RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 MMP19Q99542 508 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 EPAS1Q99814 870 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 TMEM109Q9BVC6 243 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 SPON1Q9HCB6 807 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 ZDHHC18Q9NUE0 388 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 ANAPC7Q9UJX3 599 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 CPSF3Q9UKF6 684 aaKnown RBP10.35□□□□□ -0.75
RTF1-206ENST00000560447 PCDHB4Q9Y5E5 795 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 NFS1Q9Y697 457 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 ZNF236Q9UL36 1845 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 RALGAPA2Q2PPJ7 1873 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 RBM47A0AV96 593 aaKnown RBP10.34□□□□□ -0.75
RTF1-206ENST00000560447 ERICH4A6NGS2 130 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 EIF3HO15372 352 aaKnown RBP eCLIP10.34□□□□□ -0.75
RTF1-206ENST00000560447 MAGEB2O15479 319 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 B4GALT4O60513 344 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 DDNO94850 711 aaPredicted RBP10.34□□□□□ -0.75
RTF1-206ENST00000560447 NR1D1P20393 614 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 GNA15P30679 374 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 CDH5P33151 784 aaPredicted RBP10.34□□□□□ -0.75
RTF1-206ENST00000560447 ACOT2P49753 483 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 IRAK1P51617 712 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 MRPS25P82663 173 aaKnown RBP10.34□□□□□ -0.75
RTF1-206ENST00000560447 TNFAIP2Q03169 654 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 LAMTOR4Q0VGL1 99 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 IRF5Q13568 498 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 MOGSQ13724 837 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 PLCB4Q15147 1175 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 SIX1Q15475 284 aaPredicted RBP10.34□□□□□ -0.75
RTF1-206ENST00000560447 UAP1Q16222 522 aaPredicted RBP10.34□□□□□ -0.75
RTF1-206ENST00000560447 LRRC38Q5VT99 294 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 CCDC137Q6PK04 289 aaKnown RBP10.34□□□□□ -0.75
RTF1-206ENST00000560447 MPZL3Q6UWV2 235 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 LRRC31Q6UY01 552 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 TRMT1LQ7Z2T5 733 aaKnown RBP10.34□□□□□ -0.75
RTF1-206ENST00000560447 RHOT1Q8IXI2 618 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 DHX37Q8IY37 1157 aaKnown RBP10.34□□□□□ -0.75
RTF1-206ENST00000560447 KATNAL2Q8IYT4 538 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 TTC39CQ8N584 583 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 RBBP8NLQ8NC74 664 aaPredicted RBP10.34□□□□□ -0.75
RTF1-206ENST00000560447 BBOF1Q8ND07 529 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 PRPF31Q8WWY3 499 aaKnown RBP10.34□□□□□ -0.75
RTF1-206ENST00000560447 GLG1Q92896 1179 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 ARL8AQ96BM9 186 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 CDCA5Q96FF9 252 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 FOXP3Q9BZS1 431 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 NIF3L1Q9GZT8 377 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 HAPLN2Q9GZV7 340 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 FZD8Q9H461 694 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 ELP3Q9H9T3 547 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 VTA1Q9NP79 307 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 PARVAQ9NVD7 372 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 PRMT7Q9NVM4 692 aaPredicted RBP10.34□□□□□ -0.75
RTF1-206ENST00000560447 WHRNQ9P202 907 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 RBPJLQ9UBG7 517 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 IP6K2Q9UHH9 426 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 ZHX1Q9UKY1 873 aaPredicted RBP10.34□□□□□ -0.75
RTF1-206ENST00000560447 PCDHGC3Q9UN70 934 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 FZD1Q9UP38 647 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 TNFSF13BQ9Y275 285 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 TELO2Q9Y4R8 837 aa10.34□□□□□ -0.75
RTF1-206ENST00000560447 MROH7Q68CQ1 1323 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 ATXN2Q99700 1313 aaKnown RBP10.33□□□□□ -0.76
RTF1-206ENST00000560447 TMEM110-MUSTN1A8MSY1 372 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 ADM5C9JUS6 153 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 ABLIM1O14639 778 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 ECEL1O95672 775 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 TNNC2P02585 160 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 PYGMP11217 842 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 EIF4BP23588 611 aaKnown RBP10.33□□□□□ -0.76
RTF1-206ENST00000560447 PTPN7P35236 360 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 GSCP56915 257 aaPredicted RBP10.33□□□□□ -0.76
RTF1-206ENST00000560447 COPS2P61201 443 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 LMNB2Q03252 620 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 DHX9Q08211 1270 aaKnown RBP10.33□□□□□ -0.76
RTF1-206ENST00000560447 SNAPC2Q13487 334 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 LAMC2Q13753 1193 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 PRKG1Q13976 671 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 CEP85LQ5SZL2 805 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 LDLRAD1Q5T700 205 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 NT5DC4Q86YG4 428 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 EXD1Q8NHP7 514 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 CCHCR1Q8TD31 782 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 EMID1Q96A84 441 aaPredicted RBP10.33□□□□□ -0.76
RTF1-206ENST00000560447 ANKRD36BP1Q96IX9 119 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 PAGR1Q9BTK6 254 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 PI4K2AQ9BTU6 479 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 CELF4Q9BZC1 486 aaKnown RBP10.33□□□□□ -0.76
RTF1-206ENST00000560447 STMN4Q9H169 189 aaPredicted RBP10.33□□□□□ -0.76
RTF1-206ENST00000560447 NEUROG2Q9H2A3 272 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 PABPC3Q9H361 631 aaKnown RBP10.33□□□□□ -0.76
RTF1-206ENST00000560447 CNOT10Q9H9A5 744 aaKnown RBP10.33□□□□□ -0.76
RTF1-206ENST00000560447 APOBEC3GQ9HC16 384 aaKnown RBP10.33□□□□□ -0.76
RTF1-206ENST00000560447 PTPRHQ9HD43 1115 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 ERVK-5Q9HDB9 667 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 ERAP1Q9NZ08 941 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 ADAM22Q9P0K1 906 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 RNF181Q9P0P0 153 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 ANKFY1Q9P2R3 1169 aa10.33□□□□□ -0.76
RTF1-206ENST00000560447 CEP83Q9Y592 693 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms