ -0.8
LINC00838-201ENST00000562956 CDH8P55286 799 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 TRIM32Q13049 653 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 CCDC70Q6NSX1 233 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 C8orf74Q6P047 294 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 TFAP2BQ92481 460 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 HHIPL1Q96JK4 782 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 KRT12Q99456 494 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 SDCBP2Q9H190 292 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 PLEKHA4Q9H4M7 779 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 HES2Q9Y543 173 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 EIF4BP23588 611 aaKnown RBP10.03□□□□□ -0.8
LINC00838-201ENST00000562956 POLR2BP30876 1174 aaKnown RBP10.03□□□□□ -0.8
LINC00838-201ENST00000562956 HOXC8P31273 242 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 PRKCZQ05513 592 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 ZNF211Q13398 564 aaPredicted RBP10.03□□□□□ -0.8
LINC00838-201ENST00000562956 SNX17Q15036 470 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 DCAF4L1Q3SXM0 396 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 ZNF667Q5HYK9 610 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 SLC27A1Q6PCB7 646 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 TRIM72Q6ZMU5 477 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 GSPT2Q8IYD1 628 aaKnown RBP10.03□□□□□ -0.8
LINC00838-201ENST00000562956 C7orf31Q8N865 590 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 CD101Q93033 1021 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 RPS6KC1Q96S38 1066 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 C11orf70Q9BRQ4 267 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 KATNAL1Q9BW62 490 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 BCO2Q9BYV7 579 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 SMYD3Q9H7B4 428 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 SNTG2Q9NY99 539 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 L1RE1Q9UN81 338 aa10.03□□□□□ -0.8
LINC00838-201ENST00000562956 AOC2O75106 756 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 PGK1P00558 417 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 FGGP02679 453 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 MYBL1P10243 752 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 ITGA4P13612 1032 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 PTP4A2Q12974 167 aa10.02□□□□□ -0.81
LINC00838-201ENST00000562956 GNASQ5JWF2 1037 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms