RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 RGS9BPQ6ZS82 235 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 ZNF804AQ7Z570 1209 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 IFNL3Q8IZI9 196 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 SYT2Q8N9I0 419 aaPredicted RBP20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 NSUN4Q96CB9 384 aaKnown RBP20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 TPK1Q9H3S4 243 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 MAGEF1Q9HAY2 307 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 CD209Q9NNX6 404 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 SYNPO2Q9UMS6 1093 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 PTPN22Q9Y2R2 807 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 PCDHA3Q9Y5H8 950 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 GPC6Q9Y625 555 aaPredicted RBP20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 DOCK2Q92608 1830 aa20.21■□□□□ 0.83
SEMA4B-215ENST00000560089 A0A0A6YYK5 440 aaPredicted RBP20.21■□□□□ 0.83
SEMA4B-215ENST00000560089 PLEKHA8P1O95397 391 aa20.21■□□□□ 0.83
SEMA4B-215ENST00000560089 CETPP11597 493 aa20.21■□□□□ 0.83
SEMA4B-215ENST00000560089 MASTLQ96GX5 879 aa20.21■□□□□ 0.83
SEMA4B-215ENST00000560089 CGREF1Q99674 301 aa20.21■□□□□ 0.83
SEMA4B-215ENST00000560089 ACTL7BQ9Y614 415 aa20.21■□□□□ 0.83
SEMA4B-215ENST00000560089 CYP2D7A0A087X1C5 515 aa20.21■□□□□ 0.83
SEMA4B-215ENST00000560089 MAGEB6P1A0A0J9YX57 407 aa20.21■□□□□ 0.83
SEMA4B-215ENST00000560089 H0YIN7 160 aa20.21■□□□□ 0.83
SEMA4B-215ENST00000560089 ATP2B4P23634 1241 aa20.21■□□□□ 0.83
SEMA4B-215ENST00000560089 CYP4A11Q02928 519 aa20.21■□□□□ 0.83
SEMA4B-215ENST00000560089 LRRC63Q05C16 580 aa20.21■□□□□ 0.83
SEMA4B-215ENST00000560089 CCDC137Q6PK04 289 aaKnown RBP20.21■□□□□ 0.83
SEMA4B-215ENST00000560089 NET1Q7Z628 596 aaPredicted RBP20.21■□□□□ 0.83
SEMA4B-215ENST00000560089 SRBD1Q8N5C6 995 aaKnown RBP20.21■□□□□ 0.83
SEMA4B-215ENST00000560089 NRDE2Q9H7Z3 1164 aa20.21■□□□□ 0.83
SEMA4B-215ENST00000560089 PLGRKTQ9HBL7 147 aa20.21■□□□□ 0.83
SEMA4B-215ENST00000560089 CYLDQ9NQC7 956 aa20.21■□□□□ 0.83
SEMA4B-215ENST00000560089 HEY2Q9UBP5 337 aa20.21■□□□□ 0.83
SEMA4B-215ENST00000560089 LGALS13Q9UHV8 139 aa20.21■□□□□ 0.83
SEMA4B-215ENST00000560089 CDH16O75309 829 aa20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 AQP4P55087 323 aa20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 NPEPPSP55786 919 aa20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 ANKRD20A4Q4UJ75 823 aa20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 PLEKHG4Q58EX7 1191 aa20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 TTC27Q6P3X3 843 aa20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 COX4I2Q96KJ9 171 aa20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 MXD3Q9BW11 206 aa20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 PCYOX1Q9UHG3 505 aa20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 TIMM22Q9Y584 194 aa20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 AP1G1O43747 822 aa20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 ZBTB16Q05516 673 aa20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 MSLNQ13421 630 aaPredicted RBP20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 CLUL1Q15846 466 aa20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 TRMT5Q32P41 509 aaKnown RBP20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 SYCP2LQ5T4T6 812 aa20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 IRF2BP2Q7Z5L9 587 aa20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 SP8Q8IXZ3 490 aa20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 TSG101Q99816 390 aa20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 KLHL4Q9C0H6 718 aa20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 NDEL1Q9GZM8 345 aa20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 OSGEPQ9NPF4 335 aa20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 ATF5Q9Y2D1 282 aaPredicted RBP20.2■□□□□ 0.82
SEMA4B-215ENST00000560089 TTC4O95801 387 aa20.19■□□□□ 0.82
SEMA4B-215ENST00000560089 TRPC1P48995 793 aa20.19■□□□□ 0.82
SEMA4B-215ENST00000560089 BTKQ06187 659 aa20.19■□□□□ 0.82
SEMA4B-215ENST00000560089 C16orf72Q14CZ0 275 aa20.19■□□□□ 0.82
SEMA4B-215ENST00000560089 TMED2Q15363 201 aa20.19■□□□□ 0.82
SEMA4B-215ENST00000560089 DPP8Q6V1X1 898 aaPredicted RBP20.19■□□□□ 0.82
SEMA4B-215ENST00000560089 PRELID2Q8N945 189 aa20.19■□□□□ 0.82
SEMA4B-215ENST00000560089 ZNF398Q8TD17 642 aa20.19■□□□□ 0.82
SEMA4B-215ENST00000560089 PANX3Q96QZ0 392 aa20.19■□□□□ 0.82
SEMA4B-215ENST00000560089 FUOMA2VDF0 154 aa20.19■□□□□ 0.82
SEMA4B-215ENST00000560089 THAP12O43422 761 aa20.19■□□□□ 0.82
SEMA4B-215ENST00000560089 ZBED1O96006 694 aa20.19■□□□□ 0.82
SEMA4B-215ENST00000560089 ATP6V1B1P15313 513 aa20.19■□□□□ 0.82
SEMA4B-215ENST00000560089 AMPD3Q01432 767 aa20.19■□□□□ 0.82
SEMA4B-215ENST00000560089 FUT2Q10981 343 aa20.19■□□□□ 0.82
SEMA4B-215ENST00000560089 MAP3K21Q5TCX8 1036 aa20.19■□□□□ 0.82
SEMA4B-215ENST00000560089 AADACL2Q6P093 401 aa20.19■□□□□ 0.82
SEMA4B-215ENST00000560089 CYFIP1Q7L576 1253 aa20.19■□□□□ 0.82
SEMA4B-215ENST00000560089 CCDC105Q8IYK2 499 aa20.19■□□□□ 0.82
SEMA4B-215ENST00000560089 GRID1Q9ULK0 1009 aa20.19■□□□□ 0.82
SEMA4B-215ENST00000560089 COQ6Q9Y2Z9 468 aa20.19■□□□□ 0.82
SEMA4B-215ENST00000560089 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.19■□□□□ 0.82
SEMA4B-215ENST00000560089 COL4A3BPQ9Y5P4 624 aa20.19■□□□□ 0.82
SEMA4B-215ENST00000560089 MINDY4BA8MYZ0 360 aa20.18■□□□□ 0.82
SEMA4B-215ENST00000560089 SPECC1L-ADORA2AF8WAN1 911 aa20.18■□□□□ 0.82
SEMA4B-215ENST00000560089 RARBP10826 455 aa20.18■□□□□ 0.82
SEMA4B-215ENST00000560089 CTTNQ14247 550 aaKnown RBP20.18■□□□□ 0.82
SEMA4B-215ENST00000560089 PPP2R5BQ15173 497 aa20.18■□□□□ 0.82
SEMA4B-215ENST00000560089 ISLR2Q6UXK2 745 aa20.18■□□□□ 0.82
SEMA4B-215ENST00000560089 CABP7Q86V35 215 aa20.18■□□□□ 0.82
SEMA4B-215ENST00000560089 CCDC110Q8TBZ0 833 aa20.18■□□□□ 0.82
SEMA4B-215ENST00000560089 ZFRQ96KR1 1074 aaKnown RBP20.18■□□□□ 0.82
SEMA4B-215ENST00000560089 KANSL2Q9H9L4 492 aa20.18■□□□□ 0.82
SEMA4B-215ENST00000560089 AAASQ9NRG9 546 aa20.18■□□□□ 0.82
SEMA4B-215ENST00000560089 ATAD3AQ9NVI7 634 aa20.18■□□□□ 0.82
SEMA4B-215ENST00000560089 THEGQ9P2T0 379 aa20.18■□□□□ 0.82
SEMA4B-215ENST00000560089 LZTS1Q9Y250 596 aa20.18■□□□□ 0.82
SEMA4B-215ENST00000560089 RGPD3A6NKT7 1758 aaPredicted RBP20.18■□□□□ 0.82
SEMA4B-215ENST00000560089 RGPD4Q7Z3J3 1758 aa20.18■□□□□ 0.82
SEMA4B-215ENST00000560089 A0A0G2JND7 137 aa20.18■□□□□ 0.82
SEMA4B-215ENST00000560089 DYTNA2CJ06 578 aa20.18■□□□□ 0.82
SEMA4B-215ENST00000560089 MAGEC1O60732 1142 aa20.18■□□□□ 0.82
SEMA4B-215ENST00000560089 STIP1P31948 543 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms