RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 FGFR4P22455 802 aa13.87□□□□□ -0.19
SMAD3-207ENST00000558763 HOXA11P31270 313 aaPredicted RBP13.87□□□□□ -0.19
SMAD3-207ENST00000558763 NOP2P46087 812 aaKnown RBP13.87□□□□□ -0.19
SMAD3-207ENST00000558763 POU5F1Q01860 360 aaKnown RBP13.87□□□□□ -0.19
SMAD3-207ENST00000558763 CKAP4Q07065 602 aaKnown RBP13.87□□□□□ -0.19
SMAD3-207ENST00000558763 SLC10A6Q3KNW5 377 aa13.87□□□□□ -0.19
SMAD3-207ENST00000558763 NT5DC3Q86UY8 548 aa13.87□□□□□ -0.19
SMAD3-207ENST00000558763 ANKLE1Q8NAG6 615 aa13.87□□□□□ -0.19
SMAD3-207ENST00000558763 FAM212AQ96EL1 285 aa13.87□□□□□ -0.19
SMAD3-207ENST00000558763 LACTBL1A8MY62 500 aa13.86□□□□□ -0.19
SMAD3-207ENST00000558763 MTA2O94776 668 aa13.86□□□□□ -0.19
SMAD3-207ENST00000558763 IL18RAPO95256 599 aa13.86□□□□□ -0.19
SMAD3-207ENST00000558763 UNGP13051 313 aaPredicted RBP13.86□□□□□ -0.19
SMAD3-207ENST00000558763 TBXAS1P24557 533 aaPredicted RBP13.86□□□□□ -0.19
SMAD3-207ENST00000558763 TFAMQ00059 246 aaKnown RBP13.86□□□□□ -0.19
SMAD3-207ENST00000558763 IFI16Q16666 785 aaKnown RBP13.86□□□□□ -0.19
SMAD3-207ENST00000558763 CLEC16AQ2KHT3 1053 aa13.86□□□□□ -0.19
SMAD3-207ENST00000558763 C1orf127Q8N9H9 656 aa13.86□□□□□ -0.19
SMAD3-207ENST00000558763 RPGRIP1Q96KN7 1286 aa13.86□□□□□ -0.19
SMAD3-207ENST00000558763 OSMRQ99650 979 aa13.86□□□□□ -0.19
SMAD3-207ENST00000558763 RAB21Q9UL25 225 aa13.86□□□□□ -0.19
SMAD3-207ENST00000558763 PCDHB2Q9Y5E7 798 aa13.86□□□□□ -0.19
SMAD3-207ENST00000558763 ATMINO43313 823 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-207ENST00000558763 PHACTR2O75167 634 aa13.85□□□□□ -0.19
SMAD3-207ENST00000558763 CFHP08603 1231 aa13.85□□□□□ -0.19
SMAD3-207ENST00000558763 EN2P19622 333 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-207ENST00000558763 THPOP40225 353 aa13.85□□□□□ -0.19
SMAD3-207ENST00000558763 ASPAP45381 313 aa13.85□□□□□ -0.19
SMAD3-207ENST00000558763 CDK7P50613 346 aa13.85□□□□□ -0.19
SMAD3-207ENST00000558763 COL13A1Q5TAT6 717 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-207ENST00000558763 SLC39A5Q6ZMH5 540 aa13.85□□□□□ -0.19
SMAD3-207ENST00000558763 FAM126BQ8IXS8 530 aa13.85□□□□□ -0.19
SMAD3-207ENST00000558763 TMEM40Q8WWA1 233 aa13.85□□□□□ -0.19
SMAD3-207ENST00000558763 HES6Q96HZ4 224 aa13.85□□□□□ -0.19
SMAD3-207ENST00000558763 MS4A14Q96JA4 679 aa13.85□□□□□ -0.19
SMAD3-207ENST00000558763 C11orf49Q9H6J7 331 aa13.85□□□□□ -0.19
SMAD3-207ENST00000558763 RPF1Q9H9Y2 349 aaKnown RBP13.85□□□□□ -0.19
SMAD3-207ENST00000558763 CYP1A1P04798 512 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-207ENST00000558763 CYP1A2P05177 515 aa13.85□□□□□ -0.19
SMAD3-207ENST00000558763 TUBB4BP68371 445 aa13.85□□□□□ -0.19
SMAD3-207ENST00000558763 C2orf54Q08AI8 447 aa13.85□□□□□ -0.19
SMAD3-207ENST00000558763 PTK7Q13308 1070 aa13.85□□□□□ -0.19
SMAD3-207ENST00000558763 PTPROQ16827 1216 aa13.85□□□□□ -0.19
SMAD3-207ENST00000558763 TMEM132AQ24JP5 1023 aa13.85□□□□□ -0.19
SMAD3-207ENST00000558763 JADE1Q6IE81 842 aa13.85□□□□□ -0.19
SMAD3-207ENST00000558763 TMEM270Q6UE05 265 aa13.85□□□□□ -0.19
SMAD3-207ENST00000558763 RSPH3Q86UC2 560 aa13.85□□□□□ -0.19
SMAD3-207ENST00000558763 ZNF677Q86XU0 584 aa13.85□□□□□ -0.19
SMAD3-207ENST00000558763 RBBP8NLQ8NC74 664 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-207ENST00000558763 SPATA4Q8NEY3 305 aa13.85□□□□□ -0.19
SMAD3-207ENST00000558763 NIF3L1Q9GZT8 377 aa13.85□□□□□ -0.19
SMAD3-207ENST00000558763 CHORDC1Q9UHD1 332 aaPredicted RBP13.85□□□□□ -0.19
SMAD3-207ENST00000558763 SCN1AP35498 2009 aa13.84□□□□□ -0.19
SMAD3-207ENST00000558763 CES2O00748 559 aa13.84□□□□□ -0.19
SMAD3-207ENST00000558763 TMEM191BP0C7N4 346 aa13.84□□□□□ -0.19
SMAD3-207ENST00000558763 DARSP14868 501 aaKnown RBP13.84□□□□□ -0.19
SMAD3-207ENST00000558763 GPC5P78333 572 aa13.84□□□□□ -0.19
SMAD3-207ENST00000558763 MRPS6P82932 125 aaKnown RBP13.84□□□□□ -0.19
SMAD3-207ENST00000558763 SGSM1Q2NKQ1 1148 aa13.84□□□□□ -0.19
SMAD3-207ENST00000558763 TRIM60Q495X7 471 aa13.84□□□□□ -0.19
SMAD3-207ENST00000558763 ACAD10Q6JQN1 1059 aa13.84□□□□□ -0.19
SMAD3-207ENST00000558763 MTERF4Q7Z6M4 381 aaKnown RBP13.84□□□□□ -0.19
SMAD3-207ENST00000558763 RHOT2Q8IXI1 618 aa13.84□□□□□ -0.19
SMAD3-207ENST00000558763 ZSWIM1Q9BR11 485 aa13.84□□□□□ -0.19
SMAD3-207ENST00000558763 CXCL16Q9H2A7 254 aa13.84□□□□□ -0.19
SMAD3-207ENST00000558763 GTF3C4Q9UKN8 822 aa13.84□□□□□ -0.19
SMAD3-207ENST00000558763 PCDHB4Q9Y5E5 795 aa13.84□□□□□ -0.19
SMAD3-207ENST00000558763 M0QZ92 97 aa13.83□□□□□ -0.19
SMAD3-207ENST00000558763 DDX3YO15523 660 aaKnown RBP13.83□□□□□ -0.19
SMAD3-207ENST00000558763 ERLIN2O94905 339 aa13.83□□□□□ -0.19
SMAD3-207ENST00000558763 ZRANB2O95218 330 aaKnown RBP eCLIP13.83□□□□□ -0.19
SMAD3-207ENST00000558763 RHOXF2BP0C7M4 288 aa13.83□□□□□ -0.19
SMAD3-207ENST00000558763 DNA2P51530 1060 aa13.83□□□□□ -0.19
SMAD3-207ENST00000558763 CENPCQ03188 943 aa13.83□□□□□ -0.19
SMAD3-207ENST00000558763 RPS6KA1Q15418 735 aa13.83□□□□□ -0.19
SMAD3-207ENST00000558763 C11orf63Q6NUN7 778 aa13.83□□□□□ -0.19
SMAD3-207ENST00000558763 NECAB2Q7Z6G3 386 aa13.83□□□□□ -0.19
SMAD3-207ENST00000558763 DAAM2Q86T65 1068 aa13.83□□□□□ -0.19
SMAD3-207ENST00000558763 NME8Q8N427 588 aa13.83□□□□□ -0.19
SMAD3-207ENST00000558763 MMGT1Q8N4V1 131 aa13.83□□□□□ -0.19
SMAD3-207ENST00000558763 CAGE1Q8TC20 777 aa13.83□□□□□ -0.19
SMAD3-207ENST00000558763 ANKRD36BP1Q96IX9 119 aa13.83□□□□□ -0.19
SMAD3-207ENST00000558763 RHOXF2Q9BQY4 288 aa13.83□□□□□ -0.19
SMAD3-207ENST00000558763 IMPG2Q9BZV3 1241 aa13.83□□□□□ -0.19
SMAD3-207ENST00000558763 ASB7Q9H672 318 aa13.83□□□□□ -0.19
SMAD3-207ENST00000558763 ATP11BQ9Y2G3 1177 aa13.83□□□□□ -0.19
SMAD3-207ENST00000558763 CDY2AQ9Y6F7 541 aa13.83□□□□□ -0.19
SMAD3-207ENST00000558763 MROH7Q68CQ1 1323 aa13.83□□□□□ -0.19
SMAD3-207ENST00000558763 TNNC2P02585 160 aa13.83□□□□□ -0.2
SMAD3-207ENST00000558763 GNA15P30679 374 aa13.83□□□□□ -0.2
SMAD3-207ENST00000558763 GRM5P41594 1212 aa13.83□□□□□ -0.2
SMAD3-207ENST00000558763 BPIFB4P59827 614 aa13.83□□□□□ -0.2
SMAD3-207ENST00000558763 NOMO3P69849 1222 aa13.83□□□□□ -0.2
SMAD3-207ENST00000558763 ZNF699Q32M78 642 aa13.83□□□□□ -0.2
SMAD3-207ENST00000558763 DCAF12L1Q5VU92 463 aa13.83□□□□□ -0.2
SMAD3-207ENST00000558763 PEX26Q7Z412 305 aa13.83□□□□□ -0.2
SMAD3-207ENST00000558763 SYCE1Q8N0S2 351 aa13.83□□□□□ -0.2
SMAD3-207ENST00000558763 SEZ6LQ9BYH1 1024 aa13.83□□□□□ -0.2
SMAD3-207ENST00000558763 BCO2Q9BYV7 579 aa13.83□□□□□ -0.2
SMAD3-207ENST00000558763 CELF4Q9BZC1 486 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms