RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 CGRRF1Q99675 332 aa12.54□□□□□ -0.4
HERC1-214ENST00000561400 TUBGCP2Q9BSJ2 902 aa12.54□□□□□ -0.4
HERC1-214ENST00000561400 RC3H2Q9HBD1 1191 aaKnown RBP12.54□□□□□ -0.4
HERC1-214ENST00000561400 ST7Q9NRC1 585 aa12.54□□□□□ -0.4
HERC1-214ENST00000561400 MAGEC2Q9UBF1 373 aaPredicted RBP12.54□□□□□ -0.4
HERC1-214ENST00000561400 SCN1AP35498 2009 aa12.54□□□□□ -0.4
HERC1-214ENST00000561400 GJB5O95377 273 aa12.54□□□□□ -0.4
HERC1-214ENST00000561400 ATP2A2P16615 1042 aaKnown RBP12.54□□□□□ -0.4
HERC1-214ENST00000561400 TNNI1P19237 187 aa12.54□□□□□ -0.4
HERC1-214ENST00000561400 TFAMQ00059 246 aaKnown RBP12.54□□□□□ -0.4
HERC1-214ENST00000561400 SOX4Q06945 474 aaPredicted RBP12.54□□□□□ -0.4
HERC1-214ENST00000561400 SURF1Q15526 300 aa12.54□□□□□ -0.4
HERC1-214ENST00000561400 PAN2Q504Q3 1202 aaKnown RBP12.54□□□□□ -0.4
HERC1-214ENST00000561400 WDR49Q8IV35 697 aa12.54□□□□□ -0.4
HERC1-214ENST00000561400 ABI1Q8IZP0 508 aa12.54□□□□□ -0.4
HERC1-214ENST00000561400 RNPC3Q96LT9 517 aaKnown RBP12.54□□□□□ -0.4
HERC1-214ENST00000561400 TMEM117Q9H0C3 514 aa12.54□□□□□ -0.4
HERC1-214ENST00000561400 MTIF3Q9H2K0 278 aaKnown RBP12.54□□□□□ -0.4
HERC1-214ENST00000561400 INTS13Q9NVM9 706 aa12.54□□□□□ -0.4
HERC1-214ENST00000561400 HCSTQ9UBK5 93 aa12.54□□□□□ -0.4
HERC1-214ENST00000561400 LIMA1Q9UHB6 759 aaKnown RBP12.54□□□□□ -0.4
HERC1-214ENST00000561400 C2CD2Q9Y426 696 aa12.54□□□□□ -0.4
HERC1-214ENST00000561400 LRRC10BA6NIK2 292 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 TBKBP1A7MCY6 615 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 HOXA2O43364 376 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 B4GALT3O60512 393 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 THP07101 528 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 GCLMP48507 274 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 GUCY2FP51841 1108 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 ENPEPQ07075 957 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 KCNH2Q12809 1159 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 TMEM132DQ14C87 1099 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 MIIPQ5JXC2 388 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 FAM109BQ6ICB4 259 aaPredicted RBP12.53□□□□□ -0.4
HERC1-214ENST00000561400 LEKR1Q6ZMV7 388 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 ZNF280BQ86YH2 543 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 MYLK4Q86YV6 388 aaPredicted RBP12.53□□□□□ -0.4
HERC1-214ENST00000561400 HERC6Q8IVU3 1022 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 RBM12BQ8IXT5 1001 aaKnown RBP12.53□□□□□ -0.4
HERC1-214ENST00000561400 PHOSPHO2Q8TCD6 241 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 SLC9A7Q96T83 725 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 MTMR12Q9C0I1 747 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 MMRN2Q9H8L6 949 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 GOLGA2P5Q9HBQ8 144 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 TBC1D13Q9NVG8 400 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 TAB2Q9NYJ8 693 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 CACNG4Q9UBN1 327 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 TUBGCP4Q9UGJ1 667 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 KIAA1671Q9BY89 1806 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 DDHD2O94830 711 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 HTRA4P83105 476 aaPredicted RBP12.53□□□□□ -0.4
HERC1-214ENST00000561400 RBBP5Q15291 538 aaKnown RBP12.53□□□□□ -0.4
HERC1-214ENST00000561400 MAN2A1Q16706 1144 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 DUOXA2Q1HG44 320 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 CBWD6Q4V339 395 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 CBWD3Q5JTY5 395 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 CBWD5Q5RIA9 395 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 SV2AQ7L0J3 742 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 VPS16Q9H269 839 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 SPATS2LQ9NUQ6 558 aaKnown RBP12.53□□□□□ -0.4
HERC1-214ENST00000561400 DERAQ9Y315 318 aa12.53□□□□□ -0.4
HERC1-214ENST00000561400 GRXCR1A8MXD5 290 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 C4BPAP04003 597 aaKnown RBP12.52□□□□□ -0.41
HERC1-214ENST00000561400 BMP8BP34820 402 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 C15orf39Q6ZRI6 1047 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 USP37Q86T82 979 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 NT5DC4Q86YG4 428 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 C1orf127Q8N9H9 656 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 URGCPQ8TCY9 931 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 YME1L1Q96TA2 773 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 PAAF1Q9BRP4 392 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 CRACR2AQ9BSW2 395 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 IQCGQ9H095 443 aaKnown RBP12.52□□□□□ -0.41
HERC1-214ENST00000561400 TMCO5BA8MYB1 307 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 TMEM191BP0C7N4 346 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 FMO5P49326 533 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 COPB1P53618 953 aaKnown RBP12.52□□□□□ -0.41
HERC1-214ENST00000561400 TPM4P67936 248 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 DSC1Q08554 894 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 IFT88Q13099 833 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 ZACNQ401N2 412 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 VWA3BQ502W6 1294 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 HSP90B2PQ58FF3 399 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 TDRD10Q5VZ19 366 aaKnown RBP12.52□□□□□ -0.41
HERC1-214ENST00000561400 TRAPPC11Q7Z392 1133 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 CACTIN-AS1Q8N1I8 211 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 PHC3Q8NDX5 983 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 ZBED2Q9BTP6 218 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 PRO3102Q9H379 93 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 NDST4Q9H3R1 872 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 DPP3Q9NY33 737 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 KANSL3Q9P2N6 904 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 DNAJB4Q9UDY4 337 aa12.52□□□□□ -0.41
HERC1-214ENST00000561400 UBQLN1Q9UMX0 589 aaKnown RBP12.52□□□□□ -0.41
HERC1-214ENST00000561400 CHD9Q3L8U1 2897 aa12.51□□□□□ -0.41
HERC1-214ENST00000561400 AP5Z1O43299 807 aa12.51□□□□□ -0.41
HERC1-214ENST00000561400 LRRN2O75325 713 aa12.51□□□□□ -0.41
HERC1-214ENST00000561400 CST3P01034 146 aaPredicted RBP12.51□□□□□ -0.41
HERC1-214ENST00000561400 AFPP02771 609 aaKnown RBP12.51□□□□□ -0.41
HERC1-214ENST00000561400 IGFBP6P24592 240 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms