RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 LOC730098B7Z3J9 87 aa13.03□□□□□ -0.32
TPM1-216ENST00000558910 CLIC2O15247 247 aa13.03□□□□□ -0.32
TPM1-216ENST00000558910 PIGRP01833 764 aa13.03□□□□□ -0.32
TPM1-216ENST00000558910 PFKFB1P16118 471 aa13.03□□□□□ -0.32
TPM1-216ENST00000558910 ADSSP30520 456 aa13.03□□□□□ -0.32
TPM1-216ENST00000558910 NTHL1P78549 312 aa13.03□□□□□ -0.32
TPM1-216ENST00000558910 AMPD3Q01432 767 aa13.03□□□□□ -0.32
TPM1-216ENST00000558910 TMEM132DQ14C87 1099 aa13.03□□□□□ -0.32
TPM1-216ENST00000558910 CTXN3Q4LDR2 81 aa13.03□□□□□ -0.32
TPM1-216ENST00000558910 LIN9Q5TKA1 542 aa13.03□□□□□ -0.32
TPM1-216ENST00000558910 SLFN12LQ6IEE8 588 aa13.03□□□□□ -0.32
TPM1-216ENST00000558910 GET4Q7L5D6 327 aaPredicted RBP13.03□□□□□ -0.32
TPM1-216ENST00000558910 GPR149Q86SP6 731 aa13.03□□□□□ -0.32
TPM1-216ENST00000558910 TDRD5Q8NAT2 981 aaKnown RBP13.03□□□□□ -0.32
TPM1-216ENST00000558910 BEST2Q8NFU1 509 aa13.03□□□□□ -0.32
TPM1-216ENST00000558910 PIK3R5Q8WYR1 880 aa13.03□□□□□ -0.32
TPM1-216ENST00000558910 LRRC27Q9C0I9 530 aa13.03□□□□□ -0.32
TPM1-216ENST00000558910 SMOC2Q9H3U7 446 aa13.03□□□□□ -0.32
TPM1-216ENST00000558910 SLC39A2Q9NP94 309 aa13.03□□□□□ -0.32
TPM1-216ENST00000558910 SEL1LQ9UBV2 794 aa13.03□□□□□ -0.32
TPM1-216ENST00000558910 LIMD1Q9UGP4 676 aa13.03□□□□□ -0.32
TPM1-216ENST00000558910 CPSF3Q9UKF6 684 aaKnown RBP13.03□□□□□ -0.32
TPM1-216ENST00000558910 UBQLN1Q9UMX0 589 aaKnown RBP13.03□□□□□ -0.32
TPM1-216ENST00000558910 TRIOO75962 3097 aa13.03□□□□□ -0.32
TPM1-216ENST00000558910 PLXNA3P51805 1871 aa13.02□□□□□ -0.32
TPM1-216ENST00000558910 PI4K2BG5E9Z4 385 aa13.02□□□□□ -0.33
TPM1-216ENST00000558910 FAM189A1O60320 539 aa13.02□□□□□ -0.33
TPM1-216ENST00000558910 C8AP07357 584 aa13.02□□□□□ -0.33
TPM1-216ENST00000558910 OR4Q2P0C623 313 aa13.02□□□□□ -0.33
TPM1-216ENST00000558910 PDIA4P13667 645 aaKnown RBP13.02□□□□□ -0.33
TPM1-216ENST00000558910 FGFR3P22607 806 aa13.02□□□□□ -0.33
TPM1-216ENST00000558910 RPL9P32969 192 aaKnown RBP13.02□□□□□ -0.33
TPM1-216ENST00000558910 WNT7BP56706 349 aa13.02□□□□□ -0.33
TPM1-216ENST00000558910 TFAMQ00059 246 aaKnown RBP13.02□□□□□ -0.33
TPM1-216ENST00000558910 CREMQ03060 361 aa13.02□□□□□ -0.33
TPM1-216ENST00000558910 TMEM31Q5JXX7 168 aa13.02□□□□□ -0.33
TPM1-216ENST00000558910 PPM1LQ5SGD2 360 aa13.02□□□□□ -0.33
TPM1-216ENST00000558910 ARMCX5Q6P1M9 558 aa13.02□□□□□ -0.33
TPM1-216ENST00000558910 ELMSAN1Q6PJG2 1045 aa13.02□□□□□ -0.33
TPM1-216ENST00000558910 CCDC149Q6ZUS6 474 aa13.02□□□□□ -0.33
TPM1-216ENST00000558910 FSIP1Q8NA03 581 aa13.02□□□□□ -0.33
TPM1-216ENST00000558910 SLC7A14Q8TBB6 771 aa13.02□□□□□ -0.33
TPM1-216ENST00000558910 KBTBD4Q9NVX7 518 aa13.02□□□□□ -0.33
TPM1-216ENST00000558910 FNIP2Q9P278 1114 aa13.02□□□□□ -0.33
TPM1-216ENST00000558910 NR2E1Q9Y466 385 aa13.02□□□□□ -0.33
TPM1-216ENST00000558910 MORC2Q9Y6X9 1032 aaPredicted RBP13.02□□□□□ -0.33
TPM1-216ENST00000558910 CITO14578 2027 aa13.01□□□□□ -0.33
TPM1-216ENST00000558910 FRMD3A2A2Y4 597 aa13.01□□□□□ -0.33
TPM1-216ENST00000558910 TMEM189-UBE2V1I3L0A0 370 aa13.01□□□□□ -0.33
TPM1-216ENST00000558910 ALADP13716 330 aa13.01□□□□□ -0.33
TPM1-216ENST00000558910 CYP2J2P51589 502 aa13.01□□□□□ -0.33
TPM1-216ENST00000558910 FAM26FQ5R3K3 315 aa13.01□□□□□ -0.33
TPM1-216ENST00000558910 ATL3Q6DD88 541 aa13.01□□□□□ -0.33
TPM1-216ENST00000558910 CRELD2Q6UXH1 353 aaPredicted RBP13.01□□□□□ -0.33
TPM1-216ENST00000558910 GRASPQ7Z6J2 395 aaPredicted RBP13.01□□□□□ -0.33
TPM1-216ENST00000558910 HVCN1Q96D96 273 aa13.01□□□□□ -0.33
TPM1-216ENST00000558910 PAGE5Q96GU1 130 aa13.01□□□□□ -0.33
TPM1-216ENST00000558910 NECTIN4Q96NY8 510 aa13.01□□□□□ -0.33
TPM1-216ENST00000558910 PGLYRP2Q96PD5 576 aa13.01□□□□□ -0.33
TPM1-216ENST00000558910 C7orf25Q9BPX7 421 aa13.01□□□□□ -0.33
TPM1-216ENST00000558910 LRFN3Q9BTN0 628 aa13.01□□□□□ -0.33
TPM1-216ENST00000558910 STRA6Q9BX79 667 aa13.01□□□□□ -0.33
TPM1-216ENST00000558910 C1QTNF1Q9BXJ1 281 aa13.01□□□□□ -0.33
TPM1-216ENST00000558910 CUEDC2Q9H467 287 aa13.01□□□□□ -0.33
TPM1-216ENST00000558910 ST6GALNAC4Q9H4F1 302 aa13.01□□□□□ -0.33
TPM1-216ENST00000558910 PLEKHA5Q9HAU0 1116 aa13.01□□□□□ -0.33
TPM1-216ENST00000558910 OLFML3Q9NRN5 406 aa13.01□□□□□ -0.33
TPM1-216ENST00000558910 DPP3Q9NY33 737 aa13.01□□□□□ -0.33
TPM1-216ENST00000558910 RBAKQ9NYW8 714 aaPredicted RBP13.01□□□□□ -0.33
TPM1-216ENST00000558910 MTRRQ9UBK8 725 aa13.01□□□□□ -0.33
TPM1-216ENST00000558910 PRRG1O14668 218 aa13□□□□□ -0.33
TPM1-216ENST00000558910 XPOTO43592 962 aaKnown RBP13□□□□□ -0.33
TPM1-216ENST00000558910 CLSTN1O94985 981 aa13□□□□□ -0.33
TPM1-216ENST00000558910 KRT19P08727 400 aa13□□□□□ -0.33
TPM1-216ENST00000558910 CPB1P15086 417 aa13□□□□□ -0.33
TPM1-216ENST00000558910 ELF1P32519 619 aa13□□□□□ -0.33
TPM1-216ENST00000558910 ABCD1P33897 745 aa13□□□□□ -0.33
TPM1-216ENST00000558910 NDUFA8P51970 172 aa13□□□□□ -0.33
TPM1-216ENST00000558910 ROR1Q01973 937 aa13□□□□□ -0.33
TPM1-216ENST00000558910 POSTNQ15063 836 aa13□□□□□ -0.33
TPM1-216ENST00000558910 KYAT1Q16773 422 aa13□□□□□ -0.33
TPM1-216ENST00000558910 C9orf57Q5W0N0 161 aa13□□□□□ -0.33
TPM1-216ENST00000558910 SCARA3Q6AZY7 606 aa13□□□□□ -0.33
TPM1-216ENST00000558910 LILRA6Q6PI73 481 aa13□□□□□ -0.33
TPM1-216ENST00000558910 ANKS3Q6ZW76 656 aa13□□□□□ -0.33
TPM1-216ENST00000558910 STXBP4Q6ZWJ1 553 aa13□□□□□ -0.33
TPM1-216ENST00000558910 UNC13DQ70J99 1090 aa13□□□□□ -0.33
TPM1-216ENST00000558910 USP37Q86T82 979 aa13□□□□□ -0.33
TPM1-216ENST00000558910 EFCAB13Q8IY85 973 aa13□□□□□ -0.33
TPM1-216ENST00000558910 ING5Q8WYH8 240 aa13□□□□□ -0.33
TPM1-216ENST00000558910 ZNF707Q96C28 371 aaPredicted RBP13□□□□□ -0.33
TPM1-216ENST00000558910 ACSF2Q96CM8 615 aaPredicted RBP13□□□□□ -0.33
TPM1-216ENST00000558910 PRKD2Q9BZL6 878 aa13□□□□□ -0.33
TPM1-216ENST00000558910 GOLPH3LQ9H4A5 285 aa13□□□□□ -0.33
TPM1-216ENST00000558910 PLEKHA4Q9H4M7 779 aa13□□□□□ -0.33
TPM1-216ENST00000558910 CYP4F11Q9HBI6 524 aa13□□□□□ -0.33
TPM1-216ENST00000558910 PDE11AQ9HCR9 933 aa13□□□□□ -0.33
TPM1-216ENST00000558910 C11orf16Q9NQ32 467 aa13□□□□□ -0.33
TPM1-216ENST00000558910 EXOC1Q9NV70 894 aa13□□□□□ -0.33
TPM1-216ENST00000558910 HCFC1R1Q9NWW0 138 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms