RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 SLCO2A1Q92959 643 aa12.02□□□□□ -0.49
CLPX-204ENST00000559152 RPF1Q9H9Y2 349 aaKnown RBP12.02□□□□□ -0.49
CLPX-204ENST00000559152 EFCC1Q9HA90 598 aa12.02□□□□□ -0.49
CLPX-204ENST00000559152 IP6K2Q9UHH9 426 aa12.02□□□□□ -0.49
CLPX-204ENST00000559152 CEP83Q9Y592 693 aa12.02□□□□□ -0.49
CLPX-204ENST00000559152 IVNS1ABPQ9Y6Y0 642 aa12.02□□□□□ -0.49
CLPX-204ENST00000559152 PASKQ96RG2 1323 aa12.02□□□□□ -0.49
CLPX-204ENST00000559152 TTLL13PA6NNM8 815 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 PPFIA2O75334 1257 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 C22orf31O95567 290 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 TFAMQ00059 246 aaKnown RBP12.01□□□□□ -0.49
CLPX-204ENST00000559152 MBTD1Q05BQ5 628 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 DHX9Q08211 1270 aaKnown RBP12.01□□□□□ -0.49
CLPX-204ENST00000559152 MAMLD1Q13495 774 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 ZNF699Q32M78 642 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 TTMPQ5BVD1 217 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 CEP85LQ5SZL2 805 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 IFNLR1Q8IU57 520 aaPredicted RBP12.01□□□□□ -0.49
CLPX-204ENST00000559152 ARFGAP2Q8N6H7 521 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 TMEM35BQ8NCS4 154 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 UBLCP1Q8WVY7 318 aaPredicted RBP12.01□□□□□ -0.49
CLPX-204ENST00000559152 COPS5Q92905 334 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 C18orf8Q96DM3 657 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 FAM84AQ96KN4 292 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 ATP6V1G3Q96LB4 118 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 C11orf70Q9BRQ4 267 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 TRIM51Q9BSJ1 452 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 CAPS2Q9BXY5 557 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 NEUROG2Q9H2A3 272 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 PDGFCQ9NRA1 345 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 PDHXO00330 501 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 ECEL1O95672 775 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 LGALS2P05162 132 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 HOXC6P09630 235 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 RARAP10276 462 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 CYP2C8P10632 490 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 MCF2P10911 925 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 MMP8P22894 467 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 EIF4BP23588 611 aaKnown RBP12.01□□□□□ -0.49
CLPX-204ENST00000559152 GJA5P36382 358 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 MYL6P60660 151 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 TAPT1Q6NXT6 567 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 AADACL2Q6P093 401 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 CROCCP2Q86T23 111 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 THNSL1Q8IYQ7 743 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 FEZF2Q8TBJ5 459 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 GRK7Q8WTQ7 553 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 ARL8AQ96BM9 186 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 TMBIM4Q9HC24 238 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 CISHQ9NSE2 258 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 ZDHHC18Q9NUE0 388 aa12.01□□□□□ -0.49
CLPX-204ENST00000559152 TLR3O15455 904 aaKnown RBP12□□□□□ -0.49
CLPX-204ENST00000559152 MED7O43513 233 aa12□□□□□ -0.49
CLPX-204ENST00000559152 ZEB2O60315 1214 aa12□□□□□ -0.49
CLPX-204ENST00000559152 PPFIA4O75335 1185 aa12□□□□□ -0.49
CLPX-204ENST00000559152 INSRRP14616 1297 aa12□□□□□ -0.49
CLPX-204ENST00000559152 ADORA2AP29274 412 aa12□□□□□ -0.49
CLPX-204ENST00000559152 FKBP1BP68106 108 aa12□□□□□ -0.49
CLPX-204ENST00000559152 SGO2Q562F6 1265 aa12□□□□□ -0.49
CLPX-204ENST00000559152 KDM7AQ6ZMT4 941 aa12□□□□□ -0.49
CLPX-204ENST00000559152 ANKRD23Q86SG2 305 aa12□□□□□ -0.49
CLPX-204ENST00000559152 PASD1Q8IV76 773 aa12□□□□□ -0.49
CLPX-204ENST00000559152 TRIM31Q9BZY9 425 aa12□□□□□ -0.49
CLPX-204ENST00000559152 RNPEPQ9H4A4 650 aa12□□□□□ -0.49
CLPX-204ENST00000559152 MORF4L1Q9UBU8 362 aa12□□□□□ -0.49
CLPX-204ENST00000559152 PCDHGC3Q9UN70 934 aa12□□□□□ -0.49
CLPX-204ENST00000559152 CALCAP01258 141 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 CLCN3P51790 818 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 SLMAPQ14BN4 828 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 SIX1Q15475 284 aaPredicted RBP11.99□□□□□ -0.49
CLPX-204ENST00000559152 MAMDC4Q6UXC1 1216 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 MMS22LQ6ZRQ5 1243 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 KATNAL2Q8IYT4 538 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 TRAPPC12Q8WVT3 735 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 TSPYL1Q9H0U9 437 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 CDT1Q9H211 546 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 FAM124BQ9H5Z6 455 aaPredicted RBP11.99□□□□□ -0.49
CLPX-204ENST00000559152 ASB7Q9H672 318 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 STRIP2Q9ULQ0 834 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 SNX24Q9Y343 169 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 UMODL1Q5DID0 1318 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 H0YGN5 161 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 P4HA1P13674 534 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 POLR2BP30876 1174 aaKnown RBP11.99□□□□□ -0.49
CLPX-204ENST00000559152 ATICP31939 592 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 CDH5P33151 784 aaPredicted RBP11.99□□□□□ -0.49
CLPX-204ENST00000559152 PLTPP55058 493 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 HNRNPH2P55795 449 aaKnown RBP11.99□□□□□ -0.49
CLPX-204ENST00000559152 CALCOCO2Q13137 446 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 PPP1R7Q15435 360 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 UAP1Q16222 522 aaPredicted RBP11.99□□□□□ -0.49
CLPX-204ENST00000559152 AGBL2Q5U5Z8 902 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 TTC27Q6P3X3 843 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 EXD1Q8NHP7 514 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 DDX27Q96GQ7 796 aaKnown RBP11.99□□□□□ -0.49
CLPX-204ENST00000559152 TXLNGYQ9BZA5 131 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.99□□□□□ -0.49
CLPX-204ENST00000559152 NFS1Q9Y697 457 aa11.99□□□□□ -0.49
CLPX-204ENST00000559152 CCL15-CCL14A0A0B4J2E2 113 aa11.98□□□□□ -0.49
CLPX-204ENST00000559152 GAS8O95995 478 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms