RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 IGSF22Q8N9C0 903 aa17.75■□□□□ 0.43
CDC42BPB-205ENST00000559245 DRC1Q96MC2 740 aa17.75■□□□□ 0.43
CDC42BPB-205ENST00000559245 SLITRK6Q9H5Y7 841 aa17.75■□□□□ 0.43
CDC42BPB-205ENST00000559245 PCDHB8Q9UN66 801 aa17.75■□□□□ 0.43
CDC42BPB-205ENST00000559245 DNM3Q9UQ16 869 aa17.75■□□□□ 0.43
CDC42BPB-205ENST00000559245 STK24Q9Y6E0 443 aa17.75■□□□□ 0.43
CDC42BPB-205ENST00000559245 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.75■□□□□ 0.43
CDC42BPB-205ENST00000559245 CNOT1A5YKK6 2376 aaKnown RBP17.75■□□□□ 0.43
CDC42BPB-205ENST00000559245 ATG2BQ96BY7 2078 aa17.75■□□□□ 0.43
CDC42BPB-205ENST00000559245 ARNTLO00327 626 aa17.74■□□□□ 0.43
CDC42BPB-205ENST00000559245 RETP07949 1114 aa17.74■□□□□ 0.43
CDC42BPB-205ENST00000559245 MARCKSP29966 332 aaPredicted RBP17.74■□□□□ 0.43
CDC42BPB-205ENST00000559245 TRAPPC10P48553 1259 aa17.74■□□□□ 0.43
CDC42BPB-205ENST00000559245 MLLT6P55198 1093 aaPredicted RBP17.74■□□□□ 0.43
CDC42BPB-205ENST00000559245 MAPK7Q13164 816 aa17.74■□□□□ 0.43
CDC42BPB-205ENST00000559245 GNL2Q13823 731 aaKnown RBP17.74■□□□□ 0.43
CDC42BPB-205ENST00000559245 GAS6Q14393 721 aa17.74■□□□□ 0.43
CDC42BPB-205ENST00000559245 SLC10A6Q3KNW5 377 aa17.74■□□□□ 0.43
CDC42BPB-205ENST00000559245 SEZ6Q53EL9 994 aa17.74■□□□□ 0.43
CDC42BPB-205ENST00000559245 SHKBP1Q8TBC3 707 aa17.74■□□□□ 0.43
CDC42BPB-205ENST00000559245 CSGALNACT1Q8TDX6 532 aa17.74■□□□□ 0.43
CDC42BPB-205ENST00000559245 E2F7Q96AV8 911 aa17.74■□□□□ 0.43
CDC42BPB-205ENST00000559245 RUSC1Q9BVN2 902 aa17.74■□□□□ 0.43
CDC42BPB-205ENST00000559245 GPR88Q9GZN0 384 aa17.74■□□□□ 0.43
CDC42BPB-205ENST00000559245 TUBGCP4Q9UGJ1 667 aa17.74■□□□□ 0.43
CDC42BPB-205ENST00000559245 YIPF1Q9Y548 306 aa17.74■□□□□ 0.43
CDC42BPB-205ENST00000559245 TCHHQ07283 1943 aa17.74■□□□□ 0.43
CDC42BPB-205ENST00000559245 SFI1A8K8P3 1242 aa17.73■□□□□ 0.43
CDC42BPB-205ENST00000559245 SLC16A4O15374 487 aa17.73■□□□□ 0.43
CDC42BPB-205ENST00000559245 LRP3O75074 770 aa17.73■□□□□ 0.43
CDC42BPB-205ENST00000559245 PTGDRQ13258 359 aa17.73■□□□□ 0.43
CDC42BPB-205ENST00000559245 SIM2Q14190 667 aaPredicted RBP17.73■□□□□ 0.43
CDC42BPB-205ENST00000559245 NOLC1Q14978 699 aaKnown RBP eCLIP17.73■□□□□ 0.43
CDC42BPB-205ENST00000559245 RINT1Q6NUQ1 792 aa17.73■□□□□ 0.43
CDC42BPB-205ENST00000559245 C1orf186Q6ZWK4 172 aa17.73■□□□□ 0.43
CDC42BPB-205ENST00000559245 CCDC83Q8IWF9 413 aa17.73■□□□□ 0.43
CDC42BPB-205ENST00000559245 YAF2Q8IY57 180 aa17.73■□□□□ 0.43
CDC42BPB-205ENST00000559245 SPEM1Q8N4L4 309 aa17.73■□□□□ 0.43
CDC42BPB-205ENST00000559245 BEST2Q8NFU1 509 aa17.73■□□□□ 0.43
CDC42BPB-205ENST00000559245 FBXO18Q8NFZ0 1043 aa17.73■□□□□ 0.43
CDC42BPB-205ENST00000559245 NETO1Q8TDF5 533 aa17.73■□□□□ 0.43
CDC42BPB-205ENST00000559245 RSPRY1Q96DX4 576 aa17.73■□□□□ 0.43
CDC42BPB-205ENST00000559245 RAB34Q9BZG1 259 aa17.73■□□□□ 0.43
CDC42BPB-205ENST00000559245 C17orf75Q9HAS0 396 aa17.73■□□□□ 0.43
CDC42BPB-205ENST00000559245 ANKFY1Q9P2R3 1169 aa17.73■□□□□ 0.43
CDC42BPB-205ENST00000559245 NOL7Q9UMY1 257 aaKnown RBP17.73■□□□□ 0.43
CDC42BPB-205ENST00000559245 TSC2P49815 1807 aa17.72■□□□□ 0.43
CDC42BPB-205ENST00000559245 A0A1W2PRU2 124 aa17.72■□□□□ 0.43
CDC42BPB-205ENST00000559245 PP2D1A8MPX8 630 aa17.72■□□□□ 0.43
CDC42BPB-205ENST00000559245 CHURC1-FNTBB4DL54 471 aa17.72■□□□□ 0.43
CDC42BPB-205ENST00000559245 M0QZQ0 153 aa17.72■□□□□ 0.43
CDC42BPB-205ENST00000559245 CHADO15335 359 aa17.72■□□□□ 0.43
CDC42BPB-205ENST00000559245 TOM1L1O75674 476 aa17.72■□□□□ 0.43
CDC42BPB-205ENST00000559245 VNN2O95498 520 aa17.72■□□□□ 0.43
CDC42BPB-205ENST00000559245 CENPBP07199 599 aaPredicted RBP17.72■□□□□ 0.43
CDC42BPB-205ENST00000559245 ADRB1P08588 477 aa17.72■□□□□ 0.43
CDC42BPB-205ENST00000559245 FNTBP49356 437 aa17.72■□□□□ 0.43
CDC42BPB-205ENST00000559245 YWHAHQ04917 246 aaPredicted RBP17.72■□□□□ 0.43
CDC42BPB-205ENST00000559245 DMWDQ09019 674 aa17.72■□□□□ 0.43
CDC42BPB-205ENST00000559245 STRN3Q13033 797 aa17.72■□□□□ 0.43
CDC42BPB-205ENST00000559245 LRRC32Q14392 662 aa17.72■□□□□ 0.43
CDC42BPB-205ENST00000559245 TMC8Q8IU68 726 aa17.72■□□□□ 0.43
CDC42BPB-205ENST00000559245 TMEM130Q8N3G9 435 aa17.72■□□□□ 0.43
CDC42BPB-205ENST00000559245 MSANTD3Q96H12 275 aa17.72■□□□□ 0.43
CDC42BPB-205ENST00000559245 PGLYRP2Q96PD5 576 aa17.72■□□□□ 0.43
CDC42BPB-205ENST00000559245 LRRC3Q9BY71 257 aa17.72■□□□□ 0.43
CDC42BPB-205ENST00000559245 RBM12Q9NTZ6 932 aaKnown RBP17.72■□□□□ 0.43
CDC42BPB-205ENST00000559245 TIMM13Q9Y5L4 95 aaPredicted RBP17.72■□□□□ 0.43
CDC42BPB-205ENST00000559245 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.71■□□□□ 0.43
CDC42BPB-205ENST00000559245 SLC38A8A6NNN8 435 aa17.71■□□□□ 0.43
CDC42BPB-205ENST00000559245 SLC30A4O14863 429 aa17.71■□□□□ 0.43
CDC42BPB-205ENST00000559245 HRO43593 1189 aa17.71■□□□□ 0.43
CDC42BPB-205ENST00000559245 OAZ2O95190 189 aa17.71■□□□□ 0.43
CDC42BPB-205ENST00000559245 OR4Q2P0C623 313 aa17.71■□□□□ 0.43
CDC42BPB-205ENST00000559245 SOX9P48436 509 aa17.71■□□□□ 0.43
CDC42BPB-205ENST00000559245 KPNA1P52294 538 aaPredicted RBP17.71■□□□□ 0.43
CDC42BPB-205ENST00000559245 SPAG1Q07617 926 aa17.71■□□□□ 0.43
CDC42BPB-205ENST00000559245 FCHO2Q0JRZ9 810 aa17.71■□□□□ 0.43
CDC42BPB-205ENST00000559245 DUSP4Q13115 394 aa17.71■□□□□ 0.43
CDC42BPB-205ENST00000559245 PLD1Q13393 1074 aa17.71■□□□□ 0.43
CDC42BPB-205ENST00000559245 KRT79Q5XKE5 535 aa17.71■□□□□ 0.43
CDC42BPB-205ENST00000559245 C1orf228Q6PIY5 440 aa17.71■□□□□ 0.43
CDC42BPB-205ENST00000559245 KCNK18Q7Z418 384 aa17.71■□□□□ 0.43
CDC42BPB-205ENST00000559245 LLPHQ9BRT6 129 aaKnown RBP17.71■□□□□ 0.43
CDC42BPB-205ENST00000559245 NTPCRQ9BSD7 190 aaKnown RBP17.71■□□□□ 0.43
CDC42BPB-205ENST00000559245 OXCT2Q9BYC2 517 aaPredicted RBP17.71■□□□□ 0.43
CDC42BPB-205ENST00000559245 DNAJC25Q9H1X3 360 aa17.71■□□□□ 0.43
CDC42BPB-205ENST00000559245 CRISPLD1Q9H336 500 aa17.71■□□□□ 0.43
CDC42BPB-205ENST00000559245 C8orf33Q9H7E9 229 aaPredicted RBP17.71■□□□□ 0.43
CDC42BPB-205ENST00000559245 SEMA4GQ9NTN9 838 aa17.71■□□□□ 0.43
CDC42BPB-205ENST00000559245 EML5Q05BV3 1969 aa17.71■□□□□ 0.43
CDC42BPB-205ENST00000559245 SCN1AP35498 2009 aa17.71■□□□□ 0.42
CDC42BPB-205ENST00000559245 K7ESF4 209 aa17.7■□□□□ 0.42
CDC42BPB-205ENST00000559245 CXCL8P10145 99 aa17.7■□□□□ 0.42
CDC42BPB-205ENST00000559245 CDC25AP30304 524 aa17.7■□□□□ 0.42
CDC42BPB-205ENST00000559245 LRPAP1P30533 357 aa17.7■□□□□ 0.42
CDC42BPB-205ENST00000559245 CNR2P34972 360 aa17.7■□□□□ 0.42
CDC42BPB-205ENST00000559245 EPHB3P54753 998 aa17.7■□□□□ 0.42
CDC42BPB-205ENST00000559245 SRSF5Q13243 272 aaKnown RBP17.7■□□□□ 0.42
CDC42BPB-205ENST00000559245 PPM1JQ5JR12 505 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms