RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 RNF168Q8IYW5 571 aaPredicted RBP6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 MRPL43Q8N983 215 aaKnown RBP6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 AUTS2Q8WXX7 1259 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 KCNN1Q92952 543 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 ZNF396Q96N95 335 aaPredicted RBP6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 FAM193BQ96PV7 902 aaPredicted RBP6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 RPS6KC1Q96S38 1066 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 FIZ1Q96SL8 496 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 CDCA3Q99618 268 aaPredicted RBP6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 PAAF1Q9BRP4 392 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 MRPL4Q9BYD3 311 aaKnown RBP6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 NIF3L1Q9GZT8 377 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 LARSQ9P2J5 1176 aaKnown RBP6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 STK17AQ9UEE5 414 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 FAN1Q9Y2M0 1017 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 GDAQ9Y2T3 454 aa6.6□□□□□ -1.35
CTDSPL2-204ENST00000558966 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 A6NHS1 94 aa6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 MYMKA6NI61 221 aa6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 MEFVO15553 781 aaPredicted RBP6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 MBTPS2O43462 519 aa6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 PPP6R2O75170 966 aa6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 MICAL2O94851 1124 aa6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 ALDH2P05091 517 aa6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 DDIT3P35638 169 aa6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 PDCD11Q14690 1871 aaKnown RBP6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 PTPN14Q15678 1187 aa6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 MPZL3Q6UWV2 235 aa6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 TAS1R1Q7RTX1 841 aa6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 HAUS6Q7Z4H7 955 aa6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 GJD3Q8N144 294 aa6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 SMRP1Q8NCR6 262 aa6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 RABGGTAQ92696 567 aa6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 ZBTB45Q96K62 511 aaPredicted RBP6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 SUSD3Q96L08 255 aa6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 DMRTB1Q96MA1 342 aa6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 HAPLN2Q9GZV7 340 aa6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 PARVGQ9HBI0 331 aa6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 ZDHHC3Q9NYG2 299 aa6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 CCDC39Q9UFE4 941 aa6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 CD207Q9UJ71 328 aa6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 ZDHHC9Q9Y397 364 aa6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 IRAK3Q9Y616 596 aa6.59□□□□□ -1.35
CTDSPL2-204ENST00000558966 VWA8A3KMH1 1905 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 CASTOR2A6NHX0 329 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 TTLL8A6PVC2 850 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 K7ENM7 598 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 CLASP2O75122 1294 aaKnown RBP6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 TBCAO75347 108 aaKnown RBP6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 TOM1L1O75674 476 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 KIF4AO95239 1232 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 CXCL14O95715 111 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 SOD2P04179 222 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 KRT18P05783 430 aaKnown RBP6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 MCF2P10911 925 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 NMT1P30419 496 aaKnown RBP6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 STRN3Q13033 797 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 COASYQ13057 564 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 TUSC3Q13454 348 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 SMAD4Q13485 552 aaKnown RBP6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 SMAD2Q15796 467 aaKnown RBP6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 GLRA4Q5JXX5 417 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 AXDND1Q5T1B0 1012 aaPredicted RBP6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 RRAGBQ5VZM2 374 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 LLGL2Q6P1M3 1020 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 SHC4Q6S5L8 630 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 ZPBP2Q6X784 338 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 TMEM184AQ6ZMB5 413 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 CCDC73Q6ZRK6 1079 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 DYMQ7RTS9 669 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 FAM178BQ8IXR5 827 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 MYCT1Q8N699 235 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 PDILTQ8N807 584 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 DNAJC19Q96DA6 116 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 PPP1R10Q96QC0 940 aaKnown RBP6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 HERC2P3Q9BVR0 1158 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 PANK2Q9BZ23 570 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 GPR62Q9BZJ7 368 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 ZHX3Q9H4I2 956 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 CD320Q9NPF0 282 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 ANKFY1Q9P2R3 1169 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 KCNG1Q9UIX4 513 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 HCFC2Q9Y5Z7 792 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 TCHHQ07283 1943 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 PLXNA3P51805 1871 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 FSD2A1L4K1 749 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 H0YCG3 227 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 TGFBR3LH3BV60 316 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 CUTAO60888 179 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 PIGRP01833 764 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 THP07101 528 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 HARSP12081 509 aaKnown RBP6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 CA8P35219 290 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 STAT6P42226 847 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 OSTNP61366 133 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 SOX4Q06945 474 aaPredicted RBP6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 MCL1Q07820 350 aa6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 HSP90AA2PQ14568 343 aaPredicted RBP6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 NOLC1Q14978 699 aaKnown RBP eCLIP6.58□□□□□ -1.36
CTDSPL2-204ENST00000558966 SEZ6Q53EL9 994 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms