RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 CLSTN1O94985 981 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 ADRB2P07550 413 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 KRT19P08727 400 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 TMEM191BP0C7N4 346 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 SLFN14P0C7P3 912 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 FSHRP23945 695 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 CMA1P23946 247 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 TAF6P49848 677 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 CYP2J2P51589 502 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 NTHL1P78549 312 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 SV2CQ496J9 727 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 OVOS1Q6IE37 1185 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 SLC8B1Q6J4K2 584 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 TRIM67Q6ZTA4 783 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 HS2ST1Q7LGA3 356 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 METTL23Q86XA0 190 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 ZDHHC14Q8IZN3 488 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 FSIP1Q8NA03 581 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 ZSWIM2Q8NEG5 633 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 ZNF461Q8TAF7 563 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 CACTINQ8WUQ7 758 aaKnown RBP8.86□□□□□ -0.99
SNX1-207ENST00000559401 CCDC47Q96A33 483 aaKnown RBP8.86□□□□□ -0.99
SNX1-207ENST00000559401 SENP8Q96LD8 212 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 ZNF560Q96MR9 790 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 HSPBP1Q9NZL4 362 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 USP25Q9UHP3 1055 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 RAPGEFL1Q9UHV5 662 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 HCN4Q9Y3Q4 1203 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 SCN1AP35498 2009 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 PVALEFA0A1B0GWK0 134 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 TMEM221A6NGB7 291 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 ZNF233A6NK53 670 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 M0QZQ0 153 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 M0R296 226 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 CYB561D2O14569 222 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 KIAA0391O15091 583 aaKnown RBP8.85□□□□□ -0.99
SNX1-207ENST00000559401 CLIC2O15247 247 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 ACTN4O43707 911 aaKnown RBP8.85□□□□□ -0.99
SNX1-207ENST00000559401 TNNC2P02585 160 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 ITGB3P05106 788 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 OR4Q2P0C623 313 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 POLR2BP30876 1174 aaKnown RBP8.85□□□□□ -0.99
SNX1-207ENST00000559401 HOXA9P31269 272 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 NDUFA8P51970 172 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 LILRA4P59901 499 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 NUCB2P80303 420 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 POU5F1Q01860 360 aaKnown RBP8.85□□□□□ -0.99
SNX1-207ENST00000559401 ADCY1Q08828 1119 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 SIGLEC14Q08ET2 396 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 BFSP1Q12934 665 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 MRPL58Q14197 206 aaKnown RBP8.85□□□□□ -0.99
SNX1-207ENST00000559401 UVSSAQ2YD98 709 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 PABPC1LQ4VXU2 614 aaKnown RBP8.85□□□□□ -0.99
SNX1-207ENST00000559401 LMBRD2Q68DH5 695 aaPredicted RBP8.85□□□□□ -0.99
SNX1-207ENST00000559401 CNNM4Q6P4Q7 775 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 NT5DC4Q86YG4 428 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 SUGP1Q8IWZ8 645 aaKnown RBP8.85□□□□□ -0.99
SNX1-207ENST00000559401 ELMOD1Q8N336 334 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 RDH13Q8NBN7 331 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 ZNF507Q8TCN5 953 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 PAGE5Q96GU1 130 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 ANKRD36BP1Q96IX9 119 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 FAM84AQ96KN4 292 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 PGLYRP2Q96PD5 576 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 MYADMQ96S97 322 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 RHOBTB2Q9BYZ6 727 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 SMOC2Q9H3U7 446 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 PDE11AQ9HCR9 933 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 HCFC1R1Q9NWW0 138 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 AFF4Q9UHB7 1163 aaKnown RBP8.85□□□□□ -0.99
SNX1-207ENST00000559401 AGAP1Q9UPQ3 857 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 MYO10Q9HD67 2058 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 DOCK6Q96HP0 2047 aa8.85□□□□□ -0.99
SNX1-207ENST00000559401 ANO9A1A5B4 782 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 OR6C75A6NL08 312 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 PIRO00625 290 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 SPTLC1O15269 473 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 TBC1D4O60343 1298 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 N4BP1O75113 896 aaKnown RBP8.84□□□□□ -0.99
SNX1-207ENST00000559401 ABLIM3O94929 683 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 SEC24AO95486 1093 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 ATF2P15336 505 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 TYMPP19971 482 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 PAX3P23760 479 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 PNPLA4P41247 253 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 AARSP49588 968 aaKnown RBP eCLIP8.84□□□□□ -0.99
SNX1-207ENST00000559401 WNT7BP56706 349 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 SURF1Q15526 300 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 KMT5BQ4FZB7 885 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 TPGS2Q68CL5 300 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 RNF19BQ6ZMZ0 732 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 HFE2Q6ZVN8 426 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 EPM2AIP1Q7L775 607 aaPredicted RBP8.84□□□□□ -0.99
SNX1-207ENST00000559401 CBWD2Q8IUF1 395 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 TCEAL8Q8IYN2 117 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 UBALD2Q8IYN6 164 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 THEM5Q8N1Q8 247 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 CSGALNACT2Q8N6G5 542 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 XXYLT1Q8NBI6 393 aa8.84□□□□□ -0.99
SNX1-207ENST00000559401 ST13P5Q8NFI4 369 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms