RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 STX10O60499 249 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 DNAJB1P25685 340 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 TKTP29401 623 aaKnown RBP13.38□□□□□ -0.27
GABPB1-208ENST00000558970 TAF6P49848 677 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 MARSP56192 900 aaKnown RBP13.38□□□□□ -0.27
GABPB1-208ENST00000558970 TPM4P67936 248 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 CLDN10P78369 228 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 RBP5P82980 135 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 KRT17Q04695 432 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 LRMPQ12912 555 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 MAN2A1Q16706 1144 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 PTPN21Q16825 1174 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 ZNF699Q32M78 642 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 ZACNQ401N2 412 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 SV2CQ496J9 727 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 TIGD5Q53EQ6 642 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 FAM171A1Q5VUB5 890 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 PLPP4Q5VZY2 271 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 CD300LGQ6UXG3 332 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 GLYCTKQ8IVS8 523 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 VPS52Q8N1B4 723 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 POF1BQ8WVV4 589 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 SEMA4DQ92854 862 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 HPDLQ96IR7 371 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 SAMD11Q96NU1 681 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 CRACR2AQ9BSW2 395 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 ENTPD7Q9NQZ7 604 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 NXF1Q9UBU9 619 aaKnown RBP13.38□□□□□ -0.27
GABPB1-208ENST00000558970 POLIQ9UNA4 740 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 SNX9Q9Y5X1 595 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 TRANK1O15050 2925 aa13.38□□□□□ -0.27
GABPB1-208ENST00000558970 SF3B1O75533 1304 aaKnown RBP eCLIP13.38□□□□□ -0.27
GABPB1-208ENST00000558970 REV3LO60673 3130 aa13.37□□□□□ -0.27
GABPB1-208ENST00000558970 H3BNC9 293 aa13.37□□□□□ -0.27
GABPB1-208ENST00000558970 TPM2P07951 284 aa13.37□□□□□ -0.27
GABPB1-208ENST00000558970 EEF1GP26641 437 aaKnown RBP13.37□□□□□ -0.27
GABPB1-208ENST00000558970 CDR1P51861 262 aa13.37□□□□□ -0.27
GABPB1-208ENST00000558970 AP3M2P53677 418 aa13.37□□□□□ -0.27
GABPB1-208ENST00000558970 LILRA4P59901 499 aa13.37□□□□□ -0.27
GABPB1-208ENST00000558970 MYO1EQ12965 1108 aa13.37□□□□□ -0.27
GABPB1-208ENST00000558970 GRIN2CQ14957 1233 aa13.37□□□□□ -0.27
GABPB1-208ENST00000558970 VWA3BQ502W6 1294 aa13.37□□□□□ -0.27
GABPB1-208ENST00000558970 PRSS55Q6UWB4 352 aaPredicted RBP13.37□□□□□ -0.27
GABPB1-208ENST00000558970 C15orf39Q6ZRI6 1047 aa13.37□□□□□ -0.27
GABPB1-208ENST00000558970 FBXL13Q8NEE6 735 aa13.37□□□□□ -0.27
GABPB1-208ENST00000558970 ANKRD20A12PQ8NF67 263 aa13.37□□□□□ -0.27
GABPB1-208ENST00000558970 CXorf38Q8TB03 319 aa13.37□□□□□ -0.27
GABPB1-208ENST00000558970 MICAL1Q8TDZ2 1067 aa13.37□□□□□ -0.27
GABPB1-208ENST00000558970 MMS19Q96T76 1030 aa13.37□□□□□ -0.27
GABPB1-208ENST00000558970 PLVAPQ9BX97 442 aa13.37□□□□□ -0.27
GABPB1-208ENST00000558970 IMPG2Q9BZV3 1241 aa13.37□□□□□ -0.27
GABPB1-208ENST00000558970 TMEM265A0A087WTH1 108 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 KPNA7A9QM74 516 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 C5orf67F2Z3F1 127 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 CYB561D2O14569 222 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 CAVIN2O95810 425 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 RB1P06400 928 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 ZNF18P17022 549 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 GTF2H1P32780 548 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 IRS1P35568 1242 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 RAP1GAPP47736 663 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 COPB1P53618 953 aaKnown RBP13.36□□□□□ -0.27
GABPB1-208ENST00000558970 ERVFC1P60507 584 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 TNNC1P63316 161 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 NOP14P78316 857 aaKnown RBP13.36□□□□□ -0.27
GABPB1-208ENST00000558970 PLCB2Q00722 1185 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 APBA1Q02410 837 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 WDR72Q3MJ13 1102 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 MIIPQ5JXC2 388 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 KIAA1841Q6NSI8 718 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 TMC7Q7Z402 723 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 DDX53Q86TM3 631 aaKnown RBP13.36□□□□□ -0.27
GABPB1-208ENST00000558970 GAS2L3Q86XJ1 694 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 MICALL1Q8N3F8 863 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 SPPL3Q8TCT6 385 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 SENP8Q96LD8 212 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 CDX2Q99626 313 aaPredicted RBP13.36□□□□□ -0.27
GABPB1-208ENST00000558970 TCF25Q9BQ70 676 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 NDST4Q9H3R1 872 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 TLR9Q9NR96 1032 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 GCNT4Q9P109 453 aa13.36□□□□□ -0.27
GABPB1-208ENST00000558970 PUF60Q9UHX1 559 aaKnown RBP13.36□□□□□ -0.27
GABPB1-208ENST00000558970 MYO9BQ13459 2157 aa13.35□□□□□ -0.27
GABPB1-208ENST00000558970 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.35□□□□□ -0.27
GABPB1-208ENST00000558970 TMEM189-UBE2V1I3L0A0 370 aa13.35□□□□□ -0.27
GABPB1-208ENST00000558970 TRAPPC3O43617 180 aa13.35□□□□□ -0.27
GABPB1-208ENST00000558970 N4BP1O75113 896 aaKnown RBP13.35□□□□□ -0.27
GABPB1-208ENST00000558970 SERPINC1P01008 464 aa13.35□□□□□ -0.27
GABPB1-208ENST00000558970 SOD2P04179 222 aa13.35□□□□□ -0.27
GABPB1-208ENST00000558970 URODP06132 367 aa13.35□□□□□ -0.27
GABPB1-208ENST00000558970 ODC1P11926 461 aa13.35□□□□□ -0.27
GABPB1-208ENST00000558970 RPL17P18621 184 aaKnown RBP13.35□□□□□ -0.27
GABPB1-208ENST00000558970 IGFBP4P22692 258 aa13.35□□□□□ -0.27
GABPB1-208ENST00000558970 PNPLA4P41247 253 aa13.35□□□□□ -0.27
GABPB1-208ENST00000558970 GLUD2P49448 558 aa13.35□□□□□ -0.27
GABPB1-208ENST00000558970 PLCB3Q01970 1234 aa13.35□□□□□ -0.27
GABPB1-208ENST00000558970 ENPEPQ07075 957 aa13.35□□□□□ -0.27
GABPB1-208ENST00000558970 ZNF667Q5HYK9 610 aa13.35□□□□□ -0.27
GABPB1-208ENST00000558970 RTP2Q5QGT7 225 aa13.35□□□□□ -0.27
GABPB1-208ENST00000558970 LRRC52Q8N7C0 313 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms