RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 CLEC2LP0C7M8 214 aa5.91□□□□□ -1.46
SMG1-206ENST00000562668 APOBEC3AP31941 199 aaPredicted RBP5.91□□□□□ -1.46
SMG1-206ENST00000562668 TIGD2Q4W5G0 525 aa5.91□□□□□ -1.46
SMG1-206ENST00000562668 CCDC62Q6P9F0 684 aa5.91□□□□□ -1.46
SMG1-206ENST00000562668 DEFB132Q7Z7B7 95 aa5.91□□□□□ -1.46
SMG1-206ENST00000562668 KIAA0907Q7Z7F0 614 aaPredicted RBP5.91□□□□□ -1.46
SMG1-206ENST00000562668 LYSMD2Q8IV50 215 aa5.91□□□□□ -1.46
SMG1-206ENST00000562668 SLC41A1Q8IVJ1 513 aa5.91□□□□□ -1.46
SMG1-206ENST00000562668 OR14C36Q8NHC7 312 aa5.91□□□□□ -1.46
SMG1-206ENST00000562668 PIGBQ92521 554 aa5.91□□□□□ -1.46
SMG1-206ENST00000562668 SLC5A5Q92911 643 aa5.91□□□□□ -1.46
SMG1-206ENST00000562668 CRAMP1Q96RY5 1269 aa5.91□□□□□ -1.46
SMG1-206ENST00000562668 ANO3Q9BYT9 981 aa5.91□□□□□ -1.46
SMG1-206ENST00000562668 ZNF768Q9H5H4 540 aaKnown RBP5.91□□□□□ -1.46
SMG1-206ENST00000562668 CLCA2Q9UQC9 943 aa5.91□□□□□ -1.46
SMG1-206ENST00000562668 C5P01031 1676 aa5.91□□□□□ -1.46
SMG1-206ENST00000562668 AHRRA9YTQ3 701 aa5.9□□□□□ -1.46
SMG1-206ENST00000562668 PRR5-ARHGAP8B1AHC4 643 aa5.9□□□□□ -1.46
SMG1-206ENST00000562668 ERVV-2B6SEH9 535 aa5.9□□□□□ -1.46
SMG1-206ENST00000562668 RAB11FIP3O75154 756 aa5.9□□□□□ -1.46
SMG1-206ENST00000562668 TMEM127O75204 238 aa5.9□□□□□ -1.46
SMG1-206ENST00000562668 LAG3P18627 525 aa5.9□□□□□ -1.46
SMG1-206ENST00000562668 PROZP22891 400 aa5.9□□□□□ -1.46
SMG1-206ENST00000562668 TMPOP42166 694 aaKnown RBP5.9□□□□□ -1.46
SMG1-206ENST00000562668 TRIM25Q14258 630 aaKnown RBP5.9□□□□□ -1.46
SMG1-206ENST00000562668 UBE3CQ15386 1083 aa5.9□□□□□ -1.46
SMG1-206ENST00000562668 BROXQ5VW32 411 aa5.9□□□□□ -1.46
SMG1-206ENST00000562668 GPRIN1Q7Z2K8 1008 aa5.9□□□□□ -1.46
SMG1-206ENST00000562668 VRK3Q8IV63 474 aa5.9□□□□□ -1.46
SMG1-206ENST00000562668 CCDC146Q8IYE0 955 aa5.9□□□□□ -1.46
SMG1-206ENST00000562668 RUNDC1Q96C34 613 aa5.9□□□□□ -1.46
SMG1-206ENST00000562668 CDY2AQ9Y6F7 541 aa5.9□□□□□ -1.46
SMG1-206ENST00000562668 QSER1Q2KHR3 1735 aa5.9□□□□□ -1.47
SMG1-206ENST00000562668 HTATSF1O43719 755 aaKnown RBP5.89□□□□□ -1.47
SMG1-206ENST00000562668 RHOBTB3O94955 611 aa5.89□□□□□ -1.47
SMG1-206ENST00000562668 HSP90AB1P08238 724 aaKnown RBP5.89□□□□□ -1.47
SMG1-206ENST00000562668 HSP90B1P14625 803 aaKnown RBP5.89□□□□□ -1.47
SMG1-206ENST00000562668 DCTN1Q14203 1278 aa5.89□□□□□ -1.47
SMG1-206ENST00000562668 WDR43Q15061 677 aaKnown RBP eCLIP5.89□□□□□ -1.47
SMG1-206ENST00000562668 EZH2Q15910 746 aaKnown RBP5.89□□□□□ -1.47
SMG1-206ENST00000562668 PITRM1Q5JRX3 1037 aa5.89□□□□□ -1.47
SMG1-206ENST00000562668 GDF7Q7Z4P5 450 aa5.89□□□□□ -1.47
SMG1-206ENST00000562668 XYLT1Q86Y38 959 aa5.89□□□□□ -1.47
SMG1-206ENST00000562668 MYEOVQ96EZ4 313 aa5.89□□□□□ -1.47
SMG1-206ENST00000562668 DCLRE1CQ96SD1 692 aaKnown RBP5.89□□□□□ -1.47
SMG1-206ENST00000562668 CDC5LQ99459 802 aaKnown RBP5.89□□□□□ -1.47
SMG1-206ENST00000562668 PRDM12Q9H4Q4 367 aa5.89□□□□□ -1.47
SMG1-206ENST00000562668 TRPM5Q9NZQ8 1165 aa5.89□□□□□ -1.47
SMG1-206ENST00000562668 KCNG1Q9UIX4 513 aa5.89□□□□□ -1.47
SMG1-206ENST00000562668 CHST2Q9Y4C5 530 aa5.89□□□□□ -1.47
SMG1-206ENST00000562668 COL24A1Q17RW2 1714 aa5.88□□□□□ -1.47
SMG1-206ENST00000562668 CASZ1Q86V15 1759 aa5.88□□□□□ -1.47
SMG1-206ENST00000562668 CENPVL1A0A0U1RR11 272 aa5.88□□□□□ -1.47
SMG1-206ENST00000562668 B5MCH6 92 aa5.88□□□□□ -1.47
SMG1-206ENST00000562668 APAF1O14727 1248 aa5.88□□□□□ -1.47
SMG1-206ENST00000562668 B3GALT2O43825 422 aa5.88□□□□□ -1.47
SMG1-206ENST00000562668 BMP5P22003 454 aa5.88□□□□□ -1.47
SMG1-206ENST00000562668 PTTG1IPP53801 180 aa5.88□□□□□ -1.47
SMG1-206ENST00000562668 FAM189BP81408 668 aa5.88□□□□□ -1.47
SMG1-206ENST00000562668 APBA1Q02410 837 aa5.88□□□□□ -1.47
SMG1-206ENST00000562668 ATP13A4Q4VNC1 1196 aa5.88□□□□□ -1.47
SMG1-206ENST00000562668 C1orf141Q5JVX7 400 aa5.88□□□□□ -1.47
SMG1-206ENST00000562668 MCM10Q7L590 875 aa5.88□□□□□ -1.47
SMG1-206ENST00000562668 RASSF3Q86WH2 238 aa5.88□□□□□ -1.47
SMG1-206ENST00000562668 LILRA3Q8N6C8 439 aaPredicted RBP5.88□□□□□ -1.47
SMG1-206ENST00000562668 OR10H5Q8NGA6 315 aa5.88□□□□□ -1.47
SMG1-206ENST00000562668 LEO1Q8WVC0 666 aaPredicted RBP5.88□□□□□ -1.47
SMG1-206ENST00000562668 THUMPD2Q9BTF0 503 aaKnown RBP5.88□□□□□ -1.47
SMG1-206ENST00000562668 KCTD10Q9H3F6 313 aa5.88□□□□□ -1.47
SMG1-206ENST00000562668 ASAP1Q9ULH1 1129 aa5.88□□□□□ -1.47
SMG1-206ENST00000562668 RRP7AQ9Y3A4 280 aaKnown RBP5.88□□□□□ -1.47
SMG1-206ENST00000562668 NOC2LQ9Y3T9 749 aaKnown RBP5.88□□□□□ -1.47
SMG1-206ENST00000562668 PALLDQ8WX93 1383 aa5.88□□□□□ -1.47
SMG1-206ENST00000562668 HEG1Q9ULI3 1381 aa5.88□□□□□ -1.47
SMG1-206ENST00000562668 C4BP0C0L5 1744 aa5.88□□□□□ -1.47
SMG1-206ENST00000562668 LAMB4A4D0S4 1761 aa5.88□□□□□ -1.47
SMG1-206ENST00000562668 UBR3Q6ZT12 1888 aa5.88□□□□□ -1.47
SMG1-206ENST00000562668 MYH14Q7Z406 1995 aaKnown RBP5.87□□□□□ -1.47
SMG1-206ENST00000562668 A0A087X0B3 334 aa5.87□□□□□ -1.47
SMG1-206ENST00000562668 ENPP3O14638 875 aa5.87□□□□□ -1.47
SMG1-206ENST00000562668 KCNQ3O43525 872 aa5.87□□□□□ -1.47
SMG1-206ENST00000562668 PDE8AO60658 829 aa5.87□□□□□ -1.47
SMG1-206ENST00000562668 ITGA10O75578 1167 aa5.87□□□□□ -1.47
SMG1-206ENST00000562668 ZNF853P0CG23 659 aa5.87□□□□□ -1.47
SMG1-206ENST00000562668 ADRA1BP35368 520 aa5.87□□□□□ -1.47
SMG1-206ENST00000562668 RIPK4P57078 832 aa5.87□□□□□ -1.47
SMG1-206ENST00000562668 TXNRD1Q16881 649 aa5.87□□□□□ -1.47
SMG1-206ENST00000562668 C19orf54Q5BKX5 351 aa5.87□□□□□ -1.47
SMG1-206ENST00000562668 HECTD2Q5U5R9 776 aa5.87□□□□□ -1.47
SMG1-206ENST00000562668 DRICH1Q6PGQ1 229 aaPredicted RBP5.87□□□□□ -1.47
SMG1-206ENST00000562668 SNX33Q8WV41 574 aa5.87□□□□□ -1.47
SMG1-206ENST00000562668 PNNQ9H307 717 aaKnown RBP5.87□□□□□ -1.47
SMG1-206ENST00000562668 SPON1Q9HCB6 807 aa5.87□□□□□ -1.47
SMG1-206ENST00000562668 TMOD3Q9NYL9 352 aa5.87□□□□□ -1.47
SMG1-206ENST00000562668 PACSIN3Q9UKS6 424 aa5.87□□□□□ -1.47
SMG1-206ENST00000562668 MAPRE3Q9UPY8 281 aa5.87□□□□□ -1.47
SMG1-206ENST00000562668 ZNF521Q96K83 1311 aa5.87□□□□□ -1.47
SMG1-206ENST00000562668 MAPK8IP3Q9UPT6 1336 aa5.87□□□□□ -1.47
SMG1-206ENST00000562668 KAT6BQ8WYB5 2073 aa5.87□□□□□ -1.47
SMG1-206ENST00000562668 GAGE12BA1L429 117 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms