RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 FOXD4L4Q8WXT5 416 aaPredicted RBP17.33■□□□□ 0.36
LMX1B-204ENST00000561065 HVCN1Q96D96 273 aa17.33■□□□□ 0.36
LMX1B-204ENST00000561065 FAM212AQ96EL1 285 aa17.33■□□□□ 0.36
LMX1B-204ENST00000561065 FAM13BQ9NYF5 915 aa17.33■□□□□ 0.36
LMX1B-204ENST00000561065 INSL5Q9Y5Q6 135 aa17.33■□□□□ 0.36
LMX1B-204ENST00000561065 COL4A2P08572 1712 aa17.33■□□□□ 0.36
LMX1B-204ENST00000561065 PI15O43692 258 aa17.32■□□□□ 0.36
LMX1B-204ENST00000561065 RHOP08100 348 aa17.32■□□□□ 0.36
LMX1B-204ENST00000561065 OR4Q2P0C623 313 aa17.32■□□□□ 0.36
LMX1B-204ENST00000561065 CEBPBP17676 345 aa17.32■□□□□ 0.36
LMX1B-204ENST00000561065 GAP43P17677 238 aa17.32■□□□□ 0.36
LMX1B-204ENST00000561065 ME1P48163 572 aa17.32■□□□□ 0.36
LMX1B-204ENST00000561065 PKP1Q13835 747 aa17.32■□□□□ 0.36
LMX1B-204ENST00000561065 ADALQ6DHV7 355 aa17.32■□□□□ 0.36
LMX1B-204ENST00000561065 RTL10Q7L3V2 364 aa17.32■□□□□ 0.36
LMX1B-204ENST00000561065 TCEAL8Q8IYN2 117 aa17.32■□□□□ 0.36
LMX1B-204ENST00000561065 IQUBQ8NA54 791 aa17.32■□□□□ 0.36
LMX1B-204ENST00000561065 APPL2Q8NEU8 664 aa17.32■□□□□ 0.36
LMX1B-204ENST00000561065 FLCNQ8NFG4 579 aa17.32■□□□□ 0.36
LMX1B-204ENST00000561065 GPR152Q8TDT2 470 aa17.32■□□□□ 0.36
LMX1B-204ENST00000561065 NXPE3Q969Y0 559 aa17.32■□□□□ 0.36
LMX1B-204ENST00000561065 CRISPLD1Q9H336 500 aa17.32■□□□□ 0.36
LMX1B-204ENST00000561065 MFSD1Q9H3U5 465 aa17.32■□□□□ 0.36
LMX1B-204ENST00000561065 MRPL44Q9H9J2 332 aaKnown RBP17.32■□□□□ 0.36
LMX1B-204ENST00000561065 CYP4F11Q9HBI6 524 aa17.32■□□□□ 0.36
LMX1B-204ENST00000561065 OLFML3Q9NRN5 406 aa17.32■□□□□ 0.36
LMX1B-204ENST00000561065 FAM86C1Q9NVL1 165 aa17.32■□□□□ 0.36
LMX1B-204ENST00000561065 SEL1LQ9UBV2 794 aa17.32■□□□□ 0.36
LMX1B-204ENST00000561065 FBXL21Q9UKT6 434 aa17.32■□□□□ 0.36
LMX1B-204ENST00000561065 AGO2Q9UKV8 859 aaKnown RBP17.32■□□□□ 0.36
LMX1B-204ENST00000561065 ANO9A1A5B4 782 aa17.31■□□□□ 0.36
LMX1B-204ENST00000561065 PRRG1O14668 218 aa17.31■□□□□ 0.36
LMX1B-204ENST00000561065 GALR2O43603 387 aaPredicted RBP17.31■□□□□ 0.36
LMX1B-204ENST00000561065 OAZ2O95190 189 aa17.31■□□□□ 0.36
LMX1B-204ENST00000561065 CCR2P41597 374 aa17.31■□□□□ 0.36
LMX1B-204ENST00000561065 MRE11P49959 708 aa17.31■□□□□ 0.36
LMX1B-204ENST00000561065 YWHAHQ04917 246 aaPredicted RBP17.31■□□□□ 0.36
LMX1B-204ENST00000561065 ADCY1Q08828 1119 aa17.31■□□□□ 0.36
LMX1B-204ENST00000561065 TMEM132DQ14C87 1099 aa17.31■□□□□ 0.36
LMX1B-204ENST00000561065 PRSS36Q5K4E3 855 aa17.31■□□□□ 0.36
LMX1B-204ENST00000561065 L1TD1Q5T7N2 865 aaKnown RBP17.31■□□□□ 0.36
LMX1B-204ENST00000561065 C9orf57Q5W0N0 161 aa17.31■□□□□ 0.36
LMX1B-204ENST00000561065 TPGS2Q68CL5 300 aa17.31■□□□□ 0.36
LMX1B-204ENST00000561065 RNF19BQ6ZMZ0 732 aa17.31■□□□□ 0.36
LMX1B-204ENST00000561065 GLIS3Q8NEA6 775 aa17.31■□□□□ 0.36
LMX1B-204ENST00000561065 BEST2Q8NFU1 509 aa17.31■□□□□ 0.36
LMX1B-204ENST00000561065 PRRX2Q99811 253 aa17.31■□□□□ 0.36
LMX1B-204ENST00000561065 AFF4Q9UHB7 1163 aaKnown RBP17.31■□□□□ 0.36
LMX1B-204ENST00000561065 CA14Q9ULX7 337 aa17.31■□□□□ 0.36
LMX1B-204ENST00000561065 ZFP37Q9Y6Q3 630 aaPredicted RBP17.31■□□□□ 0.36
LMX1B-204ENST00000561065 MIA3Q5JRA6 1907 aa17.3■□□□□ 0.36
LMX1B-204ENST00000561065 XPOTO43592 962 aaKnown RBP17.3■□□□□ 0.36
LMX1B-204ENST00000561065 GCNT3O95395 438 aa17.3■□□□□ 0.36
LMX1B-204ENST00000561065 LRG1P02750 347 aa17.3■□□□□ 0.36
LMX1B-204ENST00000561065 IDEP14735 1019 aa17.3■□□□□ 0.36
LMX1B-204ENST00000561065 CPB1P15086 417 aa17.3■□□□□ 0.36
LMX1B-204ENST00000561065 AOC1P19801 751 aa17.3■□□□□ 0.36
LMX1B-204ENST00000561065 CLCN5P51795 746 aa17.3■□□□□ 0.36
LMX1B-204ENST00000561065 LILRA4P59901 499 aa17.3■□□□□ 0.36
LMX1B-204ENST00000561065 SHC4Q6S5L8 630 aa17.3■□□□□ 0.36
LMX1B-204ENST00000561065 STXBP4Q6ZWJ1 553 aa17.3■□□□□ 0.36
LMX1B-204ENST00000561065 CD302Q8IX05 232 aa17.3■□□□□ 0.36
LMX1B-204ENST00000561065 POMGNT1Q8WZA1 660 aa17.3■□□□□ 0.36
LMX1B-204ENST00000561065 TCEAL4Q96EI5 215 aa17.3■□□□□ 0.36
LMX1B-204ENST00000561065 FAM84AQ96KN4 292 aa17.3■□□□□ 0.36
LMX1B-204ENST00000561065 TSPAN18Q96SJ8 248 aa17.3■□□□□ 0.36
LMX1B-204ENST00000561065 TMEM209Q96SK2 561 aa17.3■□□□□ 0.36
LMX1B-204ENST00000561065 WNT16Q9UBV4 365 aa17.3■□□□□ 0.36
LMX1B-204ENST00000561065 KCNH3Q9ULD8 1083 aa17.3■□□□□ 0.36
LMX1B-204ENST00000561065 DERAQ9Y315 318 aa17.3■□□□□ 0.36
LMX1B-204ENST00000561065 C2CD2Q9Y426 696 aa17.3■□□□□ 0.36
LMX1B-204ENST00000561065 H0Y858 1186 aa17.29■□□□□ 0.36
LMX1B-204ENST00000561065 PIRO00625 290 aa17.29■□□□□ 0.36
LMX1B-204ENST00000561065 ELF1P32519 619 aa17.29■□□□□ 0.36
LMX1B-204ENST00000561065 KRT85P78386 507 aa17.29■□□□□ 0.36
LMX1B-204ENST00000561065 ALCAMQ13740 583 aa17.29■□□□□ 0.36
LMX1B-204ENST00000561065 FOXD4L6Q3SYB3 417 aaPredicted RBP17.29■□□□□ 0.36
LMX1B-204ENST00000561065 SCARA3Q6AZY7 606 aa17.29■□□□□ 0.36
LMX1B-204ENST00000561065 SLFN12LQ6IEE8 588 aa17.29■□□□□ 0.36
LMX1B-204ENST00000561065 FOXD4L3Q6VB84 417 aaPredicted RBP17.29■□□□□ 0.36
LMX1B-204ENST00000561065 HS6ST3Q8IZP7 471 aa17.29■□□□□ 0.36
LMX1B-204ENST00000561065 TTC9BQ8N6N2 239 aa17.29■□□□□ 0.36
LMX1B-204ENST00000561065 HPS3Q969F9 1004 aa17.29■□□□□ 0.36
LMX1B-204ENST00000561065 SAAL1Q96ER3 474 aa17.29■□□□□ 0.36
LMX1B-204ENST00000561065 SENP8Q96LD8 212 aa17.29■□□□□ 0.36
LMX1B-204ENST00000561065 PGLYRP2Q96PD5 576 aa17.29■□□□□ 0.36
LMX1B-204ENST00000561065 KXD1Q9BQD3 176 aa17.29■□□□□ 0.36
LMX1B-204ENST00000561065 CORO1BQ9BR76 489 aa17.29■□□□□ 0.36
LMX1B-204ENST00000561065 ASB7Q9H672 318 aa17.29■□□□□ 0.36
LMX1B-204ENST00000561065 AVENQ9NQS1 362 aaPredicted RBP17.29■□□□□ 0.36
LMX1B-204ENST00000561065 SLC2A4RGQ9NR83 387 aa17.29■□□□□ 0.36
LMX1B-204ENST00000561065 CEP72Q9P209 647 aa17.29■□□□□ 0.36
LMX1B-204ENST00000561065 EXOC7Q9UPT5 735 aa17.29■□□□□ 0.36
LMX1B-204ENST00000561065 MRPS23Q9Y3D9 190 aaKnown RBP17.29■□□□□ 0.36
LMX1B-204ENST00000561065 YIPF1Q9Y548 306 aa17.29■□□□□ 0.36
LMX1B-204ENST00000561065 PCDHB13Q9Y5F0 798 aa17.29■□□□□ 0.36
LMX1B-204ENST00000561065 MOSPD3O75425 235 aa17.28■□□□□ 0.36
LMX1B-204ENST00000561065 TYMPP19971 482 aa17.28■□□□□ 0.36
LMX1B-204ENST00000561065 FCARP24071 287 aa17.28■□□□□ 0.36
LMX1B-204ENST00000561065 TWF1Q12792 350 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms