RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 TPGS2Q68CL5 300 aa11.48□□□□□ -0.57
CDC42BPB-207ENST00000560492 PRR23CQ6ZRP0 262 aa11.48□□□□□ -0.57
CDC42BPB-207ENST00000560492 GPIHBP1Q8IV16 184 aa11.48□□□□□ -0.57
CDC42BPB-207ENST00000560492 TCEAL8Q8IYN2 117 aa11.48□□□□□ -0.57
CDC42BPB-207ENST00000560492 APPL2Q8NEU8 664 aa11.48□□□□□ -0.57
CDC42BPB-207ENST00000560492 TTC8Q8TAM2 541 aa11.48□□□□□ -0.57
CDC42BPB-207ENST00000560492 ZSWIM3Q96MP5 696 aa11.48□□□□□ -0.57
CDC42BPB-207ENST00000560492 ACAP3Q96P50 834 aa11.48□□□□□ -0.57
CDC42BPB-207ENST00000560492 MRPL4Q9BYD3 311 aaKnown RBP11.48□□□□□ -0.57
CDC42BPB-207ENST00000560492 BHMT2Q9H2M3 363 aa11.48□□□□□ -0.57
CDC42BPB-207ENST00000560492 RBM12Q9NTZ6 932 aaKnown RBP11.48□□□□□ -0.57
CDC42BPB-207ENST00000560492 PHLPP2Q6ZVD8 1323 aa11.48□□□□□ -0.57
CDC42BPB-207ENST00000560492 ZNF638Q14966 1978 aaKnown RBP11.48□□□□□ -0.57
CDC42BPB-207ENST00000560492 F5P12259 2224 aa11.48□□□□□ -0.57
CDC42BPB-207ENST00000560492 EPG5Q9HCE0 2579 aa11.48□□□□□ -0.57
CDC42BPB-207ENST00000560492 ACACBO00763 2458 aa11.47□□□□□ -0.57
CDC42BPB-207ENST00000560492 SLC30A4O14863 429 aa11.47□□□□□ -0.57
CDC42BPB-207ENST00000560492 ABLIM3O94929 683 aa11.47□□□□□ -0.57
CDC42BPB-207ENST00000560492 FDPSP14324 419 aaKnown RBP11.47□□□□□ -0.57
CDC42BPB-207ENST00000560492 TGM1P22735 817 aa11.47□□□□□ -0.57
CDC42BPB-207ENST00000560492 SOX9P48436 509 aa11.47□□□□□ -0.57
CDC42BPB-207ENST00000560492 DMP1Q13316 513 aaPredicted RBP11.47□□□□□ -0.57
CDC42BPB-207ENST00000560492 CD300LGQ6UXG3 332 aa11.47□□□□□ -0.57
CDC42BPB-207ENST00000560492 C12orf50Q8NA57 414 aaPredicted RBP11.47□□□□□ -0.57
CDC42BPB-207ENST00000560492 LEMD2Q8NC56 503 aa11.47□□□□□ -0.57
CDC42BPB-207ENST00000560492 C18orf25Q96B23 403 aaPredicted RBP11.47□□□□□ -0.57
CDC42BPB-207ENST00000560492 TBC1D32Q96NH3 1257 aa11.47□□□□□ -0.57
CDC42BPB-207ENST00000560492 PGLYRP2Q96PD5 576 aa11.47□□□□□ -0.57
CDC42BPB-207ENST00000560492 TARS2Q9BW92 718 aaKnown RBP11.47□□□□□ -0.57
CDC42BPB-207ENST00000560492 KMT5AQ9NQR1 393 aa11.47□□□□□ -0.57
CDC42BPB-207ENST00000560492 ANKFY1Q9P2R3 1169 aa11.47□□□□□ -0.57
CDC42BPB-207ENST00000560492 TNFSF13BQ9Y275 285 aa11.47□□□□□ -0.57
CDC42BPB-207ENST00000560492 GREB1Q4ZG55 1949 aa11.47□□□□□ -0.57
CDC42BPB-207ENST00000560492 NUP210Q8TEM1 1887 aaPredicted RBP11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 MAP1BP46821 2468 aaKnown RBP11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 A0A1W2PRU2 124 aa11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 NRG2O14511 850 aaPredicted RBP11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 GDF9O60383 454 aa11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 JAK2O60674 1132 aa11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 LRP3O75074 770 aa11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 MICAL2O94851 1124 aa11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 LARGE1O95461 756 aa11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 DMWDQ09019 674 aa11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 STRN3Q13033 797 aa11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 CSRP2Q16527 193 aa11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 RNF19BQ6ZMZ0 732 aa11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 HAUS6Q7Z4H7 955 aa11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 USP37Q86T82 979 aa11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 LONP2Q86WA8 852 aa11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 MAP4K3Q8IVH8 894 aa11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 MFSD6LQ8IWD5 586 aa11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 SPEM1Q8N4L4 309 aa11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 DDX12PQ92771 950 aa11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 GTF3C6Q969F1 213 aa11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 E2F7Q96AV8 911 aa11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 ACO2Q99798 780 aaKnown RBP11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 GPR88Q9GZN0 384 aa11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 DDX19AQ9NUU7 478 aaKnown RBP11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 CEP72Q9P209 647 aa11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 AFF4Q9UHB7 1163 aaKnown RBP11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 KIAA1024Q9UPX6 916 aa11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 YIPF1Q9Y548 306 aa11.46□□□□□ -0.57
CDC42BPB-207ENST00000560492 ANK1P16157 1881 aa11.46□□□□□ -0.58
CDC42BPB-207ENST00000560492 SPAG17Q6Q759 2223 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 KMT2BQ9UMN6 2715 aaPredicted RBP11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 ATG2BQ96BY7 2078 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 TCHHQ07283 1943 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 SHISA7A6NL88 538 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 AXIN1O15169 862 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 HRO43593 1189 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 OR4Q2P0C623 313 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 CHRNB1P11230 501 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 TDGF1P13385 188 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 RPL9P32969 192 aaKnown RBP11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 ALDH1A3P47895 512 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 NPTX2P47972 431 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 EPHB3P54753 998 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 YWHAHQ04917 246 aaPredicted RBP11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 PTGDRQ13258 359 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 PLD1Q13393 1074 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 PON2Q15165 354 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 ZRSR1Q15695 479 aaKnown RBP11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 CCDC6Q16204 474 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 ME3Q16798 604 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 SEZ6Q53EL9 994 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 C1orf228Q6PIY5 440 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 MPZL3Q6UWV2 235 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 DSTYKQ6XUX3 929 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 Q6ZS52 159 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 NSUN7Q8NE18 718 aaKnown RBP11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 SHKBP1Q8TBC3 707 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 SNX29Q8TEQ0 813 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 DDX1Q92499 740 aaKnown RBP11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 MSANTD3Q96H12 275 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 SUSD3Q96L08 255 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 ZMAT2Q96NC0 199 aaKnown RBP11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 C8orf33Q9H7E9 229 aaPredicted RBP11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 TRPV5Q9NQA5 729 aa11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 DAXXQ9UER7 740 aaPredicted RBP11.45□□□□□ -0.58
CDC42BPB-207ENST00000560492 LRWD1Q9UFC0 647 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms