RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 AFF4Q9UHB7 1163 aaKnown RBP6.86□□□□□ -1.31
MARK3-220ENST00000560417 DMTF1Q9Y222 760 aa6.86□□□□□ -1.31
MARK3-220ENST00000560417 SNX13Q9Y5W8 968 aa6.86□□□□□ -1.31
MARK3-220ENST00000560417 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.86□□□□□ -1.31
MARK3-220ENST00000560417 LOC102724159A0A0B4J2E5 919 aa6.85□□□□□ -1.31
MARK3-220ENST00000560417 ABHD14A-ACY1A0A1B0GW23 586 aa6.85□□□□□ -1.31
MARK3-220ENST00000560417 TRIM43BA6NCK2 446 aa6.85□□□□□ -1.31
MARK3-220ENST00000560417 IFRD1O00458 451 aaPredicted RBP6.85□□□□□ -1.31
MARK3-220ENST00000560417 BTN3A1O00481 513 aa6.85□□□□□ -1.31
MARK3-220ENST00000560417 AGFG2O95081 481 aa6.85□□□□□ -1.31
MARK3-220ENST00000560417 PRSS23O95084 383 aa6.85□□□□□ -1.31
MARK3-220ENST00000560417 IL18RAPO95256 599 aa6.85□□□□□ -1.31
MARK3-220ENST00000560417 THP07101 528 aa6.85□□□□□ -1.31
MARK3-220ENST00000560417 MGAT1P26572 445 aa6.85□□□□□ -1.31
MARK3-220ENST00000560417 HTRA4P83105 476 aaPredicted RBP6.85□□□□□ -1.31
MARK3-220ENST00000560417 PWP2Q15269 919 aaKnown RBP6.85□□□□□ -1.31
MARK3-220ENST00000560417 LIMS2Q7Z4I7 341 aa6.85□□□□□ -1.31
MARK3-220ENST00000560417 CIR1Q86X95 450 aaPredicted RBP6.85□□□□□ -1.31
MARK3-220ENST00000560417 MICU3Q86XE3 530 aa6.85□□□□□ -1.31
MARK3-220ENST00000560417 EXOC8Q8IYI6 725 aa6.85□□□□□ -1.31
MARK3-220ENST00000560417 TMIEQ8NEW7 156 aa6.85□□□□□ -1.31
MARK3-220ENST00000560417 DNERQ8NFT8 737 aa6.85□□□□□ -1.31
MARK3-220ENST00000560417 TRIM43Q96BQ3 446 aaPredicted RBP6.85□□□□□ -1.31
MARK3-220ENST00000560417 KLHL32Q96NJ5 620 aa6.85□□□□□ -1.31
MARK3-220ENST00000560417 RBM15Q96T37 977 aaKnown RBP eCLIP6.85□□□□□ -1.31
MARK3-220ENST00000560417 COLEC11Q9BWP8 271 aa6.85□□□□□ -1.31
MARK3-220ENST00000560417 MYH16Q9H6N6 1097 aa6.85□□□□□ -1.31
MARK3-220ENST00000560417 SPON1Q9HCB6 807 aa6.85□□□□□ -1.31
MARK3-220ENST00000560417 RGS17Q9UGC6 210 aaPredicted RBP6.85□□□□□ -1.31
MARK3-220ENST00000560417 SRRDQ9UH36 339 aa6.85□□□□□ -1.31
MARK3-220ENST00000560417 PADI4Q9UM07 663 aa6.85□□□□□ -1.31
MARK3-220ENST00000560417 AGAP1Q9UPQ3 857 aa6.85□□□□□ -1.31
MARK3-220ENST00000560417 ZNF785A8K8V0 405 aa6.84□□□□□ -1.31
MARK3-220ENST00000560417 E9PLN8 166 aa6.84□□□□□ -1.31
MARK3-220ENST00000560417 SETSIPP0DME0 302 aa6.84□□□□□ -1.31
MARK3-220ENST00000560417 GCSHP23434 173 aa6.84□□□□□ -1.31
MARK3-220ENST00000560417 TNFSF4P23510 183 aa6.84□□□□□ -1.31
MARK3-220ENST00000560417 KCNJ5P48544 419 aa6.84□□□□□ -1.31
MARK3-220ENST00000560417 PSMC1P62191 440 aaKnown RBP6.84□□□□□ -1.31
MARK3-220ENST00000560417 SLFN5Q08AF3 891 aa6.84□□□□□ -1.31
MARK3-220ENST00000560417 CTBP1Q13363 440 aa6.84□□□□□ -1.31
MARK3-220ENST00000560417 CRB2Q5IJ48 1285 aa6.84□□□□□ -1.31
MARK3-220ENST00000560417 C3orf38Q5JPI3 329 aa6.84□□□□□ -1.31
MARK3-220ENST00000560417 DGKKQ5KSL6 1271 aa6.84□□□□□ -1.31
MARK3-220ENST00000560417 UBXN11Q5T124 520 aa6.84□□□□□ -1.31
MARK3-220ENST00000560417 MAMDC4Q6UXC1 1216 aa6.84□□□□□ -1.31
MARK3-220ENST00000560417 ZNF783Q6ZMS7 281 aa6.84□□□□□ -1.31
MARK3-220ENST00000560417 ANKRD35Q8N283 1001 aa6.84□□□□□ -1.31
MARK3-220ENST00000560417 AOPEPQ8N6M6 819 aa6.84□□□□□ -1.31
MARK3-220ENST00000560417 DDX17Q92841 729 aaKnown RBP6.84□□□□□ -1.31
MARK3-220ENST00000560417 TEPSINQ96N21 525 aa6.84□□□□□ -1.31
MARK3-220ENST00000560417 VKORC1Q9BQB6 163 aa6.84□□□□□ -1.31
MARK3-220ENST00000560417 PNPLA8Q9NP80 782 aa6.84□□□□□ -1.31
MARK3-220ENST00000560417 PARD6AQ9NPB6 346 aa6.84□□□□□ -1.31
MARK3-220ENST00000560417 A0A087WWL8 130 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 KLRG2A4D1S0 409 aaPredicted RBP6.83□□□□□ -1.32
MARK3-220ENST00000560417 POM121BA6NF01 834 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 NCK2O43639 380 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 GNAI2P04899 355 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 ITGB1P05556 798 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 HK1P19367 917 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 STT3AP46977 705 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 CHN2P52757 468 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 PTTG1IPP53801 180 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 BTKQ06187 659 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 SLC13A2Q13183 592 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 KRT72Q14CN4 511 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 FAM209BQ5JX69 171 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 GORABQ5T7V8 394 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 MED25Q71SY5 747 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 PPP1R32Q7Z5V6 425 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 USP37Q86T82 979 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 MB21D1Q8N884 522 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 TBC1D15Q8TC07 691 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 Q8TCH9 128 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 NUP133Q8WUM0 1156 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 ATXN2LQ8WWM7 1075 aaKnown RBP6.83□□□□□ -1.32
MARK3-220ENST00000560417 BRI3BPQ8WY22 251 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 NEU1Q99519 415 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 TINAGL1Q9GZM7 467 aaPredicted RBP6.83□□□□□ -1.32
MARK3-220ENST00000560417 ZCCHC4Q9H5U6 513 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 SACM1LQ9NTJ5 587 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 POGKQ9P215 609 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 PLEKHM1Q9Y4G2 1056 aa6.83□□□□□ -1.32
MARK3-220ENST00000560417 TBC1D4O60343 1298 aa6.82□□□□□ -1.32
MARK3-220ENST00000560417 CHEK2O96017 543 aa6.82□□□□□ -1.32
MARK3-220ENST00000560417 CKBP12277 381 aa6.82□□□□□ -1.32
MARK3-220ENST00000560417 ZNF135P52742 658 aaPredicted RBP6.82□□□□□ -1.32
MARK3-220ENST00000560417 RPS16P62249 146 aaKnown RBP6.82□□□□□ -1.32
MARK3-220ENST00000560417 NOMO2Q5JPE7 1267 aa6.82□□□□□ -1.32
MARK3-220ENST00000560417 FAM102AQ5T9C2 384 aaPredicted RBP6.82□□□□□ -1.32
MARK3-220ENST00000560417 IZUMO3Q5VZ72 239 aa6.82□□□□□ -1.32
MARK3-220ENST00000560417 GLB1LQ6UWU2 654 aa6.82□□□□□ -1.32
MARK3-220ENST00000560417 SPOCD1Q6ZMY3 1216 aa6.82□□□□□ -1.32
MARK3-220ENST00000560417 SKAP1Q86WV1 359 aa6.82□□□□□ -1.32
MARK3-220ENST00000560417 BRIP1Q9BX63 1249 aa6.82□□□□□ -1.32
MARK3-220ENST00000560417 ZNF518BQ9C0D4 1074 aa6.82□□□□□ -1.32
MARK3-220ENST00000560417 TRMT13Q9NUP7 481 aaKnown RBP6.82□□□□□ -1.32
MARK3-220ENST00000560417 PAXBP1Q9Y5B6 917 aa6.82□□□□□ -1.32
MARK3-220ENST00000560417 A0A1W2PPC4 97 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms