RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 BTBD8Q5XKL5 378 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 TRIM72Q6ZMU5 477 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 SV2AQ7L0J3 742 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 TRAPPC11Q7Z392 1133 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 CD302Q8IX05 232 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 GLIS3Q8NEA6 775 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 C18orf8Q96DM3 657 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 PNKPQ96T60 521 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 MMTAG2Q9BU76 263 aaKnown RBP11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 SIK2Q9H0K1 926 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 VIPAS39Q9H9C1 493 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 SEPT4O43236 478 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 HOXA2O43364 376 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 PNPLA4P41247 253 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 FAM133BQ5BKY9 247 aaKnown RBP11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 SLAIN1Q8ND83 568 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 TAS1R2Q8TE23 839 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 CPA5Q8WXQ8 436 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 PTPN22Q9Y2R2 807 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 MAFO75444 373 aaPredicted RBP11.27□□□□□ -0.6
CARMIL3-202ENST00000559694 ZRANB2O95218 330 aaKnown RBP eCLIP11.27□□□□□ -0.6
CARMIL3-202ENST00000559694 INHAP05111 366 aa11.27□□□□□ -0.6
CARMIL3-202ENST00000559694 KCNA2P16389 499 aa11.27□□□□□ -0.6
CARMIL3-202ENST00000559694 FSTL1Q12841 308 aa11.27□□□□□ -0.6
CARMIL3-202ENST00000559694 NME3Q13232 169 aa11.27□□□□□ -0.6
CARMIL3-202ENST00000559694 KCNA10Q16322 511 aa11.27□□□□□ -0.6
CARMIL3-202ENST00000559694 SLC35G1Q2M3R5 365 aa11.27□□□□□ -0.6
CARMIL3-202ENST00000559694 ZPBP2Q6X784 338 aa11.27□□□□□ -0.6
CARMIL3-202ENST00000559694 KIAA0319LQ8IZA0 1049 aa11.27□□□□□ -0.6
CARMIL3-202ENST00000559694 RNF14Q9UBS8 474 aa11.27□□□□□ -0.6
CARMIL3-202ENST00000559694 VAV3Q9UKW4 847 aa11.27□□□□□ -0.6
CARMIL3-202ENST00000559694 ATP8A1Q9Y2Q0 1164 aa11.27□□□□□ -0.6
CARMIL3-202ENST00000559694 PCDHB2Q9Y5E7 798 aa11.27□□□□□ -0.6
CARMIL3-202ENST00000559694 NR2E3Q9Y5X4 410 aa11.27□□□□□ -0.6
CARMIL3-202ENST00000559694 P4HA2O15460 535 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 SASH3O75995 380 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 ALDH2P05091 517 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 SMPD1P17405 629 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 IRAK1P51617 712 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 ORC1Q13415 861 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 PPP2R5EQ16537 467 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 KLHDC7AQ5VTJ3 777 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 WHAMMQ8TF30 809 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 KLHL29Q96CT2 875 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 NUP85Q9BW27 656 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 ESYT3A0FGR9 886 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 ANO9A1A5B4 782 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 TBKBP1A7MCY6 615 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 MAPTP10636 758 aaKnown RBP11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 MTHFD1LQ6UB35 978 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 LRRC31Q6UY01 552 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 TBC1D1Q86TI0 1168 aaPredicted RBP11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 DCP1BQ8IZD4 617 aaKnown RBP11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 BBS5Q8N3I7 341 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 C4orf32Q8N8J7 132 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 MCUR1Q96AQ8 359 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 GAD1Q99259 594 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 KLC4Q9NSK0 619 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 ASNSD1Q9NWL6 643 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 LCMT1Q9UIC8 334 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 L1RE1Q9UN81 338 aa11.27□□□□□ -0.61
CARMIL3-202ENST00000559694 MYH3P11055 1940 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 SGK1O00141 431 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 MEFVO15553 781 aaPredicted RBP11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 MMP3P08254 477 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 MYL6P60660 151 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 CYP24A1Q07973 514 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 DHX9Q08211 1270 aaKnown RBP11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 UBA3Q8TBC4 463 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 ZNF564Q8TBZ8 553 aaPredicted RBP11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 ZNF512Q96ME7 567 aaPredicted RBP11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 CELF4Q9BZC1 486 aaKnown RBP11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 KIF9Q9HAQ2 790 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 ABI2Q9NYB9 513 aaPredicted RBP11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 SRRDQ9UH36 339 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 DIS3Q9Y2L1 958 aaKnown RBP11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 HES2Q9Y543 173 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 MYO9BQ13459 2157 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 ANKRD63C9JTQ0 380 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 MCF2P10911 925 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 CASP5P51878 434 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 BTG3Q14201 252 aaPredicted RBP11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 ECM1Q16610 540 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 MUM1Q2TAK8 710 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 SUFUQ9UMX1 484 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 PLAAQ9Y263 795 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 IGLV3-22A0A075B6J6 115 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 CYB561D2O14569 222 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 ADAMTS3O15072 1205 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 PALMO75781 387 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 GTF2H1P32780 548 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 BCAR1P56945 870 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 RWDD2BP57060 319 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 GUCY1A3Q02108 690 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 TRIM65Q6PJ69 517 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 TMC7Q7Z402 723 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 SH2D3CQ8N5H7 860 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 MSL3Q8N5Y2 521 aaKnown RBP11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 HEMGNQ9BXL5 484 aa11.26□□□□□ -0.61
CARMIL3-202ENST00000559694 TIMM13Q9Y5L4 95 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms