RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 GAD1Q99259 594 aa17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 LBHD1Q9BQE6 289 aaPredicted RBP17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 RPF1Q9H9Y2 349 aaKnown RBP17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 CAPN6Q9Y6Q1 641 aa17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 MYH10P35580 1976 aa17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 SRGAP2O75044 1071 aa17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 EOMESO95936 686 aa17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 TRIM49P0CI25 452 aa17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 TRIM49CP0CI26 452 aa17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 EPB41P11171 864 aaKnown RBP17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 DMTNQ08495 405 aa17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 PSMD6Q15008 389 aa17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 XKR4Q5GH76 650 aa17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 C9orf50Q5SZB4 431 aa17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 LMBRD2Q68DH5 695 aaPredicted RBP17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 APBB1IPQ7Z5R6 666 aaPredicted RBP17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 EFCAB13Q8IY85 973 aa17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 MMS19Q96T76 1030 aa17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 CITO14578 2027 aa17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 ARL5CA6NH57 179 aa17.03■□□□□ 0.32
CDC42BPB-204ENST00000559043 LRRIQ3A6PVS8 624 aaPredicted RBP17.03■□□□□ 0.32
CDC42BPB-204ENST00000559043 PTGESO14684 152 aa17.03■□□□□ 0.32
CDC42BPB-204ENST00000559043 RHOXF2BP0C7M4 288 aa17.03■□□□□ 0.32
CDC42BPB-204ENST00000559043 MLH1P40692 756 aa17.03■□□□□ 0.32
CDC42BPB-204ENST00000559043 VAMP7P51809 220 aa17.03■□□□□ 0.32
CDC42BPB-204ENST00000559043 APBA1Q02410 837 aa17.03■□□□□ 0.32
CDC42BPB-204ENST00000559043 PPP3CAQ08209 521 aa17.03■□□□□ 0.32
CDC42BPB-204ENST00000559043 BFSP1Q12934 665 aa17.03■□□□□ 0.32
CDC42BPB-204ENST00000559043 TDRD12Q587J7 1177 aaKnown RBP17.03■□□□□ 0.32
CDC42BPB-204ENST00000559043 GLRA4Q5JXX5 417 aa17.03■□□□□ 0.32
CDC42BPB-204ENST00000559043 BEND6Q5SZJ8 279 aaPredicted RBP17.03■□□□□ 0.32
CDC42BPB-204ENST00000559043 WDR93Q6P2C0 686 aa17.03■□□□□ 0.32
CDC42BPB-204ENST00000559043 RNF10Q8N5U6 811 aaKnown RBP17.03■□□□□ 0.32
CDC42BPB-204ENST00000559043 SLC35C1Q96A29 364 aa17.03■□□□□ 0.32
CDC42BPB-204ENST00000559043 RHOXF2Q9BQY4 288 aa17.03■□□□□ 0.32
CDC42BPB-204ENST00000559043 TMEM161AQ9NX61 479 aa17.03■□□□□ 0.32
CDC42BPB-204ENST00000559043 SNX12Q9UMY4 172 aa17.03■□□□□ 0.32
CDC42BPB-204ENST00000559043 PTPRSQ13332 1948 aa17.03■□□□□ 0.32
CDC42BPB-204ENST00000559043 MAP2K7O14733 419 aa17.02■□□□□ 0.32
CDC42BPB-204ENST00000559043 UPP2O95045 317 aa17.02■□□□□ 0.32
CDC42BPB-204ENST00000559043 MOCS3O95396 460 aa17.02■□□□□ 0.32
CDC42BPB-204ENST00000559043 NFICP08651 508 aa17.02■□□□□ 0.32
CDC42BPB-204ENST00000559043 DLATP10515 647 aaKnown RBP17.02■□□□□ 0.32
CDC42BPB-204ENST00000559043 SKIP12755 728 aa17.02■□□□□ 0.32
CDC42BPB-204ENST00000559043 CLDN10P78369 228 aa17.02■□□□□ 0.32
CDC42BPB-204ENST00000559043 KYAT1Q16773 422 aa17.02■□□□□ 0.32
CDC42BPB-204ENST00000559043 JADE1Q6IE81 842 aa17.02■□□□□ 0.32
CDC42BPB-204ENST00000559043 OR5B17Q8NGF7 314 aa17.02■□□□□ 0.32
CDC42BPB-204ENST00000559043 TOP1MTQ969P6 601 aa17.02■□□□□ 0.32
CDC42BPB-204ENST00000559043 ELAC1Q9H777 363 aaKnown RBP17.02■□□□□ 0.32
CDC42BPB-204ENST00000559043 FBXL5Q9UKA1 691 aa17.02■□□□□ 0.32
CDC42BPB-204ENST00000559043 SMIM28A0A1B0GU29 152 aa17.02■□□□□ 0.31
CDC42BPB-204ENST00000559043 GTPBP10A4D1E9 387 aaKnown RBP17.02■□□□□ 0.31
CDC42BPB-204ENST00000559043 ERLIN1O75477 346 aa17.02■□□□□ 0.31
CDC42BPB-204ENST00000559043 PON1P27169 355 aa17.02■□□□□ 0.31
CDC42BPB-204ENST00000559043 ZBTB6Q15916 424 aa17.02■□□□□ 0.31
CDC42BPB-204ENST00000559043 SLC18A3Q16572 532 aa17.02■□□□□ 0.31
CDC42BPB-204ENST00000559043 FAM43BQ6ZT52 329 aaPredicted RBP17.02■□□□□ 0.31
CDC42BPB-204ENST00000559043 INTS8Q75QN2 995 aaKnown RBP17.02■□□□□ 0.31
CDC42BPB-204ENST00000559043 ZNF572Q7Z3I7 529 aaPredicted RBP17.02■□□□□ 0.31
CDC42BPB-204ENST00000559043 HELQQ8TDG4 1101 aa17.02■□□□□ 0.31
CDC42BPB-204ENST00000559043 TMC2Q8TDI7 906 aa17.02■□□□□ 0.31
CDC42BPB-204ENST00000559043 HERVK_113Q902F9 699 aa17.02■□□□□ 0.31
CDC42BPB-204ENST00000559043 ALS2CR12Q96Q35 445 aa17.02■□□□□ 0.31
CDC42BPB-204ENST00000559043 RSAD1Q9HA92 442 aa17.02■□□□□ 0.31
CDC42BPB-204ENST00000559043 CNTN3Q9P232 1028 aa17.02■□□□□ 0.31
CDC42BPB-204ENST00000559043 SALL4Q9UJQ4 1053 aa17.02■□□□□ 0.31
CDC42BPB-204ENST00000559043 GIT1Q9Y2X7 761 aa17.02■□□□□ 0.31
CDC42BPB-204ENST00000559043 PCDHB7Q9Y5E2 793 aa17.02■□□□□ 0.31
CDC42BPB-204ENST00000559043 BAIAP3O94812 1187 aa17.01■□□□□ 0.31
CDC42BPB-204ENST00000559043 SLC9A1P19634 815 aa17.01■□□□□ 0.31
CDC42BPB-204ENST00000559043 GUCY2FP51841 1108 aa17.01■□□□□ 0.31
CDC42BPB-204ENST00000559043 VSNL1P62760 191 aa17.01■□□□□ 0.31
CDC42BPB-204ENST00000559043 POU5F1Q01860 360 aaKnown RBP17.01■□□□□ 0.31
CDC42BPB-204ENST00000559043 EXOC3L4Q17RC7 722 aa17.01■□□□□ 0.31
CDC42BPB-204ENST00000559043 KLHDC7AQ5VTJ3 777 aa17.01■□□□□ 0.31
CDC42BPB-204ENST00000559043 C18orf25Q96B23 403 aaPredicted RBP17.01■□□□□ 0.31
CDC42BPB-204ENST00000559043 PGBD4Q96DM1 585 aa17.01■□□□□ 0.31
CDC42BPB-204ENST00000559043 GDF15Q99988 308 aa17.01■□□□□ 0.31
CDC42BPB-204ENST00000559043 PLEKHA5Q9HAU0 1116 aa17.01■□□□□ 0.31
CDC42BPB-204ENST00000559043 LUC7LQ9NQ29 371 aaKnown RBP17.01■□□□□ 0.31
CDC42BPB-204ENST00000559043 PDE4DIPQ5VU43 2346 aa17.01■□□□□ 0.31
CDC42BPB-204ENST00000559043 ZBBXA8MT70 800 aa17■□□□□ 0.31
CDC42BPB-204ENST00000559043 B4GALT3O60512 393 aa17■□□□□ 0.31
CDC42BPB-204ENST00000559043 LRRN2O75325 713 aa17■□□□□ 0.31
CDC42BPB-204ENST00000559043 ACTN1P12814 892 aa17■□□□□ 0.31
CDC42BPB-204ENST00000559043 UCHL3P15374 230 aa17■□□□□ 0.31
CDC42BPB-204ENST00000559043 SCNN1GP51170 649 aa17■□□□□ 0.31
CDC42BPB-204ENST00000559043 YARSP54577 528 aaKnown RBP17■□□□□ 0.31
CDC42BPB-204ENST00000559043 ITIH3Q06033 890 aa17■□□□□ 0.31
CDC42BPB-204ENST00000559043 RAPGEF1Q13905 1077 aa17■□□□□ 0.31
CDC42BPB-204ENST00000559043 SHHQ15465 462 aa17■□□□□ 0.31
CDC42BPB-204ENST00000559043 NAB2Q15742 525 aa17■□□□□ 0.31
CDC42BPB-204ENST00000559043 ASIC2Q16515 512 aa17■□□□□ 0.31
CDC42BPB-204ENST00000559043 DCAF17Q5H9S7 520 aaPredicted RBP17■□□□□ 0.31
CDC42BPB-204ENST00000559043 RASIP1Q5U651 963 aa17■□□□□ 0.31
CDC42BPB-204ENST00000559043 FAM117BQ6P1L5 589 aa17■□□□□ 0.31
CDC42BPB-204ENST00000559043 PSRC1Q6PGN9 363 aaPredicted RBP17■□□□□ 0.31
CDC42BPB-204ENST00000559043 CREG2Q8IUH2 290 aa17■□□□□ 0.31
CDC42BPB-204ENST00000559043 NPAS4Q8IUM7 802 aa17■□□□□ 0.31
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