RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 ZNF689Q96CS4 500 aaPredicted RBP19.41■□□□□ 0.7
CLPX-203ENST00000558958 DNAJC7Q99615 494 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 ARID3AQ99856 593 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 PAAF1Q9BRP4 392 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 GPR88Q9GZN0 384 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 RC3H2Q9HBD1 1191 aaKnown RBP19.41■□□□□ 0.7
CLPX-203ENST00000558958 CXXC1Q9P0U4 656 aaPredicted RBP19.41■□□□□ 0.7
CLPX-203ENST00000558958 NXF1Q9UBU9 619 aaKnown RBP19.41■□□□□ 0.7
CLPX-203ENST00000558958 MYO6Q9UM54 1294 aa19.41■□□□□ 0.7
CLPX-203ENST00000558958 PTMAP06454 111 aaKnown RBP19.4■□□□□ 0.7
CLPX-203ENST00000558958 SCN1AP35498 2009 aa19.4■□□□□ 0.7
CLPX-203ENST00000558958 ASPAP45381 313 aa19.4■□□□□ 0.7
CLPX-203ENST00000558958 TAF6P49848 677 aa19.4■□□□□ 0.7
CLPX-203ENST00000558958 LILRA4P59901 499 aa19.4■□□□□ 0.7
CLPX-203ENST00000558958 DRAP1Q14919 205 aaPredicted RBP19.4■□□□□ 0.7
CLPX-203ENST00000558958 ARHGAP44Q17R89 818 aa19.4■□□□□ 0.7
CLPX-203ENST00000558958 PDXDC1Q6P996 788 aa19.4■□□□□ 0.7
CLPX-203ENST00000558958 JAKMIP2Q96AA8 810 aa19.4■□□□□ 0.7
CLPX-203ENST00000558958 FAM193BQ96PV7 902 aaPredicted RBP19.4■□□□□ 0.7
CLPX-203ENST00000558958 SPAG5Q96R06 1193 aa19.4■□□□□ 0.7
CLPX-203ENST00000558958 NRDE2Q9H7Z3 1164 aa19.4■□□□□ 0.7
CLPX-203ENST00000558958 POLIQ9UNA4 740 aa19.4■□□□□ 0.7
CLPX-203ENST00000558958 FNDC1Q4ZHG4 1894 aaPredicted RBP19.39■□□□□ 0.69
CLPX-203ENST00000558958 COL4A6Q14031 1691 aa19.39■□□□□ 0.69
CLPX-203ENST00000558958 LRRC53A6NM62 1247 aa19.39■□□□□ 0.69
CLPX-203ENST00000558958 F8VZ95 297 aa19.39■□□□□ 0.69
CLPX-203ENST00000558958 SPTLC1O15269 473 aa19.39■□□□□ 0.69
CLPX-203ENST00000558958 P4HA1P13674 534 aa19.39■□□□□ 0.69
CLPX-203ENST00000558958 IGFBP6P24592 240 aaPredicted RBP19.39■□□□□ 0.69
CLPX-203ENST00000558958 SV2CQ496J9 727 aa19.39■□□□□ 0.69
CLPX-203ENST00000558958 PAN2Q504Q3 1202 aaKnown RBP19.39■□□□□ 0.69
CLPX-203ENST00000558958 LRRC43Q8N309 656 aa19.39■□□□□ 0.69
CLPX-203ENST00000558958 OR8K1Q8NGG5 319 aa19.39■□□□□ 0.69
CLPX-203ENST00000558958 SHC3Q92529 594 aa19.39■□□□□ 0.69
CLPX-203ENST00000558958 RABGGTAQ92696 567 aa19.39■□□□□ 0.69
CLPX-203ENST00000558958 BCO2Q9BYV7 579 aa19.39■□□□□ 0.69
CLPX-203ENST00000558958 NUCKS1Q9H1E3 243 aaKnown RBP19.39■□□□□ 0.69
CLPX-203ENST00000558958 ABHD10Q9NUJ1 306 aa19.39■□□□□ 0.69
CLPX-203ENST00000558958 GDAP2Q9NXN4 497 aa19.39■□□□□ 0.69
CLPX-203ENST00000558958 DNAJB4Q9UDY4 337 aa19.39■□□□□ 0.69
CLPX-203ENST00000558958 KPNA7A9QM74 516 aa19.38■□□□□ 0.69
CLPX-203ENST00000558958 FOXN3O00409 490 aaPredicted RBP19.38■□□□□ 0.69
CLPX-203ENST00000558958 MAGEA10P43363 369 aaPredicted RBP19.38■□□□□ 0.69
CLPX-203ENST00000558958 TNNC1P63316 161 aa19.38■□□□□ 0.69
CLPX-203ENST00000558958 FAM117BQ6P1L5 589 aa19.38■□□□□ 0.69
CLPX-203ENST00000558958 DCLRE1AQ6PJP8 1040 aa19.38■□□□□ 0.69
CLPX-203ENST00000558958 C3orf58Q8NDZ4 430 aa19.38■□□□□ 0.69
CLPX-203ENST00000558958 PANX2Q96RD6 677 aa19.38■□□□□ 0.69
CLPX-203ENST00000558958 SNX9Q9Y5X1 595 aa19.38■□□□□ 0.69
CLPX-203ENST00000558958 B3GAT3O94766 335 aa19.37■□□□□ 0.69
CLPX-203ENST00000558958 GJB5O95377 273 aa19.37■□□□□ 0.69
CLPX-203ENST00000558958 ACO1P21399 889 aaKnown RBP19.37■□□□□ 0.69
CLPX-203ENST00000558958 HNRNPH3P31942 346 aaKnown RBP19.37■□□□□ 0.69
CLPX-203ENST00000558958 DEKP35659 375 aaKnown RBP19.37■□□□□ 0.69
CLPX-203ENST00000558958 RASIP1Q5U651 963 aa19.37■□□□□ 0.69
CLPX-203ENST00000558958 E4F1Q66K89 784 aaPredicted RBP19.37■□□□□ 0.69
CLPX-203ENST00000558958 CD300LGQ6UXG3 332 aa19.37■□□□□ 0.69
CLPX-203ENST00000558958 SCARA5Q6ZMJ2 495 aa19.37■□□□□ 0.69
CLPX-203ENST00000558958 UBR7Q8N806 425 aa19.37■□□□□ 0.69
CLPX-203ENST00000558958 PHOSPHO2Q8TCD6 241 aa19.37■□□□□ 0.69
CLPX-203ENST00000558958 SYN2Q92777 582 aaPredicted RBP19.37■□□□□ 0.69
CLPX-203ENST00000558958 MTIF3Q9H2K0 278 aaKnown RBP19.37■□□□□ 0.69
CLPX-203ENST00000558958 CYP3A43Q9HB55 503 aa19.37■□□□□ 0.69
CLPX-203ENST00000558958 HCSTQ9UBK5 93 aa19.37■□□□□ 0.69
CLPX-203ENST00000558958 SLC4A7Q9Y6M7 1214 aa19.37■□□□□ 0.69
CLPX-203ENST00000558958 WEE2P0C1S8 567 aa19.36■□□□□ 0.69
CLPX-203ENST00000558958 PNMA6AP0CW24 399 aaPredicted RBP19.36■□□□□ 0.69
CLPX-203ENST00000558958 PAX3P23760 479 aa19.36■□□□□ 0.69
CLPX-203ENST00000558958 SOX5P35711 763 aa19.36■□□□□ 0.69
CLPX-203ENST00000558958 STAT1P42224 750 aa19.36■□□□□ 0.69
CLPX-203ENST00000558958 AARSP49588 968 aaKnown RBP eCLIP19.36■□□□□ 0.69
CLPX-203ENST00000558958 SFMBT2Q5VUG0 894 aa19.36■□□□□ 0.69
CLPX-203ENST00000558958 SMYD5Q6GMV2 418 aa19.36■□□□□ 0.69
CLPX-203ENST00000558958 LIMS2Q7Z4I7 341 aa19.36■□□□□ 0.69
CLPX-203ENST00000558958 FAM71AQ8IYT1 594 aa19.36■□□□□ 0.69
CLPX-203ENST00000558958 CMTR2Q8IYT2 770 aaKnown RBP19.36■□□□□ 0.69
CLPX-203ENST00000558958 MMS19Q96T76 1030 aa19.36■□□□□ 0.69
CLPX-203ENST00000558958 SLC9A7Q96T83 725 aa19.36■□□□□ 0.69
CLPX-203ENST00000558958 TMEM175Q9BSA9 504 aa19.36■□□□□ 0.69
CLPX-203ENST00000558958 SDCBP2Q9H190 292 aa19.36■□□□□ 0.69
CLPX-203ENST00000558958 FAM124BQ9H5Z6 455 aaPredicted RBP19.36■□□□□ 0.69
CLPX-203ENST00000558958 CWH43Q9H720 699 aa19.36■□□□□ 0.69
CLPX-203ENST00000558958 SMYD3Q9H7B4 428 aa19.36■□□□□ 0.69
CLPX-203ENST00000558958 AIPL1Q9NZN9 384 aa19.36■□□□□ 0.69
CLPX-203ENST00000558958 PTPRSQ13332 1948 aa19.36■□□□□ 0.69
CLPX-203ENST00000558958 TMEM189-UBE2V1I3L0A0 370 aa19.35■□□□□ 0.69
CLPX-203ENST00000558958 KIF4AO95239 1232 aa19.35■□□□□ 0.69
CLPX-203ENST00000558958 OR1G1P47890 313 aa19.35■□□□□ 0.69
CLPX-203ENST00000558958 HTRA4P83105 476 aaPredicted RBP19.35■□□□□ 0.69
CLPX-203ENST00000558958 TSR1Q2NL82 804 aaKnown RBP19.35■□□□□ 0.69
CLPX-203ENST00000558958 WDR59Q6PJI9 974 aa19.35■□□□□ 0.69
CLPX-203ENST00000558958 LRRC8AQ8IWT6 810 aa19.35■□□□□ 0.69
CLPX-203ENST00000558958 YME1L1Q96TA2 773 aa19.35■□□□□ 0.69
CLPX-203ENST00000558958 CISHQ9NSE2 258 aa19.35■□□□□ 0.69
CLPX-203ENST00000558958 CNTN6Q9UQ52 1028 aa19.35■□□□□ 0.69
CLPX-203ENST00000558958 F8W810 466 aa19.35■□□□□ 0.69
CLPX-203ENST00000558958 NRP1O14786 923 aa19.35■□□□□ 0.69
CLPX-203ENST00000558958 ALDH2P05091 517 aa19.35■□□□□ 0.69
CLPX-203ENST00000558958 ITGB1P05556 798 aa19.35■□□□□ 0.69
CLPX-203ENST00000558958 GALTP07902 379 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms