RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 GABBR1Q9UBS5 961 aa10.71□□□□□ -0.7
GTF3C1-202ENST00000561623 ERBB3P21860 1342 aa10.71□□□□□ -0.7
GTF3C1-202ENST00000561623 P4HBP07237 508 aaKnown RBP10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 EPC2Q52LR7 807 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 SWSAP1Q6NVH7 229 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 TMEM179Q6ZVK1 233 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 C3orf20Q8ND61 904 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 ACSF2Q96CM8 615 aaPredicted RBP10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 SERPINB12Q96P63 405 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 RMDN3Q96TC7 470 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 SENP7Q9BQF6 1050 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 ATP6V1E1P36543 226 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 QARSP47897 775 aaKnown RBP10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 ZC2HC1CQ53FD0 456 aaPredicted RBP10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 TMCO5AQ8N6Q1 288 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 DNAJC7Q99615 494 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 MTRQ99707 1265 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 EHD4Q9H223 541 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 TASP1Q9H6P5 420 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 SUGT1Q9Y2Z0 365 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 NPHP4O75161 1426 aaPredicted RBP10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 FOXP2O15409 715 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 TMEM253P0C7T8 217 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 TRIM16LQ309B1 348 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 RINLQ6ZS11 566 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 ZNF786Q8N393 782 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 EGFL8Q99944 293 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 MTA3Q9BTC8 594 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 E5RI56 91 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 TBC1D4O60343 1298 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 EYA4O95677 639 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 GLI1P08151 1106 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 S100A5P33763 92 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 SF3B3Q15393 1217 aaKnown RBP10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 MAPK6Q16659 721 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 ENOSF1Q7L5Y1 443 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 LACRTQ9GZZ8 138 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 THAP2Q9H0W7 228 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 HERC5Q9UII4 1024 aaKnown RBP10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 CDYLQ9Y232 598 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 M0R3G1 203 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 LCP1P13796 627 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 NUDT2P50583 147 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 SMTNL2Q2TAL5 461 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 MROH9Q5TGP6 573 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 TTC39BQ5VTQ0 682 aaPredicted RBP10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 PAPD7Q5XG87 772 aaKnown RBP10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 TTC33Q6PID6 262 aaPredicted RBP10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 IZUMO2Q6UXV1 221 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 ATG4AQ8WYN0 398 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 MAGEB18Q96M61 343 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 PRPF18Q99633 342 aaKnown RBP10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 AFF4Q9UHB7 1163 aaKnown RBP10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 MINPP1Q9UNW1 487 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 MYO1GB0I1T2 1018 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 DFFAO00273 331 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 SERPINB1P30740 379 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 MXD4Q14582 209 aaPredicted RBP10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 KLHDC7AQ5VTJ3 777 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 TRAF7Q6Q0C0 670 aa10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 MTDHQ86UE4 582 aaKnown RBP10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 GJD4Q96KN9 370 aaPredicted RBP10.7□□□□□ -0.7
GTF3C1-202ENST00000561623 C16orf96A6NNT2 1141 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 COPAP53621 1224 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 GEMIN4P57678 1058 aaKnown RBP10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 PDAP1Q13442 181 aaKnown RBP10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 ARHGEF26Q96DR7 871 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 CASS4Q9NQ75 786 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 ZNF446Q9NWS9 450 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 HPS5Q9UPZ3 1129 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 PDIA5Q14554 519 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 DDHD1Q8NEL9 900 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 MAD2L2Q9UI95 211 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 AGO2Q9UKV8 859 aaKnown RBP10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 MYO5CQ9NQX4 1742 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 MAP3K13O43283 966 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 RALAP11233 206 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 KIF1BO60333 1816 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 ATP8B3O60423 1300 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 A0A087X0T9 212 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 ZSCAN5CA6NGD5 496 aaPredicted RBP10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 TPST1O60507 370 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 FAM228BP0C875 321 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 MYL2P10916 166 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 ANXA13P27216 316 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 CACNA2D1P54289 1103 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 RNF219Q5W0B1 726 aaPredicted RBP10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 DNAAF5Q86Y56 855 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 NDUFAF2Q8N183 169 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 FAM8A1Q9UBU6 413 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 SNRPAP09012 282 aaKnown RBP10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 MAPK7Q13164 816 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 EFHC2Q5JST6 749 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 ITPRIPL1Q6GPH6 555 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 TMED8Q6PL24 325 aaPredicted RBP10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 VPS50Q96JG6 964 aa10.69□□□□□ -0.7
GTF3C1-202ENST00000561623 TMEM247A6NEH6 219 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 PSMD7P51665 324 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 GRAPQ13588 217 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 CCDC81Q6ZN84 652 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms