RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 HPDLQ96IR7 371 aa17.62■□□□□ 0.41
USB1-206ENST00000562534 SENP8Q96LD8 212 aa17.62■□□□□ 0.41
USB1-206ENST00000562534 EMILIN2Q9BXX0 1053 aa17.62■□□□□ 0.41
USB1-206ENST00000562534 TMEM8AQ9HCN3 771 aa17.62■□□□□ 0.41
USB1-206ENST00000562534 MAGEC2Q9UBF1 373 aaPredicted RBP17.62■□□□□ 0.41
USB1-206ENST00000562534 DSEQ9UL01 958 aa17.62■□□□□ 0.41
USB1-206ENST00000562534 PCDHB8Q9UN66 801 aa17.62■□□□□ 0.41
USB1-206ENST00000562534 ANK1P16157 1881 aa17.62■□□□□ 0.41
USB1-206ENST00000562534 PDCD11Q14690 1871 aaKnown RBP17.61■□□□□ 0.41
USB1-206ENST00000562534 CHD9Q3L8U1 2897 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 FSD2A1L4K1 749 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 C2orf71A6NGG8 1288 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 H7C4K7 107 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 CYB561D2O14569 222 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 SPTLC1O15269 473 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 NCK2O43639 380 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 STAU1O95793 577 aaKnown RBP17.61■□□□□ 0.41
USB1-206ENST00000562534 CAVIN2O95810 425 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 TRIM49P0CI25 452 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 TRIM49CP0CI26 452 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 CA8P35219 290 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 GCLMP48507 274 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 PPP3CAQ08209 521 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 NCOA4Q13772 614 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 ZSCAN23Q3MJ62 389 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 DCAF17Q5H9S7 520 aaPredicted RBP17.61■□□□□ 0.41
USB1-206ENST00000562534 TDRD10Q5VZ19 366 aaKnown RBP17.61■□□□□ 0.41
USB1-206ENST00000562534 PLPP4Q5VZY2 271 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 DPH6Q7L8W6 267 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 RIN2Q8WYP3 895 aaPredicted RBP17.61■□□□□ 0.41
USB1-206ENST00000562534 PIK3R5Q8WYR1 880 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 TAF4BQ92750 862 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 SLC35C1Q96A29 364 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 CDCA3Q99618 268 aaPredicted RBP17.61■□□□□ 0.41
USB1-206ENST00000562534 BPIFA3Q9BQP9 254 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 OXCT2Q9BYC2 517 aaPredicted RBP17.61■□□□□ 0.41
USB1-206ENST00000562534 DNAJC25Q9H1X3 360 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 TLE6Q9H808 572 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 RXFP1Q9HBX9 757 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 GDAP2Q9NXN4 497 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 FNIP2Q9P278 1114 aa17.61■□□□□ 0.41
USB1-206ENST00000562534 SMTNL1A8MU46 457 aa17.6■□□□□ 0.41
USB1-206ENST00000562534 I3L4J1 428 aa17.6■□□□□ 0.41
USB1-206ENST00000562534 C2CD2LO14523 706 aa17.6■□□□□ 0.41
USB1-206ENST00000562534 PMM2O15305 246 aa17.6■□□□□ 0.41
USB1-206ENST00000562534 FAM163BP0C2L3 166 aa17.6■□□□□ 0.41
USB1-206ENST00000562534 ODC1P11926 461 aa17.6■□□□□ 0.41
USB1-206ENST00000562534 TYMPP19971 482 aa17.6■□□□□ 0.41
USB1-206ENST00000562534 CETN1Q12798 172 aa17.6■□□□□ 0.41
USB1-206ENST00000562534 PTPN14Q15678 1187 aa17.6■□□□□ 0.41
USB1-206ENST00000562534 ANO6Q4KMQ2 910 aa17.6■□□□□ 0.41
USB1-206ENST00000562534 C11orf57Q6ZUT1 292 aaPredicted RBP17.6■□□□□ 0.41
USB1-206ENST00000562534 METTL23Q86XA0 190 aa17.6■□□□□ 0.41
USB1-206ENST00000562534 IRF2BP1Q8IU81 584 aa17.6■□□□□ 0.41
USB1-206ENST00000562534 TRIM59Q8IWR1 403 aa17.6■□□□□ 0.41
USB1-206ENST00000562534 LNX1Q8TBB1 728 aaPredicted RBP17.6■□□□□ 0.41
USB1-206ENST00000562534 FAM84AQ96KN4 292 aa17.6■□□□□ 0.41
USB1-206ENST00000562534 FUCA2Q9BTY2 467 aa17.6■□□□□ 0.41
USB1-206ENST00000562534 STXBP5LQ9Y2K9 1186 aa17.6■□□□□ 0.41
USB1-206ENST00000562534 NFE2L3Q9Y4A8 694 aa17.6■□□□□ 0.41
USB1-206ENST00000562534 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.6■□□□□ 0.41
USB1-206ENST00000562534 PLXNA4Q9HCM2 1894 aa17.59■□□□□ 0.41
USB1-206ENST00000562534 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.59■□□□□ 0.41
USB1-206ENST00000562534 HIDE1A8MVS5 230 aa17.59■□□□□ 0.41
USB1-206ENST00000562534 HUS1O60921 280 aa17.59■□□□□ 0.41
USB1-206ENST00000562534 N4BP1O75113 896 aaKnown RBP17.59■□□□□ 0.41
USB1-206ENST00000562534 OAZ2O95190 189 aa17.59■□□□□ 0.41
USB1-206ENST00000562534 CSPG5O95196 566 aa17.59■□□□□ 0.41
USB1-206ENST00000562534 C1RP00736 705 aa17.59■□□□□ 0.41
USB1-206ENST00000562534 CYP11A1P05108 521 aa17.59■□□□□ 0.41
USB1-206ENST00000562534 PRKCSHP14314 528 aaPredicted RBP17.59■□□□□ 0.41
USB1-206ENST00000562534 TKTP29401 623 aaKnown RBP17.59■□□□□ 0.41
USB1-206ENST00000562534 MYL6P60660 151 aa17.59■□□□□ 0.41
USB1-206ENST00000562534 MYL5Q02045 173 aa17.59■□□□□ 0.41
USB1-206ENST00000562534 YWHAHQ04917 246 aaPredicted RBP17.59■□□□□ 0.41
USB1-206ENST00000562534 MRPL58Q14197 206 aaKnown RBP17.59■□□□□ 0.41
USB1-206ENST00000562534 WDR72Q3MJ13 1102 aa17.59■□□□□ 0.41
USB1-206ENST00000562534 RTP2Q5QGT7 225 aa17.59■□□□□ 0.41
USB1-206ENST00000562534 SCARA3Q6AZY7 606 aa17.59■□□□□ 0.41
USB1-206ENST00000562534 PPFIBP1Q86W92 1011 aa17.59■□□□□ 0.41
USB1-206ENST00000562534 CCDC150Q8NCX0 1101 aa17.59■□□□□ 0.41
USB1-206ENST00000562534 AUTS2Q8WXX7 1259 aa17.59■□□□□ 0.41
USB1-206ENST00000562534 B3GALT6Q96L58 329 aa17.59■□□□□ 0.41
USB1-206ENST00000562534 KLHL5Q96PQ7 755 aa17.59■□□□□ 0.41
USB1-206ENST00000562534 IMPG2Q9BZV3 1241 aa17.59■□□□□ 0.41
USB1-206ENST00000562534 MMRN2Q9H8L6 949 aa17.59■□□□□ 0.41
USB1-206ENST00000562534 VRTNQ9H8Y1 702 aa17.59■□□□□ 0.41
USB1-206ENST00000562534 SNX9Q9Y5X1 595 aa17.59■□□□□ 0.41
USB1-206ENST00000562534 BACE2Q9Y5Z0 518 aa17.59■□□□□ 0.41
USB1-206ENST00000562534 P4HA2O15460 535 aa17.58■□□□□ 0.4
USB1-206ENST00000562534 VNN1O95497 513 aa17.58■□□□□ 0.4
USB1-206ENST00000562534 CNPP09543 421 aaKnown RBP17.58■□□□□ 0.4
USB1-206ENST00000562534 P4HA1P13674 534 aa17.58■□□□□ 0.4
USB1-206ENST00000562534 KLRC2P26717 231 aa17.58■□□□□ 0.4
USB1-206ENST00000562534 MTIF2P46199 727 aaKnown RBP17.58■□□□□ 0.4
USB1-206ENST00000562534 ZNF165P49910 485 aa17.58■□□□□ 0.4
USB1-206ENST00000562534 MXI1P50539 228 aa17.58■□□□□ 0.4
USB1-206ENST00000562534 KCNH2Q12809 1159 aa17.58■□□□□ 0.4
USB1-206ENST00000562534 PSMD5Q16401 504 aa17.58■□□□□ 0.4
USB1-206ENST00000562534 TCEAL5Q5H9L2 206 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms