RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.16□□□□□ -0.3
MARK3-221ENST00000560603 DDX1Q92499 740 aaKnown RBP13.16□□□□□ -0.3
MARK3-221ENST00000560603 DDX12PQ92771 950 aa13.16□□□□□ -0.3
MARK3-221ENST00000560603 C8orf76Q96K31 380 aa13.16□□□□□ -0.3
MARK3-221ENST00000560603 ZSWIM3Q96MP5 696 aa13.16□□□□□ -0.3
MARK3-221ENST00000560603 TBC1D32Q96NH3 1257 aa13.16□□□□□ -0.3
MARK3-221ENST00000560603 CEP72Q9P209 647 aa13.16□□□□□ -0.3
MARK3-221ENST00000560603 ARHGAP28Q9P2N2 729 aa13.16□□□□□ -0.3
MARK3-221ENST00000560603 NOL7Q9UMY1 257 aaKnown RBP13.16□□□□□ -0.3
MARK3-221ENST00000560603 CITO14578 2027 aa13.16□□□□□ -0.3
MARK3-221ENST00000560603 CACNA1GO43497 2377 aa13.15□□□□□ -0.3
MARK3-221ENST00000560603 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.15□□□□□ -0.3
MARK3-221ENST00000560603 DPYSL4O14531 572 aa13.15□□□□□ -0.3
MARK3-221ENST00000560603 EIF5BO60841 1220 aaKnown RBP13.15□□□□□ -0.3
MARK3-221ENST00000560603 MOSPD3O75425 235 aa13.15□□□□□ -0.3
MARK3-221ENST00000560603 KRT37O76014 449 aa13.15□□□□□ -0.3
MARK3-221ENST00000560603 PAPSS2O95340 614 aaPredicted RBP13.15□□□□□ -0.3
MARK3-221ENST00000560603 HARSP12081 509 aaKnown RBP13.15□□□□□ -0.3
MARK3-221ENST00000560603 PROZP22891 400 aa13.15□□□□□ -0.3
MARK3-221ENST00000560603 ALDH1A3P47895 512 aa13.15□□□□□ -0.3
MARK3-221ENST00000560603 EPHB3P54753 998 aa13.15□□□□□ -0.3
MARK3-221ENST00000560603 SATB1Q01826 763 aa13.15□□□□□ -0.3
MARK3-221ENST00000560603 YWHAHQ04917 246 aaPredicted RBP13.15□□□□□ -0.3
MARK3-221ENST00000560603 PTGDRQ13258 359 aa13.15□□□□□ -0.3
MARK3-221ENST00000560603 CSRP2Q16527 193 aa13.15□□□□□ -0.3
MARK3-221ENST00000560603 ECM1Q16610 540 aa13.15□□□□□ -0.3
MARK3-221ENST00000560603 PPM1JQ5JR12 505 aa13.15□□□□□ -0.3
MARK3-221ENST00000560603 DGKKQ5KSL6 1271 aa13.15□□□□□ -0.3
MARK3-221ENST00000560603 HAUS6Q7Z4H7 955 aa13.15□□□□□ -0.3
MARK3-221ENST00000560603 USP37Q86T82 979 aa13.15□□□□□ -0.3
MARK3-221ENST00000560603 LONP2Q86WA8 852 aa13.15□□□□□ -0.3
MARK3-221ENST00000560603 SNX29Q8TEQ0 813 aa13.15□□□□□ -0.3
MARK3-221ENST00000560603 C18orf25Q96B23 403 aaPredicted RBP13.15□□□□□ -0.3
MARK3-221ENST00000560603 TIPINQ9BVW5 301 aa13.15□□□□□ -0.3
MARK3-221ENST00000560603 SEMA4GQ9NTN9 838 aa13.15□□□□□ -0.3
MARK3-221ENST00000560603 YIPF1Q9Y548 306 aa13.15□□□□□ -0.3
MARK3-221ENST00000560603 ASB3Q9Y575 518 aa13.15□□□□□ -0.3
MARK3-221ENST00000560603 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.15□□□□□ -0.3
MARK3-221ENST00000560603 USP24Q9UPU5 2620 aa13.15□□□□□ -0.3
MARK3-221ENST00000560603 TICRRQ7Z2Z1 1910 aa13.14□□□□□ -0.31
MARK3-221ENST00000560603 OR6C75A6NL08 312 aa13.14□□□□□ -0.31
MARK3-221ENST00000560603 CHURC1-FNTBB4DL54 471 aa13.14□□□□□ -0.31
MARK3-221ENST00000560603 XPOTO43592 962 aaKnown RBP13.14□□□□□ -0.31
MARK3-221ENST00000560603 HIP1RO75146 1068 aa13.14□□□□□ -0.31
MARK3-221ENST00000560603 TOM1L1O75674 476 aa13.14□□□□□ -0.31
MARK3-221ENST00000560603 FGF19O95750 216 aa13.14□□□□□ -0.31
MARK3-221ENST00000560603 GJA1P17302 382 aa13.14□□□□□ -0.31
MARK3-221ENST00000560603 FNTBP49356 437 aa13.14□□□□□ -0.31
MARK3-221ENST00000560603 NEK4P51957 841 aa13.14□□□□□ -0.31
MARK3-221ENST00000560603 SMTNP53814 917 aa13.14□□□□□ -0.31
MARK3-221ENST00000560603 NOLC1Q14978 699 aaKnown RBP eCLIP13.14□□□□□ -0.31
MARK3-221ENST00000560603 TEAD2Q15562 447 aa13.14□□□□□ -0.31
MARK3-221ENST00000560603 ST3GAL2Q16842 350 aa13.14□□□□□ -0.31
MARK3-221ENST00000560603 KRT79Q5XKE5 535 aa13.14□□□□□ -0.31
MARK3-221ENST00000560603 RNF19BQ6ZMZ0 732 aa13.14□□□□□ -0.31
MARK3-221ENST00000560603 PRR23CQ6ZRP0 262 aa13.14□□□□□ -0.31
MARK3-221ENST00000560603 CEP68Q76N32 757 aa13.14□□□□□ -0.31
MARK3-221ENST00000560603 RALGPS2Q86X27 583 aaPredicted RBP13.14□□□□□ -0.31
MARK3-221ENST00000560603 SHKBP1Q8TBC3 707 aa13.14□□□□□ -0.31
MARK3-221ENST00000560603 CHAMP1Q96JM3 812 aa13.14□□□□□ -0.31
MARK3-221ENST00000560603 PLEKHA5Q9HAU0 1116 aa13.14□□□□□ -0.31
MARK3-221ENST00000560603 RALGAPA1Q6GYQ0 2036 aa13.13□□□□□ -0.31
MARK3-221ENST00000560603 SDK1Q7Z5N4 2213 aa13.13□□□□□ -0.31
MARK3-221ENST00000560603 A0A1W2PRU2 124 aa13.13□□□□□ -0.31
MARK3-221ENST00000560603 ARNTLO00327 626 aa13.13□□□□□ -0.31
MARK3-221ENST00000560603 SLC16A4O15374 487 aa13.13□□□□□ -0.31
MARK3-221ENST00000560603 CLDN3O15551 220 aa13.13□□□□□ -0.31
MARK3-221ENST00000560603 OAZ2O95190 189 aa13.13□□□□□ -0.31
MARK3-221ENST00000560603 MATR3P43243 847 aaKnown RBP eCLIP13.13□□□□□ -0.313e-11■■■□□ 18.5
MARK3-221ENST00000560603 FCHO2Q0JRZ9 810 aa13.13□□□□□ -0.31
MARK3-221ENST00000560603 ARHGAP29Q52LW3 1261 aa13.13□□□□□ -0.31
MARK3-221ENST00000560603 ARHGAP15Q53QZ3 475 aa13.13□□□□□ -0.31
MARK3-221ENST00000560603 ZPBP2Q6X784 338 aa13.13□□□□□ -0.31
MARK3-221ENST00000560603 TAS1R3Q7RTX0 852 aa13.13□□□□□ -0.31
MARK3-221ENST00000560603 DAW1Q8N136 415 aa13.13□□□□□ -0.31
MARK3-221ENST00000560603 SYNPOQ8N3V7 929 aa13.13□□□□□ -0.31
MARK3-221ENST00000560603 BEST2Q8NFU1 509 aa13.13□□□□□ -0.31
MARK3-221ENST00000560603 SPIRE2Q8WWL2 714 aa13.13□□□□□ -0.31
MARK3-221ENST00000560603 ANKFY1Q9P2R3 1169 aa13.13□□□□□ -0.31
MARK3-221ENST00000560603 MYBPHLA2RUH7 354 aa13.12□□□□□ -0.31
MARK3-221ENST00000560603 SLC38A8A6NNN8 435 aa13.12□□□□□ -0.31
MARK3-221ENST00000560603 H0YCG3 227 aa13.12□□□□□ -0.31
MARK3-221ENST00000560603 M0QZQ0 153 aa13.12□□□□□ -0.31
MARK3-221ENST00000560603 NRG2O14511 850 aaPredicted RBP13.12□□□□□ -0.31
MARK3-221ENST00000560603 ABLIM1O14639 778 aa13.12□□□□□ -0.31
MARK3-221ENST00000560603 HRO43593 1189 aa13.12□□□□□ -0.31
MARK3-221ENST00000560603 CLTAP09496 248 aa13.12□□□□□ -0.31
MARK3-221ENST00000560603 HOXA6P31267 233 aa13.12□□□□□ -0.31
MARK3-221ENST00000560603 PLCB2Q00722 1185 aa13.12□□□□□ -0.31
MARK3-221ENST00000560603 DUSP4Q13115 394 aa13.12□□□□□ -0.31
MARK3-221ENST00000560603 GPR17Q13304 367 aa13.12□□□□□ -0.31
MARK3-221ENST00000560603 GAS6Q14393 721 aa13.12□□□□□ -0.31
MARK3-221ENST00000560603 PTPAQ15257 358 aa13.12□□□□□ -0.31
MARK3-221ENST00000560603 KYAT1Q16773 422 aa13.12□□□□□ -0.31
MARK3-221ENST00000560603 SLC10A6Q3KNW5 377 aa13.12□□□□□ -0.31
MARK3-221ENST00000560603 IL31Q6EBC2 164 aa13.12□□□□□ -0.31
MARK3-221ENST00000560603 RINT1Q6NUQ1 792 aa13.12□□□□□ -0.31
MARK3-221ENST00000560603 DSTYKQ6XUX3 929 aa13.12□□□□□ -0.31
MARK3-221ENST00000560603 ITIH5Q86UX2 942 aa13.12□□□□□ -0.31
MARK3-221ENST00000560603 ARID3BQ8IVW6 561 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms