RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 SPG21Q9NZD8 308 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 NXF1Q9UBU9 619 aaKnown RBP7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 STK39Q9UEW8 545 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 MTUS1Q9ULD2 1270 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 COLQQ9Y215 455 aaPredicted RBP7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 YBX2Q9Y2T7 364 aaKnown RBP7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 COQ4Q9Y3A0 265 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 SNX9Q9Y5X1 595 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 CITO14578 2027 aa7.09□□□□□ -1.27
CHRNA3-204ENST00000559002 KPNA7A9QM74 516 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 F8W810 466 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 SPTLC1O15269 473 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 TEX33O43247 280 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 AP5Z1O43299 807 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 HUS1O60921 280 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 FGF18O76093 207 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 RB1P06400 928 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 BMPR1AP36894 532 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 BRCC3P46736 316 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 LILRA4P59901 499 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 LRIT3Q3SXY7 679 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 SPOPLQ6IQ16 392 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 FUT10Q6P4F1 479 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 TRIM65Q6PJ69 517 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 SARM1Q6SZW1 724 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 METTL23Q86XA0 190 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 PPM1KQ8N3J5 372 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 C3orf58Q8NDZ4 430 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 APPL2Q8NEU8 664 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 FBXO22Q8NEZ5 403 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 NEK11Q8NG66 645 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 CXorf38Q8TB03 319 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 SEMA4DQ92854 862 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 SUSD3Q96L08 255 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 SENP8Q96LD8 212 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 FAM81BQ96LP2 452 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 NAP1L5Q96NT1 182 aaPredicted RBP7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 C17orf80Q9BSJ5 609 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 C11orf84Q9BUA3 381 aaPredicted RBP7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 PLVAPQ9BX97 442 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 XPO4Q9C0E2 1151 aaKnown RBP7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 XYLT2Q9H1B5 865 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 VRTNQ9H8Y1 702 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 MARCH5Q9NX47 278 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 APEX2Q9UBZ4 518 aa7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 PUF60Q9UHX1 559 aaKnown RBP7.08□□□□□ -1.28
CHRNA3-204ENST00000559002 PTPRSQ13332 1948 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 FNDC1Q4ZHG4 1894 aaPredicted RBP7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 A0A1W2PQC6 194 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 I3L4J1 428 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 CYB561D2O14569 222 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 SYN3O14994 580 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 LPXNO60711 386 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 ARHGEF15O94989 841 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 SOD2P04179 222 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 ITGB1P05556 798 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 URODP06132 367 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 TRIM21P19474 475 aaKnown RBP7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 SLC9A1P19634 815 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 TYMPP19971 482 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 RFX1P22670 979 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 TBXAS1P24557 533 aaPredicted RBP7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 PON1P27169 355 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 CA8P35219 290 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 AARSP49588 968 aaKnown RBP eCLIP7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 ZNF75DP51815 510 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 MFAP3P55082 362 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 ERVK-21P61565 698 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 YWHAEP62258 255 aaKnown RBP7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 TAP1Q03518 808 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 CUL2Q13617 745 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 GSE1Q14687 1217 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 BMS1Q14692 1282 aaKnown RBP7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 NR1I3Q14994 352 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 PTPN21Q16825 1174 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 USP41Q3LFD5 358 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 TIGD5Q53EQ6 642 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 FAM171A1Q5VUB5 890 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 KIAA1841Q6NSI8 718 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 DPH6Q7L8W6 267 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 TMEM173Q86WV6 379 aaPredicted RBP7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 CEP57Q86XR8 500 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 ADGRF2Q8IZF7 708 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 TMEM86AQ8N2M4 240 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 TOP6BLQ8N6T0 577 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 KLHL23Q8NBE8 558 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 BCL7CQ8WUZ0 217 aaPredicted RBP7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 ARNTL2Q8WYA1 636 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 ANP32BQ92688 251 aaKnown RBP7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 ELMO3Q96BJ8 720 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 ERGIC2Q96RQ1 377 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 TTPALQ9BTX7 342 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 HERC2P3Q9BVR0 1158 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 DNAI2Q9GZS0 605 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 SNX25Q9H3E2 840 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 SMYD3Q9H7B4 428 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 CERS4Q9HA82 394 aa7.07□□□□□ -1.28
CHRNA3-204ENST00000559002 GRPEL1Q9HAV7 217 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms