RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 FAM84AQ96KN4 292 aa16.82■□□□□ 0.28
LINC01220-201ENST00000558575 GZF1Q9H116 711 aaPredicted RBP16.82■□□□□ 0.28
LINC01220-201ENST00000558575 DLL3Q9NYJ7 618 aa16.82■□□□□ 0.28
LINC01220-201ENST00000558575 KIF20AO95235 890 aa16.81■□□□□ 0.28
LINC01220-201ENST00000558575 LMNAP02545 664 aaKnown RBP16.81■□□□□ 0.28
LINC01220-201ENST00000558575 NR3C1P04150 777 aa16.81■□□□□ 0.28
LINC01220-201ENST00000558575 NFICP08651 508 aa16.81■□□□□ 0.28
LINC01220-201ENST00000558575 AOC1P19801 751 aa16.81■□□□□ 0.28
LINC01220-201ENST00000558575 GUCY2FP51841 1108 aa16.81■□□□□ 0.28
LINC01220-201ENST00000558575 PPP2R3AQ06190 1150 aa16.81■□□□□ 0.28
LINC01220-201ENST00000558575 NFIL3Q16649 462 aa16.81■□□□□ 0.28
LINC01220-201ENST00000558575 PLPP4Q5VZY2 271 aa16.81■□□□□ 0.28
LINC01220-201ENST00000558575 ANKRD40Q6AI12 368 aa16.81■□□□□ 0.28
LINC01220-201ENST00000558575 RBM43Q6ZSC3 357 aaKnown RBP16.81■□□□□ 0.28
LINC01220-201ENST00000558575 CD302Q8IX05 232 aa16.81■□□□□ 0.28
LINC01220-201ENST00000558575 EFCAB13Q8IY85 973 aa16.81■□□□□ 0.28
LINC01220-201ENST00000558575 GOLGA5Q8TBA6 731 aa16.81■□□□□ 0.28
LINC01220-201ENST00000558575 PLEKHO2Q8TD55 490 aa16.81■□□□□ 0.28
LINC01220-201ENST00000558575 ASB7Q9H672 318 aa16.81■□□□□ 0.28
LINC01220-201ENST00000558575 PDE11AQ9HCR9 933 aa16.81■□□□□ 0.28
LINC01220-201ENST00000558575 TUBGCP4Q9UGJ1 667 aa16.81■□□□□ 0.28
LINC01220-201ENST00000558575 ZNF233A6NK53 670 aa16.8■□□□□ 0.28
LINC01220-201ENST00000558575 HIDE1A8MVS5 230 aa16.8■□□□□ 0.28
LINC01220-201ENST00000558575 MBD3O95983 291 aa16.8■□□□□ 0.28
LINC01220-201ENST00000558575 SRGAP2BP0DMP2 458 aa16.8■□□□□ 0.28
LINC01220-201ENST00000558575 CLCNKBP51801 687 aa16.8■□□□□ 0.28
LINC01220-201ENST00000558575 MYBPC2Q14324 1141 aa16.8■□□□□ 0.28
LINC01220-201ENST00000558575 SNRNP35Q16560 246 aaKnown RBP16.8■□□□□ 0.28
LINC01220-201ENST00000558575 UPP1Q16831 310 aa16.8■□□□□ 0.28
LINC01220-201ENST00000558575 SPATA1Q5VX52 437 aa16.8■□□□□ 0.28
LINC01220-201ENST00000558575 TAS1R1Q7RTX1 841 aa16.8■□□□□ 0.28
LINC01220-201ENST00000558575 TRIML1Q8N9V2 468 aa16.8■□□□□ 0.28
LINC01220-201ENST00000558575 DTWD2Q8NBA8 298 aa16.8■□□□□ 0.28
LINC01220-201ENST00000558575 C3orf58Q8NDZ4 430 aa16.8■□□□□ 0.28
LINC01220-201ENST00000558575 NOC3LQ8WTT2 800 aaKnown RBP16.8■□□□□ 0.28
LINC01220-201ENST00000558575 KIF12Q96FN5 646 aa16.8■□□□□ 0.28
LINC01220-201ENST00000558575 MED15Q96RN5 788 aa16.8■□□□□ 0.28
LINC01220-201ENST00000558575 GTPBP4Q9BZE4 634 aaKnown RBP16.8■□□□□ 0.28
LINC01220-201ENST00000558575 KIAA1586Q9HCI6 787 aa16.8■□□□□ 0.28
LINC01220-201ENST00000558575 RBAKQ9NYW8 714 aaPredicted RBP16.8■□□□□ 0.28
LINC01220-201ENST00000558575 R4GN57 208 aa16.8■□□□□ 0.28
LINC01220-201ENST00000558575 TRIM49BA6NDI0 452 aa16.79■□□□□ 0.28
LINC01220-201ENST00000558575 CALUO43852 315 aaPredicted RBP16.79■□□□□ 0.28
LINC01220-201ENST00000558575 EXOC3O60645 756 aa16.79■□□□□ 0.28
LINC01220-201ENST00000558575 IL18RAPO95256 599 aa16.79■□□□□ 0.28
LINC01220-201ENST00000558575 HOXB8P17481 243 aaPredicted RBP16.79■□□□□ 0.28
LINC01220-201ENST00000558575 CYP3A5P20815 502 aa16.79■□□□□ 0.28
LINC01220-201ENST00000558575 PPM1AP35813 382 aa16.79■□□□□ 0.28
LINC01220-201ENST00000558575 CYP24A1Q07973 514 aa16.79■□□□□ 0.28
LINC01220-201ENST00000558575 HSP90AA2PQ14568 343 aaPredicted RBP16.79■□□□□ 0.28
LINC01220-201ENST00000558575 DCLRE1AQ6PJP8 1040 aa16.79■□□□□ 0.28
LINC01220-201ENST00000558575 DDX53Q86TM3 631 aaKnown RBP16.79■□□□□ 0.28
LINC01220-201ENST00000558575 RNF168Q8IYW5 571 aaPredicted RBP16.79■□□□□ 0.28
LINC01220-201ENST00000558575 EEF2KMTQ96G04 330 aa16.79■□□□□ 0.28
LINC01220-201ENST00000558575 DHTKD1Q96HY7 919 aaPredicted RBP16.79■□□□□ 0.28
LINC01220-201ENST00000558575 TSPAN18Q96SJ8 248 aa16.79■□□□□ 0.28
LINC01220-201ENST00000558575 COLEC11Q9BWP8 271 aa16.79■□□□□ 0.28
LINC01220-201ENST00000558575 GPR62Q9BZJ7 368 aa16.79■□□□□ 0.28
LINC01220-201ENST00000558575 SLC38A7Q9NVC3 462 aa16.79■□□□□ 0.28
LINC01220-201ENST00000558575 TMEM63CQ9P1W3 806 aa16.79■□□□□ 0.28
LINC01220-201ENST00000558575 UBQLN1Q9UMX0 589 aaKnown RBP16.79■□□□□ 0.28
LINC01220-201ENST00000558575 LZTS1Q9Y250 596 aa16.79■□□□□ 0.28
LINC01220-201ENST00000558575 DERAQ9Y315 318 aa16.79■□□□□ 0.28
LINC01220-201ENST00000558575 MIA3Q5JRA6 1907 aa16.78■□□□□ 0.28
LINC01220-201ENST00000558575 PTPRJQ12913 1337 aa16.78■□□□□ 0.28
LINC01220-201ENST00000558575 PPEF2O14830 753 aa16.78■□□□□ 0.28
LINC01220-201ENST00000558575 AKAP3O75969 853 aa16.78■□□□□ 0.28
LINC01220-201ENST00000558575 KIF4AO95239 1232 aa16.78■□□□□ 0.28
LINC01220-201ENST00000558575 WEE2P0C1S8 567 aa16.78■□□□□ 0.28
LINC01220-201ENST00000558575 CCNE1P24864 410 aa16.78■□□□□ 0.28
LINC01220-201ENST00000558575 LRPAP1P30533 357 aa16.78■□□□□ 0.28
LINC01220-201ENST00000558575 TMEM132DQ14C87 1099 aa16.78■□□□□ 0.28
LINC01220-201ENST00000558575 EDRF1Q3B7T1 1238 aa16.78■□□□□ 0.28
LINC01220-201ENST00000558575 PDE12Q6L8Q7 609 aaKnown RBP16.78■□□□□ 0.28
LINC01220-201ENST00000558575 ZC3H3Q8IXZ2 948 aaKnown RBP16.78■□□□□ 0.28
LINC01220-201ENST00000558575 CXorf38Q8TB03 319 aa16.78■□□□□ 0.28
LINC01220-201ENST00000558575 ZNF516Q92618 1163 aa16.78■□□□□ 0.28
LINC01220-201ENST00000558575 TMEM169Q96HH4 297 aa16.78■□□□□ 0.28
LINC01220-201ENST00000558575 DUSP9Q99956 384 aaKnown RBP16.78■□□□□ 0.28
LINC01220-201ENST00000558575 LIMD1Q9UGP4 676 aa16.78■□□□□ 0.28
LINC01220-201ENST00000558575 C2CD2Q9Y426 696 aa16.78■□□□□ 0.28
LINC01220-201ENST00000558575 CITO14578 2027 aa16.78■□□□□ 0.28
LINC01220-201ENST00000558575 PATJQ8NI35 1801 aa16.77■□□□□ 0.28
LINC01220-201ENST00000558575 CARNS1A5YM72 827 aa16.77■□□□□ 0.28
LINC01220-201ENST00000558575 TMEM189-UBE2V1I3L0A0 370 aa16.77■□□□□ 0.28
LINC01220-201ENST00000558575 PODXLO00592 558 aa16.77■□□□□ 0.28
LINC01220-201ENST00000558575 NR2F2P24468 414 aa16.77■□□□□ 0.28
LINC01220-201ENST00000558575 RPL9P32969 192 aaKnown RBP16.77■□□□□ 0.28
LINC01220-201ENST00000558575 MCCD1P59942 119 aaPredicted RBP16.77■□□□□ 0.28
LINC01220-201ENST00000558575 KRT17Q04695 432 aa16.77■□□□□ 0.28
LINC01220-201ENST00000558575 ADAM9Q13443 819 aa16.77■□□□□ 0.28
LINC01220-201ENST00000558575 PSMD6Q15008 389 aa16.77■□□□□ 0.28
LINC01220-201ENST00000558575 LMBRD2Q68DH5 695 aaPredicted RBP16.77■□□□□ 0.28
LINC01220-201ENST00000558575 KLHL10Q6JEL2 608 aa16.77■□□□□ 0.28
LINC01220-201ENST00000558575 TTI2Q6NXR4 508 aa16.77■□□□□ 0.28
LINC01220-201ENST00000558575 ZDHHC14Q8IZN3 488 aa16.77■□□□□ 0.28
LINC01220-201ENST00000558575 DCLK2Q8N568 766 aa16.77■□□□□ 0.28
LINC01220-201ENST00000558575 OR5B17Q8NGF7 314 aa16.77■□□□□ 0.28
LINC01220-201ENST00000558575 HASPINQ8TF76 798 aa16.77■□□□□ 0.28
LINC01220-201ENST00000558575 DDX27Q96GQ7 796 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms