RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 ZBTB41Q5SVQ8 909 aa12.2□□□□□ -0.46
RABGGTA-204ENST00000558376 TANGO2Q6ICL3 276 aa12.2□□□□□ -0.46
RABGGTA-204ENST00000558376 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.2□□□□□ -0.46
RABGGTA-204ENST00000558376 TPRG1Q6ZUI0 275 aa12.2□□□□□ -0.46
RABGGTA-204ENST00000558376 DHX40Q8IX18 779 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-204ENST00000558376 ZBTB44Q8NCP5 570 aa12.2□□□□□ -0.46
RABGGTA-204ENST00000558376 ATRIPQ8WXE1 791 aa12.2□□□□□ -0.46
RABGGTA-204ENST00000558376 CCDC43Q96MW1 224 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-204ENST00000558376 MTRRQ9UBK8 725 aa12.2□□□□□ -0.46
RABGGTA-204ENST00000558376 GDAQ9Y2T3 454 aa12.2□□□□□ -0.46
RABGGTA-204ENST00000558376 ATXN1P54253 815 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 PDXDC1Q6P996 788 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 ZBTB8OSQ8IWT0 167 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 CNTNAP3BQ96NU0 1288 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 PYM1Q9BRP8 204 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 CNTNAP3Q9BZ76 1288 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 CCDC113Q9H0I3 377 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 POLD4Q9HCU8 107 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 ZSCAN32Q9NX65 697 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 MAPK8IP1Q9UQF2 711 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 MRPS23Q9Y3D9 190 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 PCDHGA2Q9Y5H1 932 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 MAP1BP46821 2468 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 MYMKA6NI61 221 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 I3L4J1 428 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 NRG2O14511 850 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 ECI2O75521 394 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 SMC2O95347 1197 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 RPN1P04843 607 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 PRKCBP05771 671 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 RHOP08100 348 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 CD44P16070 742 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 TGM1P22735 817 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 TKTP29401 623 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 PRPF4BQ13523 1007 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 TMEM119Q4V9L6 283 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 DYMQ7RTS9 669 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 AOPEPQ8N6M6 819 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 MCPH1Q8NEM0 835 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 HPS3Q969F9 1004 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 BORCS6Q96GS4 357 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 PPP1R10Q96QC0 940 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 HEBP1Q9NRV9 189 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 SMG5Q9UPR3 1016 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 BACE2Q9Y5Z0 518 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 CDY1Q9Y6F8 540 aa12.19□□□□□ -0.46
RABGGTA-204ENST00000558376 NPHP3-ACAD11A0A0J9YXS1 232 aa12.18□□□□□ -0.46
RABGGTA-204ENST00000558376 TMEM189-UBE2V1I3L0A0 370 aa12.18□□□□□ -0.46
RABGGTA-204ENST00000558376 ACKR2O00590 384 aa12.18□□□□□ -0.46
RABGGTA-204ENST00000558376 KRT37O76014 449 aa12.18□□□□□ -0.46
RABGGTA-204ENST00000558376 B3GAT3O94766 335 aa12.18□□□□□ -0.46
RABGGTA-204ENST00000558376 CEBPBP17676 345 aa12.18□□□□□ -0.46
RABGGTA-204ENST00000558376 MAGEA9P43362 315 aa12.18□□□□□ -0.46
RABGGTA-204ENST00000558376 BRCC3P46736 316 aa12.18□□□□□ -0.46
RABGGTA-204ENST00000558376 CLCNKBP51801 687 aa12.18□□□□□ -0.46
RABGGTA-204ENST00000558376 RAD51AP2Q09MP3 1159 aa12.18□□□□□ -0.46
RABGGTA-204ENST00000558376 MAPK6Q16659 721 aa12.18□□□□□ -0.46
RABGGTA-204ENST00000558376 GLRA4Q5JXX5 417 aa12.18□□□□□ -0.46
RABGGTA-204ENST00000558376 SV2BQ7L1I2 683 aa12.18□□□□□ -0.46
RABGGTA-204ENST00000558376 ZNF687Q8N1G0 1237 aa12.18□□□□□ -0.46
RABGGTA-204ENST00000558376 C3orf58Q8NDZ4 430 aa12.18□□□□□ -0.46
RABGGTA-204ENST00000558376 LARP4BQ92615 738 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-204ENST00000558376 RAD54LQ92698 747 aa12.18□□□□□ -0.46
RABGGTA-204ENST00000558376 DDX27Q96GQ7 796 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-204ENST00000558376 CCDC34Q96HJ3 373 aa12.18□□□□□ -0.46
RABGGTA-204ENST00000558376 MED15Q96RN5 788 aa12.18□□□□□ -0.46
RABGGTA-204ENST00000558376 NELL2Q99435 816 aa12.18□□□□□ -0.46
RABGGTA-204ENST00000558376 EPC1Q9H2F5 836 aa12.18□□□□□ -0.46
RABGGTA-204ENST00000558376 CHD8Q9HCK8 2581 aa12.18□□□□□ -0.46
RABGGTA-204ENST00000558376 RALGAPA1Q6GYQ0 2036 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 KLRC4O43908 158 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 CYP11B2P19099 503 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 FCARP24071 287 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 RPS9P46781 194 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 CACNB1Q02641 598 aaPredicted RBP12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 MTAPQ13126 283 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 TMEM132AQ24JP5 1023 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 KMT5BQ4FZB7 885 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 RTL10Q7L3V2 364 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 TCEAL4Q96EI5 215 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 GSDMAQ96QA5 445 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 KIFC3Q9BVG8 833 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 TRIM9Q9C026 710 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 C2orf40Q9H1Z8 148 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 GOLGA2P5Q9HBQ8 144 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 TUFT1Q9NNX1 390 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 PARD6AQ9NPB6 346 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 PRMT8Q9NR22 394 aaPredicted RBP12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 GDE1Q9NZC3 331 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 CNOT1A5YKK6 2376 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 SDK1Q7Z5N4 2213 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 ARHGEF37A1IGU5 675 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 BECN2A8MW95 431 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 TDGF1P13385 188 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 RPA1P27694 616 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 SOX4Q06945 474 aaPredicted RBP12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 GRM2Q14416 872 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 NCAPHQ15003 741 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 UPP1Q16831 310 aa12.17□□□□□ -0.46
RABGGTA-204ENST00000558376 HSP90AA4PQ58FG1 418 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms