RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 XPOTO43592 962 aaKnown RBP12.34□□□□□ -0.43
SNX1-204ENST00000559061 HCRTO43612 131 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 URODP06132 367 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 EPCAMP16422 314 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 CLCN4P51793 760 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 VAMP7P51809 220 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 FKBP3Q00688 224 aaKnown RBP12.34□□□□□ -0.43
SNX1-204ENST00000559061 TFF2Q03403 129 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 BFSP1Q12934 665 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 ZACNQ401N2 412 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 VARS2Q5ST30 1063 aaKnown RBP12.34□□□□□ -0.43
SNX1-204ENST00000559061 CCDC183Q5T5S1 534 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 LILRA6Q6PI73 481 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 TMEM184AQ6ZMB5 413 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 GPR65Q8IYL9 337 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 CSGALNACT2Q8N6G5 542 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 MICAL1Q8TDZ2 1067 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 PABPC5Q96DU9 382 aaKnown RBP12.34□□□□□ -0.43
SNX1-204ENST00000559061 MSLNLQ96KJ4 702 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 SENP8Q96LD8 212 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 TMEM209Q96SK2 561 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 FUCA2Q9BTY2 467 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 MKNK1Q9BUB5 465 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 GTPBP4Q9BZE4 634 aaKnown RBP12.34□□□□□ -0.43
SNX1-204ENST00000559061 IGFLR1Q9H665 355 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 TLE6Q9H808 572 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 MRPL17Q9NRX2 175 aaKnown RBP12.34□□□□□ -0.43
SNX1-204ENST00000559061 CDH22Q9UJ99 828 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 BARX2Q9UMQ3 279 aaPredicted RBP12.34□□□□□ -0.43
SNX1-204ENST00000559061 AGAP1Q9UPQ3 857 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 HCFC2Q9Y5Z7 792 aa12.34□□□□□ -0.43
SNX1-204ENST00000559061 DOCK6Q96HP0 2047 aa12.33□□□□□ -0.43
SNX1-204ENST00000559061 NOTCH4Q99466 2003 aa12.33□□□□□ -0.43
SNX1-204ENST00000559061 PTPRDP23468 1912 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 SYN3O14994 580 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 SLC16A3O15427 465 aaKnown RBP12.33□□□□□ -0.44
SNX1-204ENST00000559061 CYP11A1P05108 521 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 TMEM191BP0C7N4 346 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 PSMC2P35998 433 aaKnown RBP12.33□□□□□ -0.44
SNX1-204ENST00000559061 TAF6P49848 677 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 MYL6P60660 151 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 ENPEPQ07075 957 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 ELAVL2Q12926 359 aaKnown RBP12.33□□□□□ -0.44
SNX1-204ENST00000559061 SURF1Q15526 300 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 PSMD5Q16401 504 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 CCDC142Q17RM4 750 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 DUOXA2Q1HG44 320 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 KLHL40Q2TBA0 621 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 CBWD6Q4V339 395 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 CBWD3Q5JTY5 395 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 CBWD5Q5RIA9 395 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 CAVIN1Q6NZI2 390 aaKnown RBP12.33□□□□□ -0.44
SNX1-204ENST00000559061 SYCE2Q6PIF2 218 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 SV2AQ7L0J3 742 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 OSTM1Q86WC4 334 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 CEP57Q86XR8 500 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 LRRC52Q8N7C0 313 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 MLKLQ8NB16 471 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 OR10T2Q8NGX3 314 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 KBTBD7Q8WVZ9 684 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 SEMA4DQ92854 862 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 SLC35C1Q96A29 364 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 UBE2ZQ9H832 354 aaPredicted RBP12.33□□□□□ -0.44
SNX1-204ENST00000559061 FNIP2Q9P278 1114 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 RWDD2AQ9UIY3 292 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 L1RE1Q9UN81 338 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 FRMD4BQ9Y2L6 1034 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 NUB1Q9Y5A7 615 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.33□□□□□ -0.44
SNX1-204ENST00000559061 VCANP13611 3396 aa12.33□□□□□ -0.44
SNX1-204ENST00000559061 KPNA7A9QM74 516 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 CETN3O15182 167 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 OAZ2O95190 189 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 PAPLNO95428 1278 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 TNNI1P19237 187 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 TYMPP19971 482 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 RPL13P26373 211 aaKnown RBP12.32□□□□□ -0.44
SNX1-204ENST00000559061 PPP1R2P41236 205 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 GCLMP48507 274 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 MARSP56192 900 aaKnown RBP12.32□□□□□ -0.44
SNX1-204ENST00000559061 RBP5P82980 135 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 SOWAHAQ2M3V2 549 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 WSCD1Q658N2 575 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 SLC8B1Q6J4K2 584 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 LLGL2Q6P1M3 1020 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 INTS8Q75QN2 995 aaKnown RBP12.32□□□□□ -0.44
SNX1-204ENST00000559061 GLYCTKQ8IVS8 523 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 PDCL2Q8N4E4 241 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 TAS1R2Q8TE23 839 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 CACTINQ8WUQ7 758 aaKnown RBP12.32□□□□□ -0.44
SNX1-204ENST00000559061 ANKRD36BP1Q96IX9 119 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 CEP63Q96MT8 703 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 FNBP1Q96RU3 617 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 CDCA3Q99618 268 aaPredicted RBP12.32□□□□□ -0.44
SNX1-204ENST00000559061 PKMYT1Q99640 499 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 TSG101Q99816 390 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 SDCBP2Q9H190 292 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 HSD3B7Q9H2F3 369 aa12.32□□□□□ -0.44
SNX1-204ENST00000559061 APOBEC3GQ9HC16 384 aaKnown RBP12.32□□□□□ -0.44
SNX1-204ENST00000559061 GDAP2Q9NXN4 497 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms