RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 ABLIM3O94929 683 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 LRG1P02750 347 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 ADRB2P07550 413 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 GJA1P17302 382 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 CYP3A5P20815 502 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 LILRA4P59901 499 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 YWHAHQ04917 246 aaPredicted RBP13.56□□□□□ -0.24
SMAD3-208ENST00000558827 POSTNQ15063 836 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 PABPC1LQ4VXU2 614 aaKnown RBP13.56□□□□□ -0.24
SMAD3-208ENST00000558827 SLC8B1Q6J4K2 584 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 PARM1Q6UWI2 310 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 CYP26C1Q6V0L0 522 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 BMP8AQ7Z5Y6 402 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 NELFCDQ8IXH7 590 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 UBALD2Q8IYN6 164 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 SLC44A3Q8N4M1 653 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 IQUBQ8NA54 791 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 KCNG4Q8TDN1 519 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 HVCN1Q96D96 273 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 TCEAL4Q96EI5 215 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 TRIM9Q9C026 710 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 TNMDQ9H2S6 317 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 KBTBD4Q9NVX7 518 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 FAM13BQ9NYF5 915 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 CA14Q9ULX7 337 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 SLC27A5Q9Y2P5 690 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 MRPS23Q9Y3D9 190 aaKnown RBP13.56□□□□□ -0.24
SMAD3-208ENST00000558827 A0A1B0GVL5 298 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 M0QZQ0 153 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 PIRO00625 290 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 CLIC2O15247 247 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 SOAT2O75908 522 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 VNN2O95498 520 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 C1RP00736 705 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 RHOP08100 348 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 SCP2P22307 547 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 AVPR2P30518 371 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 HOXD13P35453 343 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 PLA2G5P39877 138 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 TWF1Q12792 350 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 CUL4BQ13620 913 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 SLC5A9Q2M3M2 681 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 UVSSAQ2YD98 709 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 RESP18Q5W5W9 173 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 OVOS1Q6IE37 1185 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 ARMCX5Q6P1M9 558 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 POTEHQ6S545 545 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 GPIHBP1Q8IV16 184 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 CD302Q8IX05 232 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 RDH13Q8NBN7 331 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 PRSS33Q8NF86 280 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 FGF13Q92913 245 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 FGF14Q92915 247 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 KXD1Q9BQD3 176 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 PYM1Q9BRP8 204 aaKnown RBP13.55□□□□□ -0.24
SMAD3-208ENST00000558827 CRISPLD1Q9H336 500 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 MFSD1Q9H3U5 465 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 PDE11AQ9HCR9 933 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 OLFML3Q9NRN5 406 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.55□□□□□ -0.24
SMAD3-208ENST00000558827 EPS15L1Q9UBC2 864 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 RCOR1Q9UKL0 485 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 CDH7Q9ULB5 785 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 INSL5Q9Y5Q6 135 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 NUMBLQ9Y6R0 609 aa13.55□□□□□ -0.24
SMAD3-208ENST00000558827 CYB561D2O14569 222 aa13.54□□□□□ -0.24
SMAD3-208ENST00000558827 MYL4P12829 197 aa13.54□□□□□ -0.24
SMAD3-208ENST00000558827 ATF2P15336 505 aa13.54□□□□□ -0.24
SMAD3-208ENST00000558827 CEBPBP17676 345 aa13.54□□□□□ -0.24
SMAD3-208ENST00000558827 ABCD1P33897 745 aa13.54□□□□□ -0.24
SMAD3-208ENST00000558827 AMPD3Q01432 767 aa13.54□□□□□ -0.24
SMAD3-208ENST00000558827 DUSP4Q13115 394 aa13.54□□□□□ -0.24
SMAD3-208ENST00000558827 SIX5Q8N196 739 aa13.54□□□□□ -0.24
SMAD3-208ENST00000558827 TTC9BQ8N6N2 239 aa13.54□□□□□ -0.24
SMAD3-208ENST00000558827 ATAD1Q8NBU5 361 aa13.54□□□□□ -0.24
SMAD3-208ENST00000558827 C7orf25Q9BPX7 421 aa13.54□□□□□ -0.24
SMAD3-208ENST00000558827 RHOBTB2Q9BYZ6 727 aa13.54□□□□□ -0.24
SMAD3-208ENST00000558827 ASB7Q9H672 318 aa13.54□□□□□ -0.24
SMAD3-208ENST00000558827 GDPD2Q9HCC8 539 aa13.54□□□□□ -0.24
SMAD3-208ENST00000558827 SLC39A2Q9NP94 309 aa13.54□□□□□ -0.24
SMAD3-208ENST00000558827 RBAKQ9NYW8 714 aaPredicted RBP13.54□□□□□ -0.24
SMAD3-208ENST00000558827 IGSF9Q9P2J2 1179 aa13.54□□□□□ -0.24
SMAD3-208ENST00000558827 AFF4Q9UHB7 1163 aaKnown RBP13.54□□□□□ -0.24
SMAD3-208ENST00000558827 CFAP45Q9UL16 551 aa13.54□□□□□ -0.24
SMAD3-208ENST00000558827 KCNH3Q9ULD8 1083 aa13.54□□□□□ -0.24
SMAD3-208ENST00000558827 AGAP1Q9UPQ3 857 aa13.54□□□□□ -0.24
SMAD3-208ENST00000558827 TCHHQ07283 1943 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 ANO9A1A5B4 782 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 PI15O43692 258 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 EXTL3O43909 919 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 OAZ2O95190 189 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 PAPLNO95428 1278 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 ITGB3P05106 788 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 KRT19P08727 400 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 ODC1P11926 461 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 PTPN2P17706 415 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 GARTP22102 1010 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 POLR2BP30876 1174 aaKnown RBP13.53□□□□□ -0.24
SMAD3-208ENST00000558827 HOXA9P31269 272 aa13.53□□□□□ -0.24
SMAD3-208ENST00000558827 AARSP49588 968 aaKnown RBP eCLIP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms